Breeding for specific bioregions: a genotype by environment study of horticultural and nutritional traits integrating breeder and farmer priorities for organic broccoli cultivar improvement

The genotype by environment interaction study of broccoli, amongst others demonstrates that traits of a cultivar are sometimes ranked differently when grown in an organic production system compared to a conventional system. This has strong implications for breeding strategies. The breeders interviewed acknowledged that more attention on abiotic and biotic stress resistance in a broccoli breeding programme is needed which is in accordance with the farmers' varietal requirements. The first findings of the field trials show that cultivar performance is influenced by season and region, and differences in treatment (organic versus conventional management). The field trials showed that there are cultivars with broad adaptation such as "Green Goliath". These cultivars performed across locations, seasons and treatments within the sub-top group, however, organic farmers would benefit more from cultivars specifically adapted to their region and season. The trial results showed a wide range of glucosinolate levels. Glucoraphanin was very genotype dependent, while glucobrassicin and neoglucobrassicin were more influenced by abiotic and biotic environmental factors. Therefore, there are opportunities for nutritional performance enhancement under organic conditions which would provide an added value to the product quality with respect to human and plant health. Further elaboration of the dataset will contribute to the design of regional breeding strategies for improved broccoli cultivars for the organic market

Broccoli cultivar performance under organic and conventional management systems and implications for crop improvement

To determine if present commercial broccoli cultivars meet the diverse needs of organic management systems, such as adaptation to low N input, mechanical weed management, and no chemical pesticide use, and to propose the selection environments for crop improvement for organic production, we compared horticultural trait performance of 23 broccoli cultivars (G) under two management (M) systems (organic and conventional) in two regions of the United States (Oregon and Maine), including spring and fall trials. In our trials, location and season had the largest effect on broccoli head weight, with Oregon outperforming Maine, and fall trials outperforming spring plantings. M main effects and G × M interactions were often small, but G × M × E (location and season) were large. Cultivars with both greater head weight and stability under conventional conditions generally had high head weight and stability under organic growing conditions, although there were exceptions in cultivar rank between management systems. Larger genotypic variances and somewhat increased error variances observed in organic compared with conventional management systems led to repeatability for head weight and other horticultural traits that were similar or even higher in organic compared with conventional conditions. The ratio of correlated response (predicting performance under organic conditions when evaluated in conventional conditions) to direct response (predicted performance in organic when evaluated under organic conditions) for all traits was close to but less than 1.0 with the exception of bead uniformity. This would imply that in most cases, direct selection in an organic environment could result in a more rapid genetic gain than indirect selection in a conventional environment

Variation in Broccoli Cultivar Phytochemical Content under Organic and Conventional Management Systems: Implications in Breeding for Nutrition

Organic agriculture requires cultivars that can adapt to organic crop management systems without the use of synthetic pesticides as well as genotypes with improved nutritional value. The aim of this study encompassing 16 experiments was to compare 23 broccoli cultivars for the content of phytochemicals associated with health promotion grown under organic and conventional management in spring and fall plantings in two broccoli growing regions in the US (Oregon and Maine). The phytochemicals quantified included: glucosinolates (glucoraphanin, glucobrassicin, neoglucobrassin), tocopherols (d-, c-, a-tocopherol) and carotenoids (lutein, zeaxanthin, b-carotene). For glucoraphanin (17.5%) and lutein (13%), genotype was the major source of total variation; for glucobrassicin, region (36%) and the interaction of location and season (27.5%); and for neoglucobrassicin, both genotype (36.8%) and its interactions (34.4%) with season were important. For d- and ctocopherols, season played the largest role in the total variation followed by location and genotype; for total carotenoids, genotype (8.41–13.03%) was the largest source of variation and its interactions with location and season. Overall, phytochemicals were not significantly influenced by management system. We observed that the cultivars with the highest concentrations of glucoraphanin had the lowest for glucobrassicin and neoglucobrassicin. The genotypes with high concentrations of glucobrassicin and neoglucobrassicin were the same cultivars and were early maturing F1 hybrids. Cultivars highest in tocopherols and carotenoids were open pollinated or early maturing F1 hybrids. We identified distinct locations and seasons where phytochemical performance was higher for each compound. Correlations among horticulture traits and phytochemicals demonstrated that glucoraphanin was negatively correlated with the carotenoids and the carotenoids were correlated with one another. Little or no association between phytochemical concentration and date of cultivar release was observed, suggesting that modern breeding has not negatively influenced the level of tested compounds. We found no significant differences among cultivars from different seed companies

Genetic variation in \u3ci\u3eMiscanthus\u3c/i\u3e X \u3ci\u3egiganteus\u3c/i\u3e and the importance of estimating genetic distance thresholds for differentiating clones

Miscanthus x giganteus (Mxg) is an important bioenergy feedstock crop, however, genetic diversity among legacy cultivars may be severely constrained. Only one introduction from Japan to Denmark of this sterile, triploid, vegetatively propagated crop was recorded in the 1930s. We sought to determine if the Mxg cultivars in North America were all synonyms, and if they were derived from the European introduction. We used 64 nuclear and five chloroplast simple sequence repeat (SSR) markers to estimate genetic similarity for 27 Mxg accessions from North America, and compared them with six accessions from Europe, including the species’ type-specimen. A subset of accessions was also evaluated by restriction-site associated DNA sequencing (RAD-seq). In addition, we assessed the potential of new crosses to increase Mxg genetic diversity by comparing eight new triploid Mxg progeny grown from seed, along with samples of the parental species M. sacchariflorus and M. sinensis. Estimates of genotyping error rates were essential for distinguishing between experimental error and true genotypic differences among accessions. Given differences in estimated error rates and costs per marker for SSRs and RAD-seq, the former is currently more cost-effective for determining if two accessions are genetically identical. We concluded that all of the Mxg legacy cultivars were derived via vegetative propagation from a single genet. In contrast with the Mxg legacy cultivars, genetic similarity to the type-specimen of eight new triploid Mxg progeny ranged from 0.46 to 0.56. Though genetic diversity among the Mxg legacy cultivars is critically low, new crosses can provide much-needed variation to growers

Papel dos tricomas glandulares da folha do tomateiro na oviposição de Tuta absoluta

Os tricomas glandulares presentes nas folhas e ramos das plantas do gênero Lycopersicon são responsáveis pela secreção de metabólitos de diferentes naturezas. A presença de alguns desses compostos tem sido associada à resistência do tomate a diferentes insetos. A traça-do-tomateiro, Tuta absoluta (Meyrick), é uma das pragas mais nocivas da América do Sul. O adulto oviposita sobre as folhas do tomate e suas larvas abrem galerias no mesófilo das folhas, ramos, flores e frutos. As espécies silvestres do tomate conservam a capacidade de biossintetizar compostos químicos que lhes conferem resistência a esta praga. No presente trabalho, foi avaliada a preferência para oviposição desse inseto sobre folhas com e sem tricomas glandulares de L. esculentum (Mill.) cv. Uco Plata, suscetível, e de L. hirsutum f. glabratum (Mull.) PI 134417, espécie silvestre afim ao tomate, e resistente à traça. Os resultados sugerem que as fêmeas ovipositam indistintamente sobre as folhas de ambas espécies, independentemente da presença, ou não, dos tricomas glandulares. E a presença destes e de seus exsudatos não têm efeito inibidor na oviposição do inseto

Genome biology of the paleotetraploid perennial biomass crop Miscanthus

Miscanthus is a perennial wild grass that is of global importance for paper production, roofing, horticultural plantings, and an emerging highly productive temperate biomass crop. We report a chromosome-scale assembly of the paleotetraploid M. sinensis genome, providing a resource for Miscanthus that links its chromosomes to the related diploid Sorghum and complex polyploid sugarcanes. The asymmetric distribution of transposons across the two homoeologous subgenomes proves Miscanthus paleo-allotetraploidy and identifies several balanced reciprocal homoeologous exchanges. Analysis of M. sinensis and M. sacchariflorus populations demonstrates extensive interspecific admixture and hybridization, and documents the origin of the highly productive triploid bioenergy crop M. x giganteus. Transcriptional profiling of leaves, stem, and rhizomes over growing seasons provides insight into rhizome development and nutrient recycling, processes critical for sustainable biomass accumulation in a perennial temperate grass. The Miscanthus genome expands the power of comparative genomics to understand traits of importance to Andropogoneae grasses

The species-area relationship: new challenges for an old pattern

The species-area relationship (i.e., the relationship between area and the number of species found in that area) is one of longest and most frequently studied patterns in nature. Yet there remain some important and interesting questions on the nature of this relationship, its causality, quantification and application for both ecologists and conservation biologists.Yeshttps://us.sagepub.com/en-us/nam/manuscript-submission-guideline