Exploration of a Polarized Surface Bidirectional Reflectance Model Using the Ground-Based Multiangle Spectropolarimetric Imager

Accurate characterization of surface reflection is essential for retrieval of aerosols using downward-looking remote sensors. In this paper, observations from the Ground-based Multiangle SpectroPolarimetric Imager (GroundMSPI) are used to evaluate a surface polarized bidirectional reflectance distribution function (PBRDF) model. GroundMSPI is an eight-band spectropolarimetric camera mounted on a rotating gimbal to acquire pushbroom imagery of outdoor landscapes. The camera uses a very accurate photoelastic-modulator-based polarimetric imaging technique to acquire Stokes vector measurements in three of the instrument's bands (470, 660, and 865 nm). A description of the instrument is presented, and observations of selected targets within a scene acquired on 6 January 2010 are analyzed. Data collected during the course of the day as the Sun moved across the sky provided a range of illumination geometries that facilitated evaluation of the surface model, which is comprised of a volumetric reflection term represented by the modified Rahman-Pinty-Verstraete function plus a specular reflection term generated by a randomly oriented array of Fresnel-reflecting microfacets. While the model is fairly successful in predicting the polarized reflection from two grass targets in the scene, it does a poorer job for two manmade targets (a parking lot and a truck roof), possibly due to their greater degree of geometric organization. Several empirical adjustments to the model are explored and lead to improved fits to the data. For all targets, the data support the notion of spectral invariance in the angular shape of the unpolarized and polarized surface reflection. As noted by others, this behavior provides valuable constraints on the aerosol retrieval problem, and highlights the importance of multiangle observations.NASAJPLCenter for Space Researc

A Ten-Year Record of Supraglacial Lake Evolution and Rapid Drainage in West Greenland Using an Automated Processing Algorithm for Multispectral Imagery

The rapid drainage of supraglacial lakes introduces large pulses of meltwater to the subglacial environment and creates moulins, surface-to-bed conduits for future melt. Introduction of water to the subglacial system has been shown to affect ice flow, and modeling suggests that variability in water supply and delivery to the subsurface play an important role in the development of the subglacial hydrologic system and its ability to enhance or mitigate ice flow. We developed a fully automated method for tracking meltwater and rapid drainages in large (\u3e 0.125 km2) perennial lakes and applied it to a 10 yr time series of ETM+ and MODIS imagery of an outlet glacier flow band in West Greenland. Results indicate interannual variability in maximum coverage and spatial evolution of total lake area. We identify 238 rapid drainage events, occurring most often at low (\u3c 900 m) and middle (900–1200 m) elevations during periods of net filling or peak lake coverage. We observe a general progression of both lake filling and draining from lower to higher elevations but note that the timing of filling onset, peak coverage, and dissipation are also variable. Lake coverage is sensitive to air temperature, and warm years exhibit greater variability in both coverage evolution and rapid drainage. Mid-elevation drainages in 2011 coincide with large surface velocity increases at nearby GPS sites, though the relationships between ice-shed-scale dynamics and meltwater input are still unclear

Coherent Detector for Near-Angle Scattering and Polarization Characterization of Telescope Mirror Coatings

A report discusses the difficulty of measuring scattering properties of coated mirrors extremely close to the specular reflection peak. A prototype Optical Hetero dyne Near-angle Scatterometer (OHNS) was developed. Light from a long-coherence-length (>150 m) 532-nm laser is split into two arms. Acousto-optic modulators frequency shift the sample and reference beams, establishing a fixed beat frequency between the beams. The sample beam is directed at very high f/# onto a mirror sample, and the point spread function (PSF) formed after the mirror sample is scanned with a pinhole. This light is recombined by a non-polarizing beam splitter and measured through heterodyne detection with a spectrum analyzer. Polarizers control the illuminated and analyzed polarization states, allowing the polarization dependent scatter to be measured. The bidirectional reflective or scattering distribution function is normally measured through use of a scattering goniometer instrument. The instrumental beam width (collection angle span) over which the scatterometer responds is typically many degrees. The OHNS enables measurement at angles as small as the first Airy disk diameter

Method and Apparatus for Measuring Near-Angle Scattering of Mirror Coatings

Disclosed herein is a method of determining the near angle scattering of a sample reflective surface comprising the steps of: a) splitting a beam of light having a coherence length of greater than or equal to about 2 meters into a sample beam and a reference beam; b) frequency shifting both the sample beam and the reference beam to produce a fixed beat frequency between the sample beam and the reference beam; c) directing the sample beam through a focusing lens and onto the sample reflective surface, d) reflecting the sample beam from the sample reflective surface through a detection restriction disposed on a movable stage; e) recombining the sample beam with the reference beam to form a recombined beam, followed by f) directing the recombined beam to a detector and performing heterodyne analysis on the recombined beam to measure the near-angle scattering of the sample reflective surface, wherein the position of the detection restriction relative to the sample beam is varied to occlude at least a portion of the sample beam to measure the near-angle scattering of the sample reflective surface. An apparatus according to the above method is also disclosed

Rabies in North America: A Model of the One Health Approach

The One Health concept merges environmental, wildlife, domestic animal, and human health into a global, interconnected context. Though recently a popular catchphrase due to the emergence and reemergence of diseases such as foot-and-mouth disease (FMD), bluetongue, bovine spongiform encephalopathy (BSE), Q Fever, Rift Valley fever, Nipah virus, West Nile virus (WNV), severe acute respiratory syndrome (SARS), highly pathogenic H5N1 avian influenza, and plague, the One Health concept is not new. The One Health approach to managing infectious diseases aims to promote and implement meaningful collaboration and communication between multiple allied disciplines working locally, nationally, and internationally to attain optimal health for people, domestic animals, wildlife, and our environment. Rabies is an ancient disease that results in more than 55,000 human deaths worldwide each year. Historic and current emphasis on interdisciplinary approaches to rabies control provides a prime example of a zoonotic disease that is being managed more effectively via the One Health approach. In North America, a few meso-carnivores and bats serve as reservoirs of rabies, perpetuating continual infection of humans, pets, and livestock. Increased emphasis on surveillance and control of rabies in wildlife is the key to local, regional, and continental elimination strategies

Measurements and Modeling of Near-Surface Radio Propagation in Glacial Ice and Implications for Neutrino Experiments

We present measurements of radio transmission in the $\sim$100 MHz range through a $\sim100$ m deep region below the surface of the ice at Summit Station, Greenland, called the firn. In the firn, the index of refraction changes due to the transition from snow at the surface to glacial ice below, affecting the propagation of radio signals in that region. We compare our observations to a finite-difference time-domain (FDTD) electromagnetic wave simulation, which supports the existence of three classes of propagation: a bulk propagation ray-bending mode that leads to so-called "shadowed" regions for certain geometries of transmission, a surface-wave mode induced by the ice/air interface, and an arbitrary-depth horizontal propagation mode that requires perturbations from a smooth density gradient. In the non-shadowed region, our measurements are consistent with the bulk propagation ray-bending mode both in timing and in amplitude. We also observe signals in the shadowed region, in conflict with a bulk-propagation-only ray-bending model, but consistent with FDTD simulations using a variety of firn models for Summit Station. The amplitude and timing of our measurements in all geometries are consistent with the predictions from FDTD simulations. In the shadowed region, the amplitude of the observed signals is consistent with a best-fit coupling fraction value of $2.4$% (0.06% in power) or less to a surface or horizontal propagation mode from the bulk propagation mode. The relative amplitude of observable signals in the two regions is important for experiments that aim to detect radio emission from astrophysical high-energy neutrinos interacting in glacial ice, which rely on a radio propagation model to inform simulations and perform event reconstruction.Comment: 14 pages, 13 figures, version accepted to PR

Multiscale Discriminant Saliency for Visual Attention

The bottom-up saliency, an early stage of humans' visual attention, can be considered as a binary classification problem between center and surround classes. Discriminant power of features for the classification is measured as mutual information between features and two classes distribution. The estimated discrepancy of two feature classes very much depends on considered scale levels; then, multi-scale structure and discriminant power are integrated by employing discrete wavelet features and Hidden markov tree (HMT). With wavelet coefficients and Hidden Markov Tree parameters, quad-tree like label structures are constructed and utilized in maximum a posterior probability (MAP) of hidden class variables at corresponding dyadic sub-squares. Then, saliency value for each dyadic square at each scale level is computed with discriminant power principle and the MAP. Finally, across multiple scales is integrated the final saliency map by an information maximization rule. Both standard quantitative tools such as NSS, LCC, AUC and qualitative assessments are used for evaluating the proposed multiscale discriminant saliency method (MDIS) against the well-know information-based saliency method AIM on its Bruce Database wity eye-tracking data. Simulation results are presented and analyzed to verify the validity of MDIS as well as point out its disadvantages for further research direction.Comment: 16 pages, ICCSA 2013 - BIOCA sessio

Phylogenetic and experimental characterization of an acyl-ACP thioesterase family reveals significant diversity in enzymatic specificity and activity

<p>Abstract</p> <p>Background</p> <p>Acyl-acyl carrier protein thioesterases (acyl-ACP TEs) catalyze the hydrolysis of the thioester bond that links the acyl chain to the sulfhydryl group of the phosphopantetheine prosthetic group of ACP. This reaction terminates acyl chain elongation of fatty acid biosynthesis, and in plant seeds it is the biochemical determinant of the fatty acid compositions of storage lipids.</p> <p>Results</p> <p>To explore acyl-ACP TE diversity and to identify novel acyl ACP-TEs, 31 acyl-ACP TEs from wide-ranging phylogenetic sources were characterized to ascertain their <it>in vivo </it>activities and substrate specificities. These acyl-ACP TEs were chosen by two different approaches: 1) 24 TEs were selected from public databases on the basis of phylogenetic analysis and fatty acid profile knowledge of their source organisms; and 2) seven TEs were molecularly cloned from oil palm (<it>Elaeis guineensis</it>), coconut (<it>Cocos nucifera</it>) and <it>Cuphea viscosissima</it>, organisms that produce medium-chain and short-chain fatty acids in their seeds. The <it>in vivo </it>substrate specificities of the acyl-ACP TEs were determined in <it>E. coli</it>. Based on their specificities, these enzymes were clustered into three classes: 1) Class I acyl-ACP TEs act primarily on 14- and 16-carbon acyl-ACP substrates; 2) Class II acyl-ACP TEs have broad substrate specificities, with major activities toward 8- and 14-carbon acyl-ACP substrates; and 3) Class III acyl-ACP TEs act predominantly on 8-carbon acyl-ACPs. Several novel acyl-ACP TEs act on short-chain and unsaturated acyl-ACP or 3-ketoacyl-ACP substrates, indicating the diversity of enzymatic specificity in this enzyme family.</p> <p>Conclusion</p> <p>These acyl-ACP TEs can potentially be used to diversify the fatty acid biosynthesis pathway to produce novel fatty acids.</p

Interspecific oral rabies vaccine bait competition in the Southeast United States

The United States Department of Agriculture’s National Rabies Management Program (NRMP) has coordinated the use of oral rabies vaccination (ORV) to control the spread of raccoon rabies virus variant west of the Appalachian Mountains since 1997. Working with state and local partners, the NRMP deploys ORV baits containing a rabies vaccine, primarily targeting raccoon populations (Procyon lotor). Bait competition between raccoons and non-target species may limit the effectiveness of ORV programs, but the extent of bait competition remains poorly quantified, particularly in the southeastern United States. We placed placebo ORV baits in bottomland hardwood (n = 637 baits) and upland pine (n = 681 baits) habitats in South Carolina, USA during August- December 2019 and used remote cameras to examine bait competition between raccoons and non-target species. The estimated proportion of bait consumed by raccoons was 18.8 ± 2.1% in bottomland hardwood and 11.6 ± 2.1% in upland pine habitats. Vertebrate competition appeared to have a minimal effect on raccoon uptake as estimated consumption did not exceed 5% for any species or 8% of bait uptake events cumulatively. We estimated that raccoons were the primary consumer of baits in bottomland hardwood, whereas invertebrates were the primary consumer in upland pine (26.7 ± 1.3% of baits). Our results indicate a need to closely consider the effects of invertebrates on bait consumption to minimize their potential impact on ORV bait uptake by target species. Uptake probabilities by raccoons were relatively low but not primarily driven by competition with vertebrates. As such, strategies to increase the specificity of raccoon uptake may be needed to enhance the effectiveness of ORV baiting programs