999 research outputs found

    Administrative Law

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    MC-PDFT Can Calculate Singlet-Triplet Splittings of Organic Diradicals.

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    The singlet-triplet splittings of a set of diradical organic molecules are calculated using multiconfiguration pair-density functional theory (MC-PDFT) and the results are compared with those obtained by Kohn-Sham density functional theory (KS-DFT) and complete active space second-order perturbation theory (CASPT2) calculations. We found that MC-PDFT, even with small and systematically defined active spaces, is competitive in accuracy with CASPT2, and it yields results with greater accuracy and precision than Kohn-Sham DFT with the same parent functional. MC-PDFT also avoids the challenges associated with spin contamination in KS-DFT. It is also shown that MC-PDFT is much less computationally expensive than CASPT2 when applied to larger active spaces, and this illustrates the promise of this method for larger diradical organic systems

    Experimental tests of reaction rate theory: Mu+H2 and Mu+D2

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    Copyright @ 1987 American Institute of Physics.Bimolecular rate constants for the thermal chemical reactions of muonium (Mu) with hydrogen and deuterium—Mu+H2→MuH+H and Mu+D2→MuD+D—over the temperature range 473–843 K are reported. The Arrhenius parameters and 1σ uncertainties for the H2 reaction are log A (cm3 molecule-1 s-1)=-9.605±0.074 and Ea =13.29±0.22 kcal mol-1, while for D2 the values are -9.67±0.12 and 14.73±0.40, respectively. These results are significantly more precise than those reported earlier by Garner et al. For the Mu reaction with H2 our results are in excellent agreement with the 3D quantum mechanical calculations of Schatz on the Liu–Siegbahn–Truhlar–Horowitz potential surface, but the data for both reactions compare less favorably with variational transition-state theory, particularly at the lower temperatures.NSERC (Canada) and the Petroleum Research Foundation of the Americal Chemical Society

    Full Correlation in a Multiconfigurational Study of Bimetallic Clusters : Restricted Active Space Pair-Density Functional Theory Study of [2Fe-2S] Systems

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    Iron-sulfur clusters play a variety of important roles in protein chemistry, and understanding the energetics of their spin ladders is an important part of understanding these roles. Computational modeling can offer considerable insight into such problems; however, calculations performed thus far on systems with multiple transition metals have typically either been restricted to a single-configuration representation of the density, as in Kohn-Sham theory, or been limited to correlating excitations only within an active space, as in active-space self-consistent field methods. For greater reliability, a calculation should include full correlation, i.e., not only correlation internal to the active space but also external correlation, and it is desirable to combine this full electron correlation with a multiconfigurational representation of the wave function; but this has been impractical thus far. Here we present an affordable way to do that by using restricted-active-space pair-density functional theory. We show that with this method it is possible to compute the entire spin ladder for systems containing two Fe centers bridged by two S atoms. On the other hand, with second-order perturbation theory only the high-spin states can be computed. A key result is that, in agreement with some experiments, we find a high-spin ground state for a relaxed reduced [Fe2S2(SCH3)4] 3- cluster, which is a novel result in computational studies

    Electron scattering by H2 with and without vibrational excitation. III. Experimental and theoretical study of inelastic scattering

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    The ratios of the differential cross sections (DCS's) for excitation of the first, second, and third vibrational states of H2 in its ground electronic state to the elastic DCS have been measured as a function of scattering angle in the 10°–80° range and impact energy in the 7–81.6-eV range. From these ratios the DCS's corresponding to transitions from the ground to the first two vibrationally excited levels (fundamental and first overtone bands) were obtained by utilizing the elastic cross sections determined in the previous paper (II). In addition, the DCS for excitation of the second overtone band was determined for an impact energy of 10 eV. By angular extrapolation and integration of the DCS's the integral cross sections for the vibrational excitations were also determined. In addition, all these cross sections have been calculated using a quantum-mechanical method based on potential scattering in a plane wave scattering approximation which is described in Part I of this series. The present experimental and theoretical cross sections and previous measurements and calculations are compared. The calculated DCS ratios and the DCS's themselves for the fundamental excitation are in good agreement with experiment at 7 and 10 eV; however, at higher energies the calculated DCS's are generally larger than the experimental ones, at some angles by as much as a factor of 10. The calculated ratio of the DCS for the fundamental excitation to the elastic DCS shows a minimum as a function of angle, in qualitative agreement with the experimental results in the 13.6–81.6-eV energy range. The experimental DCS's for vibrational excitation also show a deep minimum. For excitation of the first overtone vibration, the experimental ratios are an order of magnitude larger than the calculated ones at low energy but in better agreement for the magnitude at higher energy. This discrepancy at low energies is explained in terms of resonance scattering. Our experiments are in good agreement with those of others in the few (low energy) cases where comparison is possible

    Performance of SM8 on a Test To Predict Small-Molecule Solvation Free Energies

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    The SM8 quantum mechanical aqueous continuum solvation model is applied to a 17-molecule test set proposed by Nicholls et al. (J. Med. Chem.2008, 51, 769) to predict free energies of solvation. With the M06-2X density functional, the 6-31G(d) basis set, and CM4M charge model, the root-mean-square error (RMSE) of SM8 is 1.08 kcal mol−1 for aqueous geometries and 1.14 kcal mol−1 for gas-phase geometries. These errors compare favorably with optimal explicit and continuum models reported by Nicholls et al., having RMSEs of 1.33 and 1.87 kcal mol−1, respectively. Other models examined by these workers had RMSEs of 1.5−2.6 kcal mol−1. We also explore the use of other density functionals and charge models with SM8 and the RMSE increases to 1.21 kcal mol−1 for mPW1/CM4 with gas-phase geometries, to 1.50 kcal mol−1 for M06-2X/CM4 with gas-phase geometries, and to 1.27−1.64 kcal mol−1 with three different models at B3LYP gas-phase geometries

    Reaction kinetics of muonium with the halogen gases (F2, Cl2, and Br2)

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    Copyright @ 1989 American Institute of PhysicsBimolecular rate constants for the thermal chemical reactions of muonium (Mu) with the halogen gases—Mu+X2→MuX+X—are reported over the temperature ranges from 500 down to 100, 160, and 200 K for X2=F2,Cl2, and Br2, respectively. The Arrhenius plots for both the chlorine and fluorine reactions show positive activation energies Ea over the whole temperature ranges studied, but which decrease to near zero at low temperature, indicative of the dominant role played by quantum tunneling of the ultralight muonium atom. In the case of Mu+F2, the bimolecular rate constant k(T) is essentially independent of temperature below 150 K, likely the first observation of Wigner threshold tunneling in gas phase (H atom) kinetics. A similar trend is seen in the Mu+Cl2 reaction. The Br2 data exhibit an apparent negative activation energy [Ea=(−0.095±0.020) kcal mol−1], constant over the temperature range of ∌200–400 K, but which decreases at higher temperatures, indicative of a highly attractive potential energy surface. This result is consistent with the energy dependence in the reactive cross section found some years ago in the atomic beam data of Hepburn et al. [J. Chem. Phys. 69, 4311 (1978)]. In comparing the present Mu data with the corresponding H atom kinetic data, it is found that Mu invariably reacts considerably faster than H at all temperatures, but particularly so at low temperatures in the cases of F2 and Cl2. The current transition state calculations of Steckler, Garrett, and Truhlar [Hyperfine Interact. 32, 779 (986)] for Mu+X2 account reasonably well for the rate constants for F2 and Cl2 near room temperature, but their calculated value for Mu+Br2 is much too high. Moreover, these calculations seemingly fail to account for the trend in the Mu+F2 and Mu+Cl2 data toward pronounced quantum tunneling at low temperatures. It is noted that the Mu kinetics provide a crucial test of the accuracy of transition state treatments of tunneling on these early barrier HX2 potential energy surfaces.NSERC (Canada), Donors of the Petroleum Research Fund, administered by the American Chemical Society, for their partial support of this research and the Canada Council
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