MultiscaleDTM : an open‐source R package for multiscale geomorphometric analysis

Digital terrain models (DTMs) are datasets containing altitude values above or below a reference level, such as a reference ellipsoid or a tidal datum over geographic space, often in the form of a regularly gridded raster. They can be used to calculate terrain attributes that describe the shape and characteristics of topographic surfaces. Calculating these terrain attributes often requires multiple software packages that can be expensive and specialized. We have created a free, open‐source R package, MultiscaleDTM , that allows for the calculation of members from each of the five major thematic groups of terrain attributes: slope, aspect, curvature, relative position, and roughness, from a regularly gridded DTM. Furthermore, these attributes can be calculated at multiple spatial scales of analysis, a key feature that is missing from many other packages. Here, we demonstrate the functionality of the package and provide a simulation exploring the relationship between slope and roughness. When roughness measures do not account for slope, these attributes exhibit a strong positive correlation. To minimize this correlation, we propose a new roughness measure called adjusted standard deviation. In most scenarios tested, this measure produced the lowest rank correlation with slope out of all the roughness measures tested. Lastly, the simulation shows that some existing roughness measures from the literature that are supposed to be independent of slope can actually exhibit a strong inverse relationship with the slope in some cases

CCDC 815062: Experimental Crystal Structure Determination

An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures

CCDC 824685: Experimental Crystal Structure Determination

An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures

CCDC 815063: Experimental Crystal Structure Determination

An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures

Integrating Towed Underwater Video and Multibeam Acoustics for Marine Benthic Habitat Mapping and Fish Population Estimation

The west Florida shelf (WFS; Gulf of Mexico, USA) is an important area for commercial and recreational fishing, yet much of it remains unmapped and unexplored, hindering effective monitoring of fish stocks. The goals of this study were to map the habitat at an intensively fished area on the WFS known as “The Elbow”, assess the differences in fish communities among different habitat types, and estimate the abundance of each fish taxa within the study area. High-resolution multibeam bathymetric and backscatter data were combined with high-definition (HD) video data collected from a near-bottom towed vehicle to characterize benthic habitat as well as identify and enumerate fishes. Two semi-automated statistical classifiers were implemented for obtaining substrate maps. The supervised classification (random forest) performed significantly better (p = 0.001; α = 0.05) than the unsupervised classification (k-means clustering). Additionally, we found it was important to include predictors at a range of spatial scales. Significant differences were found in the fish community composition among the different habitat types, with both substrate and vertical relief found to be important with rock substrate and higher relief areas generally associated with greater fish density. Our results are consistent with the idea that offshore hard-bottom habitats, particularly those of higher vertical relief, serve as “essential fish habitat”, as these rocky habitats account for just 4% of the study area but 65% of the estimated total fish abundance. However, sand contributes 35% to total fish abundance despite comparably low densities due to its large area, indicating the importance of including these habitats in estimates of abundance as well. This work demonstrates the utility of combining towed underwater video sampling and multibeam echosounder maps for habitat mapping and estimation of fish abundance

Fibrinolysis in Acute and Chronic Cardiovascular Disease

The formation of an obstructive thrombus within an artery remains a major cause of mortality and morbidity worldwide. Despite effective inhibition of platelet function by modern antiplatelet therapies, these agents fail to fully eliminate atherothrombotic risk. This may well be related to extensive vascular disease, beyond the protective abilities of the treatment agents used. However, recent evidence suggests that residual vascular risk in those treated with modern antiplatelet therapies is related, at least in part, to impaired fibrin clot lysis. In this review, we attempt to shed more light on the role of hypofibrinolysis in predisposition to arterial vascular events. We provide a brief overview of the coagulation system followed by addressing the role of impaired fibrin clot lysis in acute and chronic vascular conditions, including coronary artery, cerebrovascular, and peripheral vascular disease. We also discuss the role of combined anticoagulant and antiplatelet therapies to reduce the risk of arterial thrombotic events, addressing both efficacy and safety of such an approach. We conclude that impaired fibrin clot lysis appears to contribute to residual thrombosis risk in individuals with arterial disease on antiplatelet therapy, and targeting proteins in the fibrinolytic system represents a viable strategy to improve outcome in this population. Future work is required to refine the antithrombotic approach by modulating pathological abnormalities in the fibrinolytic system and tailoring therapy according to the need of each individual