Three-dimensional extinction mapping using Gaussian random fields

We present a scheme for using stellar catalogues to map the three-dimensional distributions of extinction and dust within our Galaxy. Extinction is modelled as a Gaussian random field, whose covariance function is set by a simple physical model of the ISM that assumes a Kolmogorov-like power spectrum of turbulent fluctuations. As extinction is modelled as a random field, the spatial resolution of the resulting maps is set naturally by the data available; there is no need to impose any spatial binning. We verify the validity of our scheme by testing it on simulated extinction fields and show that its precision is significantly improved over previous dust-mapping efforts. The approach we describe here can make use of any photometric, spectroscopic or astrometric data; it is not limited to any particular survey. Consequently, it can be applied to a wide range of data from both existing and future surveys.Comment: 16 pages, 12 figures. Submitted for publication in MNRAS. Text revise

Marginal likelihoods of distances and extinctions to stars: computation and compact representation

We present a method for obtaining the likelihood function of distance and extinction to a star given its photometry. The other properties of the star (its mass, age, metallicity and so on) are marginalised assuming a simple Galaxy model. We demonstrate that the resulting marginalised likelihood function can be described faithfully and compactly using a Gaussian mixture model. For dust mapping applications we strongly advocate using monochromatic over bandpass extinctions, and provide tables for converting from the former to the latter for different stellar types.Comment: 14 pages, 12 figures. Accepted for publication in MNRAS. Source code is available at https://github.com/stuartsal

A New four-toed mongoose from Kenya, Bdeogale Crassicauda Nigrwscens, ssp. nov.

Volume: XXVII

PrimPol is required for replicative tolerance of G quadruplexes in vertebrate cells

G quadruplexes (G4s) can present potent blocks to DNA replication. Accurate and timely replication of G4s in vertebrates requires multiple specialized DNA helicases and polymerases to prevent genetic and epigenetic instability. Here we report that PrimPol, a recently described primase-polymerase (PrimPol), plays a crucial role in the bypass of leading strand G4 structures. While PrimPol is unable to directly replicate G4s, it can bind and reprime downstream of these structures. Disruption of either the catalytic activity or zinc-finger of PrimPol results in extreme G4-dependent epigenetic instability at the BU-1 locus in avian DT40 cells, indicative of extensive uncoupling of the replicative helicase and polymerase. Together, these observations implicate PrimPol in promoting restart of DNA synthesis downstream of, but closely coupled to, G4 replication impediments

Vertebrate DNA damage tolerance requires the C-terminus but not BRCT or transferase domains of REV1

REV1 is central to the DNA damage response of eukaryotes through an as yet poorly understood role in translesion synthesis. REV1 is a member of the Y-type DNA polymerase family and is capable of in vitro deoxycytidyl transferase activity opposite a range of damaged bases. However, non-catalytic roles for REV1 have been suggested by the Saccharomyces cerevisiae rev1-1 mutant, which carries a point mutation in the N-terminal BRCT domain, and the recently demonstrated ability of the mammalian protein to interact with each of the other translesion polymerases via its extreme C-terminus. Here, we show that a region adjacent to this polymerase interacting domain mediates an interaction with PCNA. These C-terminal domains of REV1 are necessary, although not sufficient, for effective tolerance of DNA damage in the avian cell line DT40, while the BRCT domain and transferase activity are not directly required. Together these data provide strong support for REV1 playing an important non-catalytic role in coordinating translesion synthesis. Further, unlike in budding yeast, rad18 is not epistatic to rev1 for DNA damage tolerance suggesting that REV1 and RAD18 play largely independent roles in the control of vertebrate translesion synthesis

A 3D extinction map of the northern Galactic plane based on IPHAS photometry

This article has been accepted for publication in Monthly Notices of the Royal Astronomical Society. ©: 2014 The Author(s). Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved.We present a 3D map of extinction in the northern Galactic plane derived using photometry from the INT/WFC Photometric Hα Survey of the northern Galactic plane. The map has fine angular (~10 arcmin) and distance (100 pc) sampling allied to a significant depth (≳5 kpc). We construct the map using a method based on a hierarchical Bayesian model described in a previous article by Sale. In addition to mean extinction, we also measure differential extinction, which arises from the fractal nature of the interstellar medium, and show that it will be the dominant source of uncertainty in estimates of extinction to some arbitrary position. The method applied also furnishes us with photometric estimates of the distance, extinction, effective temperature, surface gravity, and mass for ~38 million stars. Both the extinction map and the catalogue of stellar parameters are made publicly available via http://www.iphas.org/extinction.Peer reviewe

Measurement of the cross-section ratio 3H(d,γ)5He/3H(d,α)n at 100 keV

The cross-section ratio for 3H(d,γ)5He relative to 3H(d,α)n has been measured at an effective deuteron bombarding energy of 100 keV with a NaI pair spectrometer and a tritiated-titanium target. The ratio was determined to be (1.2±0.3)×10^-4 by comparing the spectra and count rates for 3H(d,γ)5He and 3H(d,α)n with 2H(3He,γ)5Li and 2H(3He,α)1H

The KRAB Zinc Finger Protein Roma/Zfp157 Is a Critical Regulator of Cell-Cycle Progression and Genomic Stability.

Regulation of DNA replication and cell division is essential for tissue growth and maintenance of genomic integrity and is particularly important in tissues that undergo continuous regeneration such as mammary glands. We have previously shown that disruption of the KRAB-domain zinc finger protein Roma/Zfp157 results in hyperproliferation of mammary epithelial cells (MECs) during pregnancy. Here, we delineate the mechanism by which Roma engenders this phenotype. Ablation of Roma in MECs leads to unscheduled proliferation, replication stress, DNA damage, and genomic instability. Furthermore, mouse embryonic fibroblasts (MEFs) depleted for Roma exhibit downregulation of p21Cip1 and geminin and have accelerated replication fork velocities, which is accompanied by a high rate of mitotic errors and polyploidy. In contrast, overexpression of Roma in MECs halts cell-cycle progression, whereas siRNA-mediated p21Cip1 knockdown ameliorates, in part, this phenotype. Thus, Roma is an essential regulator of the cell cycle and is required to maintain genomic stability.This work was supported by a PhD studentship from A*STAR Singapore to T.L.F.H. and funding from the Medical Research Council to C.J.W. G.G. and J.E.S. are supported by an MRC core grant to LMB (U105178808).This is the final version of the article. It first appeared from Cell Press via http://dx.doi.org/10.1016/j.celrep.2016.03.07

Calibrated and completeness-corrected optical stellar density maps of the Northern Galactic Plane

© The Author 2016. Published by Oxford University Press on behalf of The Royal Astronomical Society. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.Following on from the second release of calibrated photometry from IPHAS, the INT/WFC Photometric Hα Survey of the Northern Galactic Plane, we present incompleteness-corrected stellar density maps in the r and i photometric bands. These have been computed to a range of limiting magnitudes reaching to 20th magnitude in r and 19th in i (Vega system), and with different angular resolutions – the highest resolution available being 1 arcmin2. The maps obtained cover 94 per cent of the 1800 square degree IPHAS footprint, spanning the Galactic latitude range, −5◦ < b < +5◦, north of the celestial equator. The corrections for incompleteness, due to confusion and sensitivity loss at the faint limit, have been deduced by the method of artificial source injection. The presentation of this method is preceded by a discussion of other more approximate methods of determining completeness. Our method takes full account of position-dependent seeing and source ellipticity in the survey data base. The application of the star counts to testing reddened Galactic disc models is previewed by a comparison with predicted counts along three constant-longitude cuts at 30◦, 90◦ and 175◦: some overprediction of the most heavily reddened 30◦ counts is found, alongside good agreement at 90◦ and 175◦. KeyPeer reviewedFinal Published versio