Unconstrained video monitoring of breathing behavior and application to diagnosis of sleep apnea

This paper presents a new real-time automated infrared video monitoring technique for detection of breathing anomalies, and its application in the diagnosis of obstructive sleep apnea. We introduce a novel motion model to detect subtle, cyclical breathing signals from video, a new 3-D unsupervised self-adaptive breathing template to learn individuals' normal breathing patterns online, and a robust action classification method to recognize abnormal breathing activities and limb movements. This technique avoids imposing positional constraints on the patient, allowing patients to sleep on their back or side, with or without facing the camera, fully or partially occluded by the bed clothes. Moreover, shallow and abdominal breathing patterns do not adversely affect the performance of the method, and it is insensitive to environmental settings such as infrared lighting levels and camera view angles. The experimental results show that the technique achieves high accuracy (94% for the clinical data) in recognizing apnea episodes and body movements and is robust to various occlusion levels, body poses, body movements (i.e., minor head movement, limb movement, body rotation, and slight torso movement), and breathing behavior (e.g., shallow versus heavy breathing, mouth breathing, chest breathing, and abdominal breathing). © 2013 IEEE

Different forms of the bovine PrP gene have five or six copies of a short, G-C-rich element within the protein-coding exon

Current models of the virus-like agents of scrapie and bovine spongiform encephalopathy (BSE) have to take into account that structural changes in a host-encoded protein (PrP protein) exhibit an effect on the time course of these diseases and the survival time of any man or animal exposed to these pathogens. We report here the sequence of different forms of the bovine PrP gene which contain either five or six copies of a short, G-C-rich element which encodes the octapeptide Pro-His-Gly-Gly-Gly-Trp-Gly-Gln or its longer variants Pro-Gln/His-Gly-Gly-Gly-Gly-Trp-Gly-Gln. Out of 12 cattle, we found eight animals homozygous for genes with six copies of the Gly-rich peptide (6:6), while four were heterozygous (6:5). Two confirmed cases of BSE occurred in (6: 6) homozygous animals. Bovine spongiform encephalopathy (BSE) is a transmissible disease (Fraser et al., 1988; Dawson et al., 1990; Barlow & Middleton, 1990) which produces neuropathological lesions in cattle similar to those seen in ovine scrapie (Wells et al., 1987) and the rare human dementias Creutzfeldt-Jakob disease (CJD) and Gerstmann-Str/iussler syndrome (GSS) (Beck & Daniel, 1987). A cellular membrane protein (PrP) has a key role in the transmission and development of these diseases. This protein accumulates in the brain and other tissues during the protracted time course of these diseases and, in a disease-specific, protease-resistant isoform (SAF-PrP), has been purified by subcellular fractionation of scrapie

Lensing Properties of Cored Galaxy Models

A method is developed to evaluate the magnifications of the images of galaxies with lensing potentials stratified on similar concentric ellipses. A simple contour integral is provided which enables the sums of the magnifications of even parity or odd parity or the central image to be easily calculated. The sums for pairs of images vary considerably with source position, while the signed sums can be remarkably uniform inside the tangential caustic in the absence of naked cusps. For a family of models in which the potential is a power-law of the elliptic radius, the number of visible images is found as a function of flattening, external shear and core radius. The magnification of the central image depends on the core radius and the slope of the potential. For typical source and lens redshifts, the missing central image leads to strong constraints; the mass distribution in the lensing galaxy must be nearly cusped, and the cusp must be isothermal or stronger. This is in accord with the cuspy cores seen in high resolution photometry of nearby, massive, early-type galaxies, which typically have the surface density falling like distance^{-1.3} outside a break radius of a few hundred parsecs. Cuspy cores by themselves can provide an explanation of the missing central images. Dark matter at large radii may alter the slope of the projected density; provided the slope remains isothermal or steeper and the break radius remains small, then the central image remains unobservable. The sensitivity of the radio maps must be increased fifty-fold to find the central images in abundance.Comment: 42 pages, 11 figures, ApJ in pres

Axisymmetric Self-Similar Equilibria of Self-Gravitating Isothermal Systems

All axisymmetric self-similar equilibria of self-gravitating, rotating, isothermal systems are identified by solving the nonlinear Poisson equation analytically. There are two families of equilibria: (1) Cylindrically symmetric solutions in which the density varies with cylindrical radius as R^(-alpha), with 0 <= alpha <= 2. (2) Axially symmetric solutions in which the density varies as f(theta)/r^2, where `r' is the spherical radius and `theta' is the co-latitude. The singular isothermal sphere is a special case of the latter class with f(theta)=constant. The axially symmetric equilibrium configurations form a two-parameter family of solutions and include equilibria which are surprisingly asymmetric with respect to the equatorial plane. The asymmetric equilibria are, however, not force-free at the singular points r=0, infinity, and their relevance to real systems is unclear. For each hydrodynamic equilibrium, we determine the phase-space distribution of the collisionless analog.Comment: 13 pages, 7 figures, uses emulateapj.sty. Submitted to Ap

Scatteract: Automated extraction of data from scatter plots

Charts are an excellent way to convey patterns and trends in data, but they do not facilitate further modeling of the data or close inspection of individual data points. We present a fully automated system for extracting the numerical values of data points from images of scatter plots. We use deep learning techniques to identify the key components of the chart, and optical character recognition together with robust regression to map from pixels to the coordinate system of the chart. We focus on scatter plots with linear scales, which already have several interesting challenges. Previous work has done fully automatic extraction for other types of charts, but to our knowledge this is the first approach that is fully automatic for scatter plots. Our method performs well, achieving successful data extraction on 89% of the plots in our test set.Comment: Submitted to ECML PKDD 2017 proceedings, 16 page

Mode-locked Bloch oscillations in a ring cavity

We present a new technique for stabilizing and monitoring Bloch oscillations of ultracold atoms in an optical lattice under the action of a constant external force. In the proposed scheme, the atoms also interact with a unidirectionally pumped optical ring cavity whose one arm is collinear with the optical lattice. For weak collective coupling, Bloch oscillations dominate over the collective atomic recoil lasing instability and develop a synchronized regime in which the atoms periodically exchange momentum with the cavity field.Comment: 7 pages, 5 figure

Negative regulation of the androgen receptor gene through a primate specific androgen response element present in the 5' UTR

Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. Acknowledgements This work was supported by funding from the Chief Scientist Office, Government of Scotland (Grant Nos CZB/4/477 and ETM/258). DNL was supported by the Association for International Cancer Research (Grant No. 03–127)Peer reviewedPublisher PD

Phase Separation in Charge-Stabilized Colloidal Suspensions: Influence of Nonlinear Screening

The phase behavior of charge-stabilized colloidal suspensions is modeled by a combination of response theory for electrostatic interparticle interactions and variational theory for free energies. Integrating out degrees of freedom of the microions (counterions, salt ions), the macroion-microion mixture is mapped onto a one-component system governed by effective macroion interactions. Linear response of microions to the electrostatic potential of the macroions results in a screened-Coulomb (Yukawa) effective pair potential and a one-body volume energy, while nonlinear response modifies the effective interactions [A. R. Denton, \PR E {\bf 70}, 031404 (2004)]. The volume energy and effective pair potential are taken as input to a variational free energy, based on thermodynamic perturbation theory. For both linear and first-order nonlinear effective interactions, a coexistence analysis applied to aqueous suspensions of highly charged macroions and monovalent microions yields bulk separation of macroion-rich and macroion-poor phases below a critical salt concentration, in qualitative agreement with predictions of related linearized theories [R. van Roij, M. Dijkstra, and J.-P. Hansen, \PR E {\bf 59}, 2010 (1999); P. B. Warren, \JCP {\bf 112}, 4683 (2000)]. It is concluded that nonlinear screening can modify phase behavior but does not necessarily suppress bulk phase separation of deionized suspensions.Comment: 14 pages of text + 9 figure