Virtual libraries of tissue and clinical samples: potential role of a 3-D microscope.

Our international innovative teaching group from different European Universities (De Montfort University, DMU, UK; and the Spanish University of Alcalá, University Miguel Hernández and University of San Pablo CEU), in conjunction with practicing biomedical scientists in the National Health Service (UK) and biomedical researchers, are developing two complete e-learning packages for teaching and learning medical parasitology, named DMU e-Parasitology (accessible at: http://parasitology.dmu.ac.uk), and biology and chemistry, named DMU e-Biology (accessible at: http://parasitology.dmu.ac.uk/ebiology/index.htm), respectively. Both packages will include a virtual microscope with a complete library of digitised tissue images, clinical slides and cell culture slides/mini-videos for enhancing the teaching and learning of a myriad of techniques applicable to health science undergraduate and postgraduate students. Thus, these packages include detecting human parasites, by becoming familiar with their infective structures and/or organs (e.g. eggs, cysts) and/or explore pathogenic tissues stained with traditional (e.g. haematoxylin & eosin) or more modern (e.g. immunohistochemistry) techniques. The Virtual Microscope (VM) module in the DMU e-Parasitology package is almost completed (accessible at: http://parasitology.dmu.ac.uk/learn/microscope.htm) and contains a section for the three major groups of human-pathogenic parasites (Peña-Fernández et al., 2018) [1]. Digitised slides are provided with the functionality of a microscope by using the gadget Zoomify®, and we consider that they can enhance learning, as previous studies reported in the literature have reported similar sensitivity and specificity rates for identification of parasites for both digitised and real slides. The DMU e-Biology’s VM, currently in development, will provide healthy and pathological tissue samples from a range of mammalian tissues and organs. This communication will provide a description of both virtual libraries and the process of developing them. In conjunction, we will use a three-dimensional (3D) super-resolution microscopy, 3D Cell Explorer (Nanolive, Lausanne, Switzerland), to incorporate potential 3D microscopic photographs/short videos of cells to provide students with information about the spatial arrangement and morphologies of cells that are essential for life

Web-based learning and teaching resources for microscopic detection of human parasites.

DMU e-Parasitology (http://parasitology.dmu.ac.uk) presents novel web-based resources co-developed by EU academics at De Montfort University (DMU) for the teaching and learning of microscopic diagnoses of common and emerging human parasites. The package will be completed early in 2019 and presents a Virtual Laboratory and Microscope, which are equipped with engaging units for learning parasitological staining and fresh preparation techniques for detecting cysts, oocysts, eggs and spores, in conjunction with a library of digitised clinical slides. Units are equipped with short videos of academics performing the different techniques and quizzes and exercises, to provide students with the most practical experience possible

Introducing medical parasitology at the University of Makeni, Sierra Leone

The file attached to this record is the author's final peer reviewed version.Capacity building in Sierra Leone (West Africa) is critical to prevent potential future outbreaks similar to the 2013-16 Ebola outbreak that had devastating effects for the country and its poorly developed healthcare system. De Montfort University (DMU) in the United Kingdom (UK), in collaboration with parasitologists from the Spanish Universities of San Pablo CEU and Miguel Hernández de Elche, is leading a project to build the teaching and research capabilities of medical parasitology at the University of Makeni (UniMak, Sierra Leone). This project has two objectives: a) to introduce and enhance the teaching of medical parasitology, both theoretical and practical; and b) to implement and develop parasitology research related to important emerging human parasites such as Cryptosporidium spp. due to their public health significance. Two UniMak academics, hired to help initiate and implement the research part of the project, shared their culturally sensitive public health expertise to broker parasitology research in communities and perform a comprehensive environmental monitoring study for the detection of different emerging human parasites. The presence of targeted parasites are being studied microscopically using different staining techniques, which in turn have allowed UniMak’s academics to learn these techniques to develop new practicals in parasitology. To train UniMak’s academics and develop both parts of our project, a DMU researcher visited UniMak for two weeks in April 2019 and provided a voluntary short training course in basic parasitology, which is currently not taught in any of their programmes, and was attended by 31 students. These sessions covered basic introduction to medical parasitology and life-cycle, pathogenesis, detection, treatment and prevention of: a) coccidian parasites (Cryptosporidium, Cyclospora and Cystoisospora); b) Giardia intestinalis, Entamoeba and free-living amoebas; c) malaria and d) microsporidia. A theoretical session on common staining techniques was also provided. To facilitate the teaching and learning of these parasites, the novel resource DMU e-Parasitology was used, a package developed by the above participating universities and biomedical scientists from the UK National Health Service (NHS): http://parasitology.dmu.ac.uk/ index.htm. Following the two weeks of training, UniMak’s academics performed different curriculum modifications to the undergraduate programme ‘Public Health: Medical Laboratory Sciences’, which includes the introduction of new practicals in parasitology and changes to enhance the content of medical parasitology that will be subjected to examination. Thus, a new voluntary practical on Kinyoun stain for the detection of coccidian parasites was introduced in the final year module of ‘Medical Bacteriology and Parasitology’; eighteen students in pairs processed faecal samples from pigs provided by the Department of Agriculture and Food Security from a nearby farm. Academics at UniMak used the Kinyoun staining unit (available at http://parasitology.dmu.ac.uk/learn/lab/Kinyoun/story_html5.html; [1]) to deliver this practical. Although our project is at a preliminary stage, it has been shown to be effective in promoting the introduction and establishment of medical parasitology at UniMak and could be viewed as a case-study for other universities in low-income countries to promote the United Nations (UN) Sustainable Development Goals (SDGs) and improve public health understanding of infectious diseases

Cryptosporidium spp. in the English urban environment: a public health concern?

Several species of Cryptosporidium can infect humans and have been described as opportunistic parasites. Different outbreaks have been described in the UK as oocysts of these pathogens can spread through contaminated water and food as some species of Cryptosporidium, such as C. parvum, exhibit resistance to harsh environmental conditions. These pathogens have been found in animal faeces, thus we reported the presence of Cryptosporidium spp. in a dog faecal sample collected in a highly frequented public park in Leicester city centre (UK), after screening 9 topsoil and 18 faecal samples. As a result, and to determine potential risks to the Leicester population, we collected 132 animal faecal samples [37 deer, 13 dogs, 4 cats and 78 avian (27 uncertain due to diarrhoea, 25 pigeon, 14 waterfowl and 12 songbird)] across different parks in Leicester from June 2017 to May 2018. Animal faecal samples were appropriately screened using Kinyoun's acid-fast staining. We observed structures related to Cryptosporidium spp. in 16 faecal samples as follows: 10.3% avian (3 pigeon, 2 songbird and 3 diarrhoeic), 18.9% deer and 7.7% dog. However, and in order to characterise the risks to the local population, molecular analysis will be required to determine if the oocysts of Cryptosporidium spp. found are from anthroponotic species. Our results might highlight the relevance of performing environmental monitoring studies to determine the presence of these pathogens in the urban environment due to the unprecedented expansion of the urban media that is occurring to a global scale

Preliminary Measurements of the Motion of Arcjet Current Channel Using Inductive Magnetic Probes

This paper covers the design and first measurements of non-perturbative, external inductive magnetic diagnostics for arcjet constrictors which can measure the motion of the arc current channel. These measurements of arc motion are motivated by previous simulations using the ARC Heater Simulator (ARCHeS), which predicted unsteady arc motion due to the magnetic kink instability. Measurements of the kink instability are relevant to characterizing motion of the enthalpy profile of the arcjet, the arcjet operational stability, and electrode damage due to associated arc detachment events. These first measurements indicate 4 mm oscillations at 0.5-2 kHz of the current profile

Flavored Non-Minimal Left-Right Symmetric Model Fermion Masses and Mixings

A complete study on the fermion masses and flavor mixing is presented in a non-minimal left-right symmetric model (NMLRMS) where the ${\bf S}_{3}\otimes {\bf Z}_{2}\otimes {\bf Z}^{e}_{2}$ flavor symmetry drives the Yukawa couplings. In the quark sector, the mass matrices possess a kind of the generalized Fritzsch textures that allow us to fit the CKM mixing matrix in good agreement to the last experimental data. In the lepton sector, on the other hand, a soft breaking of the $\mu\leftrightarrow \tau$ symmetry provides a non zero and non maximal reactor and atmospheric angles, respectively. The inverted and degenerate hierarchy are favored in the model where a set of free parameters is found to be consistent with the current neutrino data.Comment: 23 pages, 9 figures. references added, typos corrected, JCGI added his current institution;conclusions rewrote and unchanged results. Version published in European Physical Journal

Directly tracing the vertical stratification of molecules in protoplanetary disks

We aim to directly trace the vertical location of the emitting surface of multiple molecular tracers in protoplanetary disks. Our sample of disks includes Elias 2-27, WaOph 6 and the sources targeted by the MAPS ALMA Large Program. The set of molecules studied include CO isotopologues in various transitions, HCN, CN, H2CO, HCO+, C2H and c-C3H2. The vertical emitting region is determined directly from the channel maps, implementing accurate masking of the channel emission to recover the vertical location of the emission surface even at large radial distances from the star and for low-SNR lines. The vertical location of the emitting layer is obtained for 4-10 lines in each disk. IM Lup, HD163296 and MWC 480 12CO and 13CO show vertical modulations, which are coincident with dust gaps and kinematical perturbations. We also present estimates of the gas pressure scale height in the disks from the MAPS sample. Compared to physical-chemical models we find good agreement with the vertical location of CO isotopologues. In HD 163296 CN and HCN trace a similar intermediate layer, for the other disks, the UV flux tracers and the vertical profiles of HCN and C2H are lower than predicted in theoretical models. HCN and H2CO show a highly structured vertical profile, possibly indicative of different formation pathways. It is possible to trace the vertical locations of multiple molecular species that trace a wide variety of physical and chemical disk properties. The distribution of CO isotopologues are found at a wide range of vertical heights $z/r =$ 0.5-0.05. Other molecular lines are mostly found at $z/r \leq$0.15. The vertical layering of molecules is in agreement with theory in some systems, but not in all, therefore dedicated chemical-physical models are needed to further study and understand the emission surfaces.Comment: Accepted for publication in A&A. 29 pages, 28 figure

On two-dimensional superpotentials: from classical Hamilton-Jacobi theory to 2D supersymmetric quantum mechanics

Superpotentials in ${\cal N}=2$ supersymmetric classical mechanics are no more than the Hamilton characteristic function of the Hamilton-Jacobi theory for the associated purely bosonic dynamical system. Modulo a global sign, there are several superpotentials ruling Hamilton-Jacobi separable supersymmetric systems, with a number of degrees of freedom greater than one. Here, we explore how supersymmetry and separability are entangled in the quantum version of this kind of system. We also show that the planar anisotropic harmonic oscillator and the two-Newtonian centers of force problem admit two non-equivalent supersymmetric extensions with different ground states and Yukawa couplings.Comment: 14 pages, 2 figures, version to appear in J. Phys. A: Math. Ge

Human-related microsporidia in the English urban environment: what we know so far?

The potential zoonotic transmission route of Enterocytozoon bieneusi and Encephalitozoon spp. (E. intestinalis, E. hellem and E. cuniculi) is under discussion. “Urban animals” could represent a risk to the population that should be carefully studied. Following the detection of human-related microsporidia in 2 out of 18 dog faecal samples collected in the city centre of Leicester (UK) in January 2016, 228 animal faecal samples were randomly sampled from different parks and recreational areas across the city from June 2016 to February 2017. The presence of microsporidia species were sought by real time polymerase chain reaction (RT-PCR) with melting curve analysis after extracting DNA by dysrupting the spores using Fast-Prep for soil following previous methodologies. 28 stool samples were positive for human-pathogenic microsporidia, as follows: Enterocytozoon bieneusi was detected in 2 waterfowl stool samples. A higher prevalence of Encephalitozoon spp. was identified. Thus, 26 faecal samples (14 deer, 7 avian [3 waterfowl, 2 songbird, 1 pigeon, 1 uncertain], 2 dog, 1 fox and 2 unidentified due to diarhoea) were positive for Encephalitozoon spp. Specifically, E. intestinalis/ E. hellem were detected in two samples from avian species (waterfowl and diarrhoeic sample) and E. cuniculi in 7 (6 deer and 1 fox). Our results indicate that human-related microsporidia would be present in urban parks and recreational areas in Leicester, which could represent a risk for humans. Interventions to tackle this potential risk should be applicable to a variety of animals, although more studies are needed to fully understand the potential zoonotic role of these pathogens

Planar ESPAR Array Design with Nonsymmetrical Pattern by Means of Finite-Element Method, Domain Decomposition, and Spherical Wave Expansion

The application of a 3D domain decomposition finite-element and spherical mode expansion for the design of planar ESPAR (electronically steerable passive array radiator) made with probe-fed circular microstrip patches is presented in this work. A global generalized scattering matrix (GSM) in terms of spherical modes is obtained analytically from the GSM of the isolated patches by using rotation and translation properties of spherical waves. The whole behaviour of the array is characterized including all the mutual coupling effects between its elements. This procedure has been firstly validated by analyzing an array of monopoles on a ground plane, and then it has been applied to synthesize a prescribed radiation pattern optimizing the reactive loads connected to the feeding ports of the array of circular patches by means of a genetic algorithm