13,699 research outputs found

    Theory of doped Mott insulators: duality between pairing and magnetism

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    By bosonizing the electronic t-J model exactly on any two-dimensional (2D) lattices, and integrating out the gauge fluctuations combined to slave particles beyond mean fields, we get a theory in terms of physical Cooper pair and spin condensates. In the sense of mutual Berry phase they turns out to be dual to each other. The mutual-duality is the missing key in the resonant-valance-bond idea\cite{rvb} to work as a paradigm of doped 2D Mott insulators. We argue that essential aspects of high-TcT_c phenomenology find natural solutions in the theory. We also provide interesting predictions for systems on hexagonal lattices.Comment: 4 pages, no figures, Submitted to Phys. Rev. Let

    Screen key genes associated with distraction-induced osteogenesis of stem cells using bioinformatics methods

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    Background: Applying mesenchymal stem cells (MSCs), together with the distraction osteogenesis (DO) process, displayed enhanced bone quality and shorter treatment periods. The DO guides the differentiation of MSCs by providing mechanical clues. However, the underlying key genes and pathways are largely unknown. The aim of this study was to screen and identify hub genes involved in distraction-induced osteogenesis of MSCs and potential molecular mechanisms. Material and Methods: The datasets were downloaded from the ArrayExpress database. Three samples of negative control and two samples subjected to 5% cyclic sinusoidal distraction at 0.25 Hz for 6 h were selected for screening differentially expressed genes (DEGs) and then analysed via bioinformatics methods. The Gene Ontology (GO) terms and Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway enrichment were investigated. The protein–protein interaction (PPI) network was visualised through the Cytoscape software. Gene set enrichment analysis (GSEA) was conducted to verify the enrichment of a self-defined osteogenic gene sets collection and identify osteogenic hub genes. Results: Three hub genes (IL6, MMP2, and EP300) that were highly associated with distraction-induced osteogenesis of MSCs were identified via the Venn diagram. These hub genes could provide a new understanding of distraction-induced osteogenic differentiation of MSCs and serve as potential gene targets for optimising DO via targeted therapies

    Long-term dynamic compression enhancement TGF-β3-induced chondrogenesis in bovine stem cells: a gene expression analysis

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    Abstract: Background: Bioengineering has demonstrated the potential of utilising mesenchymal stem cells (MSCs), growth factors, and mechanical stimuli to treat cartilage defects. However, the underlying genes and pathways are largely unclear. This is the first study on screening and identifying the hub genes involved in mechanically enhanced chondrogenesis and their potential molecular mechanisms. Methods: The datasets were downloaded from the Gene Expression Omnibus (GEO) database and contain six transforming growth factor-beta-3 (TGF-β3) induced bovine bone marrow-derived MSCs specimens and six TGF-β3/dynamic-compression-induced specimens at day 42. Screening differentially expressed genes (DEGs) was performed and then analysed via bioinformatics methods. The Database for Annotation, Visualisation, and Integrated Discovery (DAVID) online analysis was utilised to obtain the Gene Ontology (GO) and Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway enrichment. The protein-protein interaction (PPI) network of the DEGs was constructed based on data from the STRING database and visualised through the Cytoscape software. The functional modules were extracted from the PPI network for further analysis. Results: The top 10 hub genes ranked by their connection degrees were IL6, UBE2C, TOP2A, MCM4, PLK2, SMC2, BMP2, LMO7, TRIM36, and MAPK8. Multiple signalling pathways (including the PI3K-Akt signalling pathway, the toll-like receptor signalling pathway, the TNF signalling pathway, and the MAPK pathway) may impact the sensation, transduction, and reaction of external mechanical stimuli. Conclusions: This study provides a theoretical finding showing that gene UBE2C, IL6, and MAPK8, and multiple signalling pathways may play pivotal roles in dynamic compression-enhanced chondrogenesis

    N-Jettiness Subtractions for ggHgg\to H at Subleading Power

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    NN-jettiness subtractions provide a general approach for performing fully-differential next-to-next-to-leading order (NNLO) calculations. Since they are based on the physical resolution variable NN-jettiness, TN\mathcal{T}_N, subleading power corrections in τ=TN/Q\tau=\mathcal{T}_N/Q, with QQ a hard interaction scale, can also be systematically computed. We study the structure of power corrections for 00-jettiness, T0\mathcal{T}_0, for the ggHgg\to H process. Using the soft-collinear effective theory we analytically compute the leading power corrections αsτlnτ\alpha_s \tau \ln\tau and αs2τln3τ\alpha_s^2 \tau \ln^3\tau (finding partial agreement with a previous result in the literature), and perform a detailed numerical study of the power corrections in the gggg, gqgq, and qqˉq\bar q channels. This includes a numerical extraction of the αsτ\alpha_s\tau and αs2τln2τ\alpha_s^2 \tau \ln^2\tau corrections, and a study of the dependence on the T0\mathcal{T}_0 definition. Including such power suppressed logarithms significantly reduces the size of missing power corrections, and hence improves the numerical efficiency of the subtraction method. Having a more detailed understanding of the power corrections for both qqˉq\bar q and gggg initiated processes also provides insight into their universality, and hence their behavior in more complicated processes where they have not yet been analytically calculated.Comment: 16 pages, 12 figure

    Measuring Significance of Community Structure in Complex Networks

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    Many complex systems can be represented as networks and separating a network into communities could simplify the functional analysis considerably. Recently, many approaches have been proposed for finding communities, but none of them can evaluate the communities found are significant or trivial definitely. In this paper, we propose an index to evaluate the significance of communities in networks. The index is based on comparing the similarity between the original community structure in network and the community structure of the network after perturbed, and is defined by integrating all the similarities. Many artificial networks and real-world networks are tested. The results show that the index is independent from the size of network and the number of communities. Moreover, we find the clear communities always exist in social networks, but don't find significative communities in proteins interaction networks and metabolic networks.Comment: 6 pages, 4 figures, 1 tabl
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