4 research outputs found
3D-Printed Paper Spray Ionization Cartridge with Fast Wetting and Continuous Solvent Supply Features
We
report the development of a 3D-printed cartridge for paper spray
ionization (PSI) that can be used almost immediately after solvent
introduction in a dedicated reservoir and allows prolonged spray generation
from a paper tip. The fast wetting feature described in this work
is based on capillary action through paper and movement of fluid between
paper and the cartridge material (polylactic acid, PLA). The influence
of solvent composition, PLA conditioning of the cartridge with isopropanol,
and solvent volume introduced into the reservoir have been investigated
with relation to wetting time and the amount of solvent consumed for
wetting. Spray has been demonstrated with this cartridge for tens
of minutes, without any external pumping. It is shown that fast wetting
and spray generation can easily be achieved using a number of solvent
mixtures commonly used for PSI. The PSI cartridge was applied to the
analysis of lidocaine from a paper tip using different solvent mixtures,
and to the analysis of lidocaine from a serum sample. Finally, a demonstration
of online paper chromatography–mass spectrometry is given
Boron-Doped Diamond Electrodes for the Electrochemical Oxidation and Cleavage of Peptides
Electrochemical oxidation of peptides
and proteins is traditionally
performed on carbon-based electrodes. Adsorption caused by the affinity
of hydrophobic and aromatic amino acids toward these surfaces leads
to electrode fouling. We compared the performance of boron-doped diamond
(BDD) and glassy carbon (GC) electrodes for the electrochemical oxidation
and cleavage of peptides. An optimal working potential of 2000 mV
was chosen to ensure oxidation of peptides on BDD by electron transfer
processes only. Oxidation by electrogenerated OH radicals took place
above 2500 mV on BDD, which is undesirable if cleavage of a peptide
is to be achieved. BDD showed improved cleavage yield and reduced
adsorption for a set of small peptides, some of which had been previously
shown to undergo electrochemical cleavage C-terminal to tyrosine (Tyr)
and tryptophan (Trp) on porous carbon electrodes. Repeated oxidation
with BDD electrodes resulted in progressively lower conversion yields
due to a change in surface termination. Cathodic pretreatment of BDD
at a negative potential in an acidic environment successfully regenerated
the electrode surface and allowed for repeatable reactions over extended
periods of time. BDD electrodes are a promising alternative to GC
electrodes in terms of reduced adsorption and fouling and the possibility
to regenerate them for consistent high-yield electrochemical cleavage
of peptides. The fact that OH-radicals can be produced by anodic oxidation
of water at elevated positive potentials is an additional advantage
as they allow another set of oxidative reactions in analogy to the
Fenton reaction, thus widening the scope of electrochemistry in protein
and peptide chemistry and analytics
Effect of iTRAQ Labeling on the Relative Abundance of Peptide Fragment Ions Produced by MALDI-MS/MS
The identification of proteins in proteomics experiments
is usually
based on mass information derived from tandem mass spectrometry data.
To improve the performance of the identification algorithms, additional
information available in the fragment peak intensity patterns has
been shown to be useful. In this study, we consider the effect of
iTRAQ labeling on the fragment peak intensity patterns of singly charged
peptides from MALDI tandem MS data. The presence of an iTRAQ-modified
basic group on the N-terminus leads to a more pronounced set of <i>b</i>-ion peaks and distinct changes in the abundance of specific
peptide types. We performed a simple intensity prediction by using
a decision-tree machine learning approach and were able to show that
the relative ion abundance in a spectrum can be correctly predicted
and distinguished from closely related sequences. This information
will be useful for the development of improved method-specific intensity-based
protein identification algorithms
A New Strategy To Stabilize Oxytocin in Aqueous Solutions: II. Suppression of Cysteine-Mediated Intermolecular Reactions by a Combination of Divalent Metal Ions and Citrate
A series of studies have been conducted to develop a heat-stable
liquid oxytocin formulation. Oxytocin degradation products have been
identified including citrate adducts formed in a formulation with
citrate buffer. In a more recent study we have found that divalent
metal salts in combination with citrate buffer strongly stabilize
oxytocin in aqueous solutions (Avanti, C.; et al. <i>AAPS J.</i> <b>2011</b>, <i>13</i>, 284–290). The aim
of the present investigation was to identify various degradation products
of oxytocin in citrate-buffered solution after thermal stress at a
temperature of 70 °C for 5 days and the changes in degradation
pattern in the presence of divalent metal ions. Degradation products
of oxytocin in the citrate buffer formulation with and without divalent
metal ions were analyzed using liquid chromatography–mass spectrometry/mass
spectrometry (LC–MS/MS). In the presence of divalent metal
ions, almost all degradation products, in particular citrate adduct,
tri- and tetrasulfides, and dimers, were greatly reduced in intensity.
No significant difference in the stabilizing effect was found among
the divalent metal ions Ca<sup>2+</sup>, Mg<sup>2+</sup>, and Zn<sup>2+</sup>. The suppressed degradation products all involve the cysteine
residues. We therefore postulate that cysteine-mediated intermolecular
reactions are suppressed by complex formation of the divalent metal
ion and citrate with oxytocin, thereby inhibiting the formation of
citrate adducts and reactions of the cysteine thiol group in oxytocin