30 research outputs found

    The elements of human cyclin D1 promoter and regulation involved

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    Cyclin D1 is a cell cycle machine, a sensor of extracellular signals and plays an important role in G1-S phase progression. The human cyclin D1 promoter contains multiple transcription factor binding sites such as AP-1, NF-қB, E2F, Oct-1, and so on. The extracellular signals functions through the signal transduction pathways converging at the binding sites to active or inhibit the promoter activity and regulate the cell cycle progression. Different signal transduction pathways regulate the promoter at different time to get the correct cell cycle switch. Disorder regulation or special extracellular stimuli can result in cell cycle out of control through the promoter activity regulation. Epigenetic modifications such as DNA methylation and histone acetylation may involved in cyclin D1 transcriptional regulation

    Effect of the COVID-19 pandemic on surgery for indeterminate thyroid nodules (THYCOVID): a retrospective, international, multicentre, cross-sectional study

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    Background Since its outbreak in early 2020, the COVID-19 pandemic has diverted resources from non-urgent and elective procedures, leading to diagnosis and treatment delays, with an increased number of neoplasms at advanced stages worldwide. The aims of this study were to quantify the reduction in surgical activity for indeterminate thyroid nodules during the COVID-19 pandemic; and to evaluate whether delays in surgery led to an increased occurrence of aggressive tumours.Methods In this retrospective, international, cross-sectional study, centres were invited to participate in June 22, 2022; each centre joining the study was asked to provide data from medical records on all surgical thyroidectomies consecutively performed from Jan 1, 2019, to Dec 31, 2021. Patients with indeterminate thyroid nodules were divided into three groups according to when they underwent surgery: from Jan 1, 2019, to Feb 29, 2020 (global prepandemic phase), from March 1, 2020, to May 31, 2021 (pandemic escalation phase), and from June 1 to Dec 31, 2021 (pandemic decrease phase). The main outcomes were, for each phase, the number of surgeries for indeterminate thyroid nodules, and in patients with a postoperative diagnosis of thyroid cancers, the occurrence of tumours larger than 10 mm, extrathyroidal extension, lymph node metastases, vascular invasion, distant metastases, and tumours at high risk of structural disease recurrence. Univariate analysis was used to compare the probability of aggressive thyroid features between the first and third study phases. The study was registered on ClinicalTrials.gov, NCT05178186.Findings Data from 157 centres (n=49 countries) on 87 467 patients who underwent surgery for benign and malignant thyroid disease were collected, of whom 22 974 patients (18 052 [78 center dot 6%] female patients and 4922 [21 center dot 4%] male patients) received surgery for indeterminate thyroid nodules. We observed a significant reduction in surgery for indeterminate thyroid nodules during the pandemic escalation phase (median monthly surgeries per centre, 1 center dot 4 [IQR 0 center dot 6-3 center dot 4]) compared with the prepandemic phase (2 center dot 0 [0 center dot 9-3 center dot 7]; p<0 center dot 0001) and pandemic decrease phase (2 center dot 3 [1 center dot 0-5 center dot 0]; p<0 center dot 0001). Compared with the prepandemic phase, in the pandemic decrease phase we observed an increased occurrence of thyroid tumours larger than 10 mm (2554 [69 center dot 0%] of 3704 vs 1515 [71 center dot 5%] of 2119; OR 1 center dot 1 [95% CI 1 center dot 0-1 center dot 3]; p=0 center dot 042), lymph node metastases (343 [9 center dot 3%] vs 264 [12 center dot 5%]; OR 1 center dot 4 [1 center dot 2-1 center dot 7]; p=0 center dot 0001), and tumours at high risk of structural disease recurrence (203 [5 center dot 7%] of 3584 vs 155 [7 center dot 7%] of 2006; OR 1 center dot 4 [1 center dot 1-1 center dot 7]; p=0 center dot 0039).Interpretation Our study suggests that the reduction in surgical activity for indeterminate thyroid nodules during the COVID-19 pandemic period could have led to an increased occurrence of aggressive thyroid tumours. However, other compelling hypotheses, including increased selection of patients with aggressive malignancies during this period, should be considered. We suggest that surgery for indeterminate thyroid nodules should no longer be postponed even in future instances of pandemic escalation.Funding None.Copyright (c) 2023 Published by Elsevier Ltd. All rights reserved

    Color image segmentation by partitional clustering algorithms

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    This paper presents the results of some partitional clustering algorithms applied to the segmentation of color images in the RGB space. As more information is involved in the algorithm, and the distance measure is more flexible, the better the results. The selected algorithms for this work are the K-means, the FCM, the GK-B, and the GKPFCM. The GKPFCM gives the better results when all the algorithms are applied to the segmentation of two images, an image of bananas and the other one of tomates at different stages of ripeness in both cases. The results are interesting as it is possible to identify the objects, to determine the degree of ripeness, and to estimate the amount and proportion of ripe objects for a possible decision-making. � 2010 IEEE

    Images sub-segmentation with the PFCM clustering algorithm

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    In this work we propose a method for subsegmentation of images using the PFCM clustering algorithm. The sub-segmentation consists of finding, within the clusters found using the segmentation process, those data less representative, or atypical data, belonging to the clusters. These data represent, in many cases, the zones of interest during image analysis. Two different examples are used in order to show the results, and the advantages of identifying those elements of data forced to belong to a cluster, of which they are the less representative and, therefore may contain information of great interest in particular applications. � 2009 IEEE

    Quality of microcalcification segmentation in mammograms by clustering algorithms

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    Breast cancer remains a leading cause of death among women worldwide. Mammography is one of the non-invasive methods to find breast tumors, which is very useful in the detection of cancer. Microcalcifications are one of the anomalies of this disease, and these appear as small white spots on the images. Several computer-aided systems (CAD) have been developed for the detection of anomalies related to the disease. However, one of the critical parts is the segmentation process, as the rate of detection of anomalies in the breast by mammography largely depends on this process. In addition, a low detection endangers women�s lives, while a high detection of suspicious elements have excessive cost. Hence, in this work we do a comparative study of segmentation algorithms, specifically three of them derived from the family of c-Means, and we use the NU (Non-Uniformity) measure as a quality indicator of segmentation results. For the study we use 10 images of the MIAS database, and the algorithms are applied to the regions of interest (ROI). Results are interesting, the novel method of subsegmentation allows continuous and gradual adjustment, which is better adapted to the regions of micro calcification, and this results in smaller NU values. The NU measure can be used as an indication of quality, which depends on the number of pixels and the homogeneity of the segmented regions, although it should be put in the context of the application to avoid making misinterpretations. � Springer International Publishing Switzerland 2014

    Identification of masses in mammograms by image sub-segmentation

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    Mass detection in mammography is a complex and challenge problem for digital image processing. Partitional clustering algorithms are a good alternative for automatic detection of such elements, but have the disadvantage of having to segment an image into a number of regions, the number of which is unknown in advance, in addition to discrete approximations of the regions of interest. In this work we use a method of image sub-segmentation to identify possible masses in mammography. The advantage of this method is that the number of regions to segment the image is a known value so the algorithm is applied only once. Additionally, there is a parameter ? that can change between 1 and 0 in a continuous way, offering the possibility of a continuous and more accurate approximation of the region of interest. Finally, since the identification of masses is based on the internal similarity of a group data, this method offers the possibility to identify such objects even from a small number of pixels in digital images. This paper presents an illustrative example using the traditional segmentation of images and the sub-segmentation method, which highlights the potential of the alternative we propose for such problems. � 2011 Springer-Verlag Berlin Heidelberg

    Identification of pore spaces in 3D CT soil images using PFCM partitional clustering

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    Recent advances in non-destructive imaging techniques, such as X-ray computed tomography (CT), make it possible to analyse pore space features from the direct visualisation from soil structures. A quantitative characterisation of the three-dimensional solid-pore architecture is important to understand soil mechanics, as they relate to the control of biological, chemical, and physical processes across scales. This analysis technique therefore offers an opportunity to better interpret soil strata, as new and relevant information can be obtained. In this work, we propose an approach to automatically identify the pore structure of a set of 200-2D images that represent slices of an original 3D CT image of a soil sample, which can be accomplished through non-linear enhancement of the pixel grey levels and an image segmentation based on a PFCM (Possibilistic Fuzzy C-Means) algorithm. Once the solids and pore spaces have been identified, the set of 200-2D images is then used to reconstruct an approximation of the soil sample by projecting only the pore spaces. This reconstruction shows the structure of the soil and its pores, which become more bounded, less bounded, or unbounded with changes in depth. If the soil sample image quality is sufficiently favourable in terms of contrast, noise and sharpness, the pore identification is less complicated, and the PFCM clustering algorithm can be used without additional processing; otherwise, images require pre-processing before using this algorithm. Promising results were obtained with four soil samples, the first of which was used to show the algorithm validity and the additional three were used to demonstrate the robustness of our proposal. The methodology we present here can better detect the solid soil and pore spaces on CT images, enabling the generation of better 2D-3D representations of pore structures from segmented 2D images. © 2013 Elsevier B.V
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