Natural enemies and biodiversity : the double-edged sword of trophic interactions

Natural enemies, that is, species that inflict harm on others while feeding on them, are fundamental drivers of biodiversity dynamics and represent a substantial portion of biodiversity as well. Along the life history of the Earth, natural enemies have been involved in probably some of the most productive mechanisms of biodiversity genesis; that is, adaptive radiation mediated by enemy-victim coevolutionary processes. At ecological timescales, natural enemies are a fundamental piece of food webs and can contribute to biodiversity preservation by promoting stability and coexistence at lower trophic levels through top-down regulation mechanisms. However, natural enemies often produce dramatic losses of biodiversity, especially when humans are involved

1998 Sewall Wright Award: William Donald Hamilton

Journal ArticleThe Sewall Wright Award was established in 1991 to honor active investigators who have contributed in especially significant ways to the conceptual unification of the biological sciences. This year's recipient is William D. Hamilton of Oxford University. Beginning in the 1960s with his papers on the theory of inclusive fitness and the evolution of eusociality, Bill Hamilton's publications have permanently changed the landscape of ideas and interpretation surrounding a wide range of biological phenomena. His papers have clarified murky problems, generated new research agendas, and unified our understanding of many central concepts, on a truly revolutionary scale

Rapid, Precise, and High-Sensitivity Acquisition of Paleomagnetic and Rock-Magnetic Data: Development of a Low-Noise Automatic Sample Changing System for Superconducting Rock Magnetometers

Among Earth sciences, paleomagnetism is particularly linked to the statistics of large sample sets as a matter of historical development and logistical necessity. Because the geomagnetic field varies over timescales relevant to sedimentary deposition and igneous intrusion, while the fidelity of recorded magnetization is modulated by original properties of rock units and by alteration histories, "ideal" paleomagnetic results measure remanent magnetizations of hundreds of samples at dozens of progressive demagnetization levels, accompanied by tests of magnetic composition on representative sister specimens. We present an inexpensive, open source system for automating paleomagnetic and rock magnetic measurements. Using vacuum pick-and-place technology and a quartz-glass sample holder, the system can in one hour measure remanent magnetizations, as weak as a few pAm2, of ~30 specimens in two vertical orientations with measurement errors comparable to those of the best manual systems. The system reduces the number of manual manipulations required per specimen ~8 fold

The role of pathogen shedding in linking within- and between-host pathogen dynamics

A model linking within- and between-host pathogen dynamics via pathogen shedding (emission of pathogens throughout the course of infection) is developed, and several aspects of host availability and co-infection are considered. In this model, the rate of pathogen shedding affects both the pathogen population size within a host (also affecting host mortality) and the rate of infection of new hosts. Our goal is to ascertain how the rate of shedding is likely to evolve, and what factors permit coexistence of alternative shedding rates in a pathogen population. For a constant host population size (where an increase in infected hosts necessarily decreases susceptible hosts), important differences arise depending on whether pathogens compete only for susceptible (uninfected) hosts, or whether co-infection allows for competition for infected hosts. With no co-infection, the pathogen type that can persist with the lowest number of susceptible hosts will outcompete any other, which under the assumptions of the model is the pathogen with the highest basic reproduction number. This is often a pathogen with a relatively high shedding rate (s). If within-host competition is allowed, a trade-off develops due to the conflicting effects of shedding on within- and between-host pathogen dynamics, with within-host competition favoring clones with low shedding rates while between-host competition benefits clones with higher shedding rates. With within-host competition for the same host cells, low shedding rate clones should eliminate high-s clones in a co-infected host, if equilibrium is reached. With co-infection, but no within-host competition, pathogen clones still interact by affecting the mortality of co-infected hosts; here, coexistence is more likely. With co-infection, two clones can coexist if one is the superior competitor for uninfected hosts and the other for co-infected hosts

Rip current spacing in relation to wave energetics and directional spreading

Rip current spacings are compared with wave energetics and directional spreading in the Southern Monterey Bay. Southern Monterey Bay affords a unique environment to study rip currents owing to their prevalence created by near-normally incident waves on a sandy shoreline. It is hypothesized that rip current spacing is a function of wave directional spreading and energy flux, based on the morphodynamic modeling by Reniers et al. 2003. A gradient of wave energy flux exists due to headlands and refraction over Monterey Canyon. Rip currents are shown to occur between cusps in the shoreline, allowing cusp spacing to be a surrogate for rip spacing. Rip current spacing was inferred from beach morphology surveys, LIDAR imagery, and Argus cameras, and found to be O(150m) at Sand City and O(300m) at Marina, separated by 6km . Measured waves during a two month period using wave-rider buoys, show a gradient of across-shore energy flux between Sand City, 2 28000( / ) F Jm x . , and Marina, 2 33000( / ) F Jm x . . The two sites have the same peak directional spreading of energy value, 14 peak ̤= o , and slightly different bulk values for Sand City, 18 bulk ̤= o , and Marina, 20 bulk ̤= o . Therefore, the variations in rip current spacing could not be attributed to directional spreading but appear related to variations in energy flux.http://archive.org/details/ripcurrentspacin10945972Ensign, United States Naval ReserveApproved for public release; distribution is unlimited

Patch size effects on plant species decline in an experimentally fragmented landscape

This is the publisher's version, also available electronically from http://www.esa.org/esa.Understanding local and global extinction is a fundamental objective of both basic and applied ecology. Island biogeography theory (IBT) and succession theory provide frameworks for understanding extinction in changing landscapes. We explore the relative contribution of fragment size vs. succession on species' declines by examining distributions of abundances for 18 plant species declining over time in an experimentally fragmented landscape in northeast Kansas, USA. If patch size effects dominate, early-successional species should persist longer on large patches, but if successional processes dominate, the reverse should hold, because in our system woody plant colonization is accelerated on large patches. To compare the patterns in abundance among patch sizes, we characterize joint shifts in local abundance and occupancy with a new metric: rank occupancy–abundance profiles (ROAPs). As succession progressed, statistically significant patch size effects emerged for 11 of 18 species. More early-successional species persisted longer on large patches, despite the fact that woody encroachment (succession) progressed faster in these patches. Clonal perennial species persisted longer on large patches compared to small patches. All species that persisted longer on small patches were annuals that recruit from the seed bank each year. The degree to which species declined in occupancy vs. abundance varied dramatically among species: some species declined first in occupancy, others remained widespread or even expanded their distribution, even as they declined in local abundance. Consequently, species exhibited various types of rarity as succession progressed. Understanding the effect of fragmentation on extinction trajectories requires a species-by-species approach encompassing both occupancy and local abundance. We propose that ROAPs provide a useful tool for comparing the distribution of local abundances among landscape types, years, and species

Effects of Clonal Reproduction of Evolutionary Lag and Evolutionary Rescue

Evolutionary lag—the difference between mean and optimal phenotype in the current environment—is of keen interest in light of rapid environmental change. Many ecologically important organisms have life histories that include stage structure and both sexual and clonal reproduction, yet how stage structure and clonality interplay to govern a population’s rate of evolution and evolutionary lag is unknown. Effects of clonal reproduction on mean phenotype partition into two portions: one that is phenotype dependent, and another that is genotype dependent. This partitioning is governed by the association between the nonadditive genetic plus random environmental component of phenotype of clonal offspring and their parents. While clonality slows phenotypic evolution toward an optimum, it can dramatically increase population survival after a sudden step change in optimal phenotype. Increased adult survival slows phenotypic evolution but facilitates population survival after a step change; this positive effect can, however, be lost given survival-fecundity trade-offs. Simulations indicate that the benefits of increased clonality under environmental change greatly depend on the nature of that change: increasing population persistence under a step change while decreasing population persistence under a continuous linear change requiring de novo variation. The impact of clonality on the probability of persistence for species in a changing world is thus inexorably linked to the temporal texture of the change they experience

The Design and Operation of The Keck Observatory Archive

The Infrared Processing and Analysis Center (IPAC) and the W. M. Keck Observatory (WMKO) operate an archive for the Keck Observatory. At the end of 2013, KOA completed the ingestion of data from all eight active observatory instruments. KOA will continue to ingest all newly obtained observations, at an anticipated volume of 4 TB per year. The data are transmitted electronically from WMKO to IPAC for storage and curation. Access to data is governed by a data use policy, and approximately two-thirds of the data in the archive are public.Comment: 12 pages, 4 figs, 4 tables. Presented at Software and Cyberinfrastructure for Astronomy III, SPIE Astronomical Telescopes + Instrumentation 2014. June 2014, Montreal, Canad