Isolated galaxies in hierarchical galaxy formation models - present-day properties and environmental histories

In this study, we have carried out a detailed, statistical analysis of isolated model galaxies, taking advantage of publicly available hierarchical galaxy formation models. To select isolated galaxies, we employ 2D methods widely used in the observational literature, as well as a more stringent 3D isolation criterion that uses the full 3D-real space information. In qualitative agreement with observational results, isolated model galaxies have larger fractions of late-type, star forming galaxies with respect to randomly selected samples of galaxies with the same mass distribution. We also find that the samples of isolated model galaxies typically contain a fraction of less than 15 per cent of satellite galaxies, that reside at the outskirts of their parent haloes where the galaxy number density is low. Projection effects cause a contamination of 2D samples of about 18 per cent, while we estimate a typical completeness of 65 per cent. Our model isolated samples also include a very small (few per cent) fraction of bulge dominated galaxies (B/T > 0.8) whose bulges have been built mainly by minor mergers. Our study demonstrates that about 65-70 per cent of 2D isolated galaxies that are classified as isolated at z = 0 have indeed been completely isolated since z = 1 and only 7 per cent have had more than 3 neighbours within a comoving radius of 1 Mpc. Irrespectively of the isolation criteria, roughly 45 per cent of isolated galaxies have experienced at least one merger event in the past (most of the mergers are minor, with mass ratios between 1:4 and 1:10). The latter point validates the approximation that isolated galaxies have been mainly influenced by internal processes.Comment: 15 pages, 13 figures, minor changes in the text, accepted for publication by MNRA

RB acute loss induces centrosome amplification and aneuploidy in murine primary fibroblasts

BACKGROUND: Incorrect segregation of whole chromosomes or parts of chromosome leads to aneuploidy commonly observed in cancer. The correct centrosome duplication, assuring assembly of a bipolar mitotic spindle, is essential for chromosome segregation fidelity and preventing aneuploidy. Alteration of p53 and pRb functions by expression of HPV16-E6 and E7 oncoproteins has been associated with centrosome amplification. However, these last findings could be the result of targeting cellular proteins in addition to pRb by HPV16-E7 oncoprotein. To get a more detailed picture on the role of pRb in chromosomal instability and centrosome amplification, we analyzed the effects of the acute loss of retinoblastoma gene function in primary conditional Rb deficient mouse embryonic fibroblasts (MEFs). Moreover, since pRb is a transcriptional repressor, microarray analysis was done on pRb-competent and pRb-deficient MEFs to evaluate changes in expression of genes for centrosome homeostasis and for correct mitosis. RESULTS: Acute loss of pRb induces centrosome amplification and aneuploidy in the vast majority of cells analyzed. A time course analysis shows a decrease of cells with amplified centrosomes after 40 days from the adenoviral infection. At this time only 12% of cells still show amplified centrosomes. Interestingly, cells with pRb constitutive loss show a similar percentage of cells with amplified centrosomes. DNA-Chip analyses in MEFs wt (mock infected) and pRb depleted (Ad-Cre infected) cells reveal differential expression of genes controlling both centrosome duplication and mitotic progression. CONCLUSION: Our findings suggest a direct link between pRb status, centrosome amplification and chromosomal instability, and define specific mitotic genes as targets whose gene expression has to be altered to achieve or maintain aneuploidy

VIPERS: Unveiling the Combined Evolution of Galaxies and Large Scale Structure at 0.5≤z ≤1.2

The VIMOS Public Extragalactic Redshift Survey (VIPERS) is the largest redshift survey ever conducted with the ESO telescopes. It has used the Very Large Telescope to collect nearly 100,000 redshifts from the general galaxy population at 0.5≤ z ≤1.2. With a combination of volume and sampling density that is unique for these redshifts, VIPERS allows statistical measurements of galaxy clustering and related cosmological quantities to be obtained on an equal footing with classic results from local redshift surveys. At the same time, the broad selection function and ancillary photometric data provide detailed information on the physical properties of the galaxy population and their relation to large-scale structure. This talk presents an overview of the results obtained so far, mostly based on the ∼ 55,000 galaxies forming the first public data release (PDR-1)

RNAi mediated acute depletion of Retinoblastoma protein (pRb) promotes aneuploidy in human primary cells via micronuclei formation

<p>Abstract</p> <p>Background</p> <p>Changes in chromosome number or structure as well as supernumerary centrosomes and multipolar mitoses are commonly observed in human tumors. Thus, centrosome amplification and mitotic checkpoint dysfunctions are believed possible causes of chromosomal instability. The Retinoblastoma tumor suppressor (<it>RB</it>) participates in the regulation of synchrony between DNA synthesis and centrosome duplication and it is involved in transcription regulation of some mitotic genes. Primary human fibroblasts were transfected transiently with short interfering RNA (siRNA) specific for human pRb to investigate the effects of pRb acute loss on chromosomal stability.</p> <p>Results</p> <p>Acutely pRb-depleted fibroblasts showed altered expression of genes necessary for cell cycle progression, centrosome homeostasis, kinetochore and mitotic checkpoint proteins. Despite altered expression of genes involved in the Spindle Assembly Checkpoint (SAC) the checkpoint seemed to function properly in pRb-depleted fibroblasts. In particular <it>AURORA-A </it>and <it>PLK1 </it>overexpression suggested that these two genes might have a role in the observed genomic instability. However, when they were post-transcriptionally silenced in pRb-depleted fibroblasts we did not observe reduction in the number of aneuploid cells. This finding suggests that overexpression of these two genes did not contribute to genomic instability triggered by <it>RB </it>acute loss although it affected cell proliferation. Acutely pRb-depleted human fibroblasts showed the presence of micronuclei containing whole chromosomes besides the presence of supernumerary centrosomes and aneuploidy.</p> <p>Conclusion</p> <p>Here we show for the first time that <it>RB </it>acute loss triggers centrosome amplification and aneuploidy in human primary fibroblasts. Altogether, our results suggest that pRb-depleted primary human fibroblasts possess an intact spindle checkpoint and that micronuclei, likely caused by mis-attached kinetochores that in turn trigger chromosome segregation errors, are responsible for aneuploidy in primary human fibroblasts where pRb is acutely depleted.</p

Measuring the growth rate of structure around cosmic voids

Using an algorithm based on searching for empty spheres we identified 245 voids in the VIMOS Public Extragalactic Redshift Survey (VIPERS). We show how by modelling the anisotropic void-galaxy cross correlation function we can probe the growth rate of structure

Prep1 Controls Insulin Glucoregulatory Function in Liver by Transcriptional Targeting of SHP1 Tyrosine Phosphatase

AbstractObjective. We have investigated the function of the Prep1 gene in insulin-dependent glucose homeostasis in liver. Research design and methods. Prep1 action on insulin glucoregulatory function has been analyzed in liver of Prep1-hypomorphic mice (Prep1(i/i)), which express 2 to 3% of Prep1 mRNA. Results. Based on euglycemic hyperinsulinemic clamp studies, pyruvate tolerance tests and measurement of glycogen content, livers from Prep1(i/i) mice feature increased sensitivity to insulin. Tyrosine phosphorylation of both insulin receptor (IR) and IRS1/2 was significantly enhanced in Prep1(i/i) livers accompanied by a specific down-regulation of the SYP and SHP1 tyrosine phosphatases. Prep1 overexpression in HepG2 liver cells upregulated SYP and SHP1 and inhibited insulin-induced IR and IRS1/2 phosphorylation and was accompanied by reduced glycogen content. Consistently, overexpression of the Prep1 partner Pbx1 but not of p160MBP, mimicked Prep1 effects on tyrosine phosphorylations, glycogen content and on SYP and SHP1 expression. In Prep1 overexpressing cells, antisense silencing of SHP1, but not that of SYP, rescued insulin-dependent IR phosphorylation and glycogen accumulation. Both Prep1 and Pbx1 bind SHP1 promoter at a site located between nt -2113 and -1778. This fragment features enhancer activity and induces luciferase function by 7, 6 and 30-fold, respectively, in response to Prep1, Pbx1 or both. Conclusions. SHP1, a known silencer of insulin signal, is a transcriptional target of Prep1. In liver, transcriptional activation of SHP1 gene by Prep1 attenuates insulin signal transduction and reduces glucose storage

The Relation Between Activity and Environment in Compact Groups of Galaxies

We present the results of the classification of spectral activity types for 193 galaxies from a new sample of 49 compact groups of galaxies in the southern hemisphere (SCGs). This sample was selected in automated fashion from a digitized galaxy catalogue, covering an area of ~5200 sq deg, around the South Galactic Pole. It is complete up to m ~14.5 in b_j for the brightest galaxy of the group. The spectral analysis of the SCG galaxies confirms the results previously obtained for a smaller sample of Hickson's compact groups (HCG). We confirm the luminosity-activity and morphology-activity relations, as well as the predominance of AGNs (41% of SCGs galaxies). We verified also that the number of early-type non-emission-line galaxies increases with the number of members in the group. The SCGs contain more star-forming galaxies (SFGs) and less non-emission-line galaxies than HCGs, which suggests that they probe a wider range of physical properties. The SFGs are composed in majority of HII Nucleus Galaxies, which have less intense star formation than starburst galaxies. The star formation activity in SCGs is, consequently, remarkably low. The SFGs show also evidence for nuclear activity. If these results are further confirmed, 70% of the galaxies in SCGs would then have an active nucleus, making these systems remarkably rich in AGNs. Curiously, however, this characteristic of CGs generally excludes Seyfert 1 galaxies.(Abridged)Comment: 53 pages, Latex, 9 encapsulated postscript figures, Accepted for publication in The Astronomical Journa