Irregular conformal block, spectral curve and flow equations

Irregular conformal block is motivated by the Argyres-Douglas type of N=2 super conformal gauge theory. We investigate the classical/NS limit of the irregular conformal block using spectral curve on a Riemann surface with irregular punctures, which is equivalent to the loop equation of irregular matrix model. The spectral curve is reduced to the second order (Virasoro symmetry, $SU(2)$ for the gauge theory) and third order ($W_3$ symmetry, $SU(3)$) differential equations of a polynomial with finite degree. The Virasoro and W symmetry generate flow equations in the spectral curve and determine the irregular conformal block, hence the partition function of the Argyres-Douglas theory ala AGT conjecture.Comment: 35 pages; v2: 38 pages, section 4 and references added, minor change

Virasoro irregular conformal block and beta deformed random matrix model

Virasoro irregular conformal block is presented as the expectation value of Jack-polynomials of the beta-deformed Penner-type matrix model and is compared with the inner product of Gaiotto states with arbitrary rank. It is confirmed that there are non-trivial modifications of the Gaiotto states due to the normalization of the states. The relation between the two is explicitly checked for rank 2 irregular conformal block.Comment: 13 pages, 1 figur

Comparison of Adsorptive Removal of Total Nitrogen (T-N) and Total Phosphorous (T-P) in Aqueous Solution using Granular Activated Charcoal (GAC)

The present study is to explore the possibility of utilizing granular activated charcoal (GAC) for the removal of total phosphorous (T-P) and total nitrogen (T-N) in aqueous solution. Batch adsorption studies were carried out to determine the influences of various factors like initial concentration, contact time and temperature. The adsorption data showed that GAC has a similar adsorption capacity for both T-N and T-P. The adsorption degree of T-N and T-P on GAC was highly concentration dependent. It was found that the adsorption capacity of GAC is quite favorable at a low concentration. At concentrations of 1.0 mg L-1 of T-P and 2.0 mg L-1 of T-N, approximately 97 % of adsorption was achieved by GAC. The equilibrium data were fitted well to the Langmuir isotherm model. The pseudo-second-order kinetic model appeared to be the better-fitting model because it has higher R2 compared with the pseudo-first-order and intra-particle kinetic model. The theoretical adsorption equilibrium qe,cal from pseudo-second-order kinetic model were relatively similar to the experimental adsorption equilibrium qe,exp. To evaluate the effect of thermodynamic parameters at different temperatures, the change in free energy ΔG, the enthalpy ΔH and the entropy ΔS were estimated. Except for adsorption of T-P at 278 K, the ΔG values obtained were all negative at the investigated temperatures. It indicates that the present adsorption system occurs spontaneously. The adsorption process of T-N by GAC was exothermic in nature, whereas T-P showed endothermic behavior. In addition, the positive values of ΔS imply that there was the increase in the randomness of adsorption of T-N and T-P at GAC-solution interface. Â

Inter- and Intra-Annual Variability of Vegetation in the Northern Hemisphere and Its Association with Precursory Meteorological Factors

Determination of phenological variation is one of the most critical challenges in dynamic vegetation modeling, given the lack of a strong theoretical framework. Previous studies generally focused on the timing of a phenological event (e.g., bud-burst or onset of growing season) and its atmospheric prompts, but not on the interactive variations across phenological stages. This study, therefore, investigated the inter- and intra-annual variability existing in all the phenological stages and the relations of the variability with four meteorological variables (surface temperature (Ts), shortwave radiation (SW ), vapor pressure deficit (VPD), and precipitation (PRCP)) using a 25-year (1982-2006) dataset of leaf area index (LAI) from the Advanced Very High Resolution Radiometer (AVHRR). Our six study sites of each 4 degree x 4 degree grids (mixed forest in China, deciduous needle-leaf forest in Siberia, evergreen needle-leaf forest in western Canada, grass in Gobi, and crops in the Central United States and southeastern Europe) include various vegetation types, local climates, and land-use types in the mid-latitudes of the northern hemisphere. Empirical orthogonal function (EOF) analysis with detrended LAI anomalies identified the two leading EOF modes that account for the amplitude and phase of the monthly LAI variations. The inter-annual correlation between the principle components (PCs) of the two modes and the meteorological variables for spring and summer showed that the amplitude and phase modes (AM and PM, respectively) were affected by different dominant meteorological factors. Over most of the study regions, AM was positively correlated with PRCP and negatively with Ts, SW, and VPD,while PMwas predominantly positively correlated with Ts. The contrasting responses of the two EOFmodes to Ts reflect environmental limitations on plant growth such as early start of growth, but with a reduced value of maximum LAI in a year with a warm spring. In addition, insignificant correlations between AMand PRCP, as well as negative correlations between PM and PRCP, in the crop regions suggest that human interventions such as advanced irrigation systems also play a key role in vegetative activity

F^2-Softmax: Diversifying Neural Text Generation via Frequency Factorized Softmax

Despite recent advances in neural text generation, encoding the rich diversity in human language remains elusive. We argue that the sub-optimal text generation is mainly attributable to the imbalanced token distribution, which particularly misdirects the learning model when trained with the maximum-likelihood objective. As a simple yet effective remedy, we propose two novel methods, F^2-Softmax and MefMax, for a balanced training even with the skewed frequency distribution. MefMax assigns tokens uniquely to frequency classes, trying to group tokens with similar frequencies and equalize frequency mass between the classes. F^2-Softmax then decomposes a probability distribution of the target token into a product of two conditional probabilities of (i) frequency class, and (ii) token from the target frequency class. Models learn more uniform probability distributions because they are confined to subsets of vocabularies. Significant performance gains on seven relevant metrics suggest the supremacy of our approach in improving not only the diversity but also the quality of generated texts.Comment: EMNLP 202

Spontaneous phase oscillation induced by inertia and time delay

We consider a system of coupled oscillators with finite inertia and time-delayed interaction, and investigate the interplay between inertia and delay both analytically and numerically. The phase velocity of the system is examined; revealed in numerical simulations is emergence of spontaneous phase oscillation without external driving, which turns out to be in good agreement with analytical results derived in the strong-coupling limit. Such self-oscillation is found to suppress synchronization and its frequency is observed to decrease with inertia and delay. We obtain the phase diagram, which displays oscillatory and stationary phases in the appropriate regions of the parameters.Comment: 5 pages, 6 figures, to pe published in PR

Inhibitory effect of a tyrosine-fructose Maillard reaction product, 2,4-bis(p-hydroxyphenyl)-2-butenal on amyloid-β generation and inflammatory reactions via inhibition of NF-κB and STAT3 activation in cultured astrocytes and microglial BV-2 cells

<p>Abstract</p> <p>Background</p> <p>Amyloidogenesis is linked to neuroinflammation. The tyrosine-fructose Maillard reaction product, 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal, possesses anti-inflammatory properties in cultured macrophages, and in an arthritis animal model. Because astrocytes and microglia are responsible for amyloidogenesis and inflammatory reactions in the brain, we investigated the anti-inflammatory and anti-amyloidogenic effects of 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal in lipopolysaccharide (LPS)-stimulated astrocytes and microglial BV-2 cells.</p> <p>Methods</p> <p>Cultured astrocytes and microglial BV-2 cells were treated with LPS (1 μg/ml) for 24 h, in the presence (1, 2, 5 μM) or absence of 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal, and harvested. We performed molecular biological analyses to determine the levels of inflammatory and amyloid-related proteins and molecules, cytokines, Aβ, and secretases activity. Nuclear factor-kappa B (NF-κB) DNA binding activity was determined using gel mobility shift assays.</p> <p>Results</p> <p>We found that 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal (1, 2, 5 μM) suppresses the expression of inducible nitric oxide synthase (iNOS) and cyclooxygenase-2 (COX-2) as well as the production of nitric oxide (NO), reactive oxygen species (ROS), tumor necrosis factor-α (TNF-α), and interleukin-1β (IL-1β) in LPS (1 μg/ml)-stimulated astrocytes and microglial BV-2 cells. Further, 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal inhibited the transcriptional and DNA binding activity of NF-κB--a transcription factor that regulates genes involved in neuroinflammation and amyloidogenesis via inhibition of IκB degradation as well as nuclear translocation of p50 and p65. Consistent with the inhibitory effect on inflammatory reactions, 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal inhibited LPS-elevated Aβ₄₂levels through attenuation of β- and γ-secretase activities. Moreover, studies using signal transducer and activator of transcription 3 (STAT3) siRNA and a pharmacological inhibitor showed that 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal inhibits LPS-induced activation of STAT3.</p> <p>Conclusions</p> <p>These results indicate that 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal inhibits neuroinflammatory reactions and amyloidogenesis through inhibition of NF-κB and STAT3 activation, and suggest that 2,4-bis(<it>p</it>-hydroxyphenyl)-2-butenal may be useful for the treatment of neuroinflammatory diseases like Alzheimer's disease.</p

ESTpass: a web-based server for processing and annotating expressed sequence tag (EST) sequences

We present a web-based server, called ESTpass, for processing and annotating sequence data from expressed sequence tag (EST) projects. ESTpass accepts a FASTA-formatted EST file and its quality file as inputs, and it then executes a back-end EST analysis pipeline consisting of three consecutive steps. The first is cleansing the input EST sequences. The second is clustering and assembling the cleansed EST sequences using d2_cluster and CAP3 programs and producing putative transcripts. From the CAP3 output, ESTpass detects chimeric EST sequences which are confirmed through comparison with the nr database. The last step is annotating the putative transcript sequences using RefSeq, InterPro, GO and KEGG gene databases according to user-specified options. The major advantages of ESTpass are the integration of cleansing and annotating processes, rigorous chimeric EST detection, exhaustive annotation, and email reporting to inform the user about the progress and to send the analysis results. The ESTpass results include three reports (summary, cleansing and annotation) and download function, as well as graphic statistics. They can be retrieved and downloaded using a standard web browser. The server is available at http://estpass.kobic.re.kr/

Microfluidic system for monitoring temporal variations of hemorheological properties and platelet adhesion in LPS-injected rats

Sepsis causes multiple organs failures and eventually death. Changes in blood constituents due to sepsis lead to alterations in hemorheological properties, and cell adhesiveness. In this study, a new microfluidic system is proposed to measure temporal variations in biophysical properties of blood after injecting lipopolysaccharide (LPS) into a rat extracorporeal model under ex vivo condition. To measure blood viscosity, the interfacial line between blood and a reference fluid is formed in a Y-shaped channel. Based on the relation between interfacial width and pressure ratio, the temporal variation in blood viscosity is estimated. Optical images of blood flows are analyzed by decreasing flow rate for examination of red blood cell (RBC) aggregation. Platelets initiated by shear acceleration around the stenosis adhere to the post-stenosed region. By applying a correlation map that visualizes the decorrelation of the streaming blood flow, the area of adhered platelets can be quantitatively attained without labeling of platelets. To assess sepsis inflammation, conventional biomarkers (PCT and IL-8) are also monitored. The increasing tendency for blood viscosity, RBC aggregation, platelet adhesion, and septic biomarkers are observed after LPS injection. This microfluidic system would be beneficial for monitoring the changes in hemorheological properties and platelet activation caused by sepsis.116Ysciescopu

Electrochemically Controlled Reconstitution of Immobilized Ferritins for Bioelectronic Applications

Site-specific reconstituted nanoparticles were fabricated via electrochemically-controlled biomineralization through the immobilization of biomolecules. The work reported herein includes the immobilization of ferritin with various surface modifications, the electrochemical biomineralization of ferritins with different inorganic cores, and the electrocatalytic reduction of oxygen on the reconstituted Pt-cored ferritins. Protein immobilization on the substrate is achieved by anchoring ferritins with dithiobis-N-succinimidyl propionate (DTSP). A reconstitution process of site-specific electrochemical biomineralization with a protein cage loads ferritins with different core materials. The ferritin acts as a nano-scale template, a biocompatible cage, and a separator between the nanoparticles. This first demonstration of electrochemically controlled site-specific reconstitution of biomolecules provides a new tool for biomineralization and opens the way to produce the bio-templated nanoparticles by electrochemical control. The nanosized platinum-cored ferritins on gold displayed good catalytic activity for the electrochemical reduction of oxygen, which is applicable to biofuel cell applications. This results in a smaller catalyst loading on the electrodes for fuel cells or other bioelectronic devices