Instabilities and turbulence-like dynamics in an oppositely driven binary particle mixture

Using extensive particle-based simulations, we investigate out-of-equilibrium pattern dynamics in an oppositely driven binary particle system in two dimensions. A surprisingly rich dynamical behavior including lane formation, jamming, oscillation and turbulence-like dynamics is found. The ratio of two friction coefficients is a key parameter governing the stability of lane formation. When the friction coefficient transverse to the external force direction is sufficiently small compared to the longitudinal one, the lane structure becomes unstable to shear-induced disturbances, and the system eventually exhibits a dynamical transition into a novel turbulence-like phase characterized by random convective flows. We numerically construct an out-of-equilibrium phase diagram. Statistical analysis of complex spatio-temporal dynamics of the fully nonlinear turbulence-like phase suggests its apparent reminiscence to the swarming dynamics in certain active matter systems.Comment: 6 pages, 6 figures, accepted for publication in EP

High-Energy Electron Transfer Dissociation (HE-ETD) Using Alkali Metal Targets for Sequence Analysis of Post-Translational Peptides

Post-translational modifications (PTMs) of proteins are important in the activation, localization, and regulation of protein function in vivo. The usefulness of electron capture dissociation (ECD) and electron-transfer dissociation (ETD) in tandem mass spectrometry (MS/MS) using low-energy (LE) trap type mass spectrometer is associated with no loss of a labile PTM group regarding peptide and protein sequencing. The experimental results of high-energy (HE) collision induced dissociation (CID) using the Xe and Cs targets and LE-ETD were compared for doubly-phosphorylated peptides TGFLT(p)EY(p)VATR (1). Although HE-CID using the Xe target did not provide information on the amino acid sequence, HE-CID using the Cs target provided all the z-type ions without loss of the phosphate groups as a result of HE-ETD process, while LE-ETD using fluoranthene anion gave only z-type ions from z5 to z11. The difference in the results of HE-CID between the Xe and Cs targets demonstrated that HE-ETD process with the Cs target took place much more dominantly than collisional activation. The difference between HE-ETD using Cs targets and LE-ETD using the anion demonstrated that mass discrimination was much weaker in the high-energy process. HE-ETD was also applied to three other phosphopeptides YGGMHRQEX(p)VDC (2: X = S, 3: X = T, 4: X = Y). The HE-CID spectra of the doubly-protonated phosphopeptides (= [M + 2H]2+) of 2, 3, and 4 using the Cs target showed a very similar feature that the c-type ions from c7 to c11 and the z-type ions from z7 to z11 were formed via N–Cα bond cleavage without a loss of the phosphate group

Renoprotective effects of atorvastatin compared with pravastatin on progression of early diabetic nephropathy

Introduction: Several studies have shown that statins suppress the progression of diabetic nephropathy. However, few reports have directly compared the renoprotective effects between potent and conventional statins. Materials and Methods: Patients with diabetic nephropathy, selected as those with a serum creatinine level of 0.9-1.5 mg/dL and simultaneously having either microalbuminuria or positive proteinuria, were randomly assigned to one of three groups: a conventional diet therapy group, a group given 10 mg of pravastatin and a group given 10 mg of atorvastatin. Renal function was evaluated before and after a 12-month period of therapy. Results: The atorvastatin group had a significant decrease in low-density lipoprotein cholesterol at 3 months and thereafter compared with the other groups. The urinary albumin-to-creatinine ratio significantly decreased in the atorvastatin group; the degree of this decrease was significantly greater than that in the diet therapy group. The kidney function estimated with cystatin C (CysC) and the estimated glomerular filtration rate calculated from CysC were significantly preserved in the atorvastatin group compared with the pravastatin group. In a multivariate regression analysis, the use of atorvastatin was the only explanatory variable for the changes in CysC; this was independent of changes in low-density lipoprotein cholesterol. Conclusions: Atorvastatin is more effective than pravastatin for the prevention of increase in CysC, and this renoprotective effect was considered to a result of the pleiotropic effect of atorvastatin independent of its lipid-lowering effect. This study was registered with UMIN (no. UMIN 000001774). © 2014 The Authors

A Chemometrics-driven Strategy for the Bioactivity Evaluation of Complex Multicomponent Systems and the Effective Selection of Bioactivity-predictive Chemical Combinations

Although understanding their chemical composition is vital for accurately predicting the bioactivity of multicomponent drugs, nutraceuticals, and foods, no analytical approach exists to easily predict the bioactivity of multicomponent systems from complex behaviors of multiple coexisting factors. We herein represent a metabolic profiling (MP) strategy for evaluating bioactivity in systems containing various small molecules. Composition profiles of diverse bioactive herbal samples from 21 green tea extract (GTE) panels were obtained by a high-throughput, non-targeted analytical procedure. This employed the matrix-assisted laser desorption ionization-mass spectrometry (MALDI-MS) technique, using 1,5-diaminonaphthalene (1,5-DAN) as the optical matrix for detecting GTE-derived components. Multivariate statistical analyses revealed differences among the GTEs in their antioxidant activity, oxygen radical absorbance capacity (ORAC). A reliable bioactivity-prediction model was constructed to predict the ORAC of diverse GTEs from their compositional balance. This chemometric procedure allowed the evaluation of GTE bioactivity by multicomponent rather than single-component information. The bioactivity could be easily evaluated by calculating the summed abundance of a few selected components that contributed most to constructing the prediction model. 1,5-DAN-MALDI-MS-MP, using diverse bioactive sample panels, represents a promising strategy for screening bioactivity-predictive multicomponent factors and selecting effective bioactivity-predictive chemical combinations for crude multicomponent systems

Electronically modified single wall carbon nanohorns with iodine adsorption

Tailoring electronic properties of single wall carbon nanohorn (SWCNH) is expected to develop the application potential in various fields. SWCNH is efficiently modified with iodine molecules by liquid phase adsorption. The adsorption isotherm of iodine on SWCNH was Langmuirian with the saturated adsorption amount of 185 +/- 10 mg g (1) (coverage 0.18), indicating a specific interaction between SWCNH and iodine. The DC electrical conductivity of SWCNH film prepared by dip-coating method increased with the iodine adsorption amount almost by a factor 10.ArticleCHEMICAL PHYSICS LETTERS. 501(4-6):485-490 (2011)journal articl

Trace Analysis of Cadmium in Rice by the Selective Excitation of L-Shell X-ray Fluorescence

米中のカドミウムについてCd-Lα線を用いる蛍光X線分析の最適化を行った.米中に多量に含まれるカリウムのKα線による妨害を防ぐため,K吸収端下の励起条件を用いて,カドミウムの選択励起を行った.選択励起法によりカリウム由来のバックグラウンドは大きく低減することができるが,非弾性共鳴散乱(RIXS)によるバックグラウンドが検出限界を支配していることが明らかになった.最適な励起X線エネルギーの検討を行った結果,3580 eV励起で最適化された.さらに,試料の保持方法についても検討を行い,6 μm厚のポリプロピレン膜上に米粉末を固定化する方法によりバックグラウンドを低減した.最適条件での米中カドミウムの検出限界として0.34 ppmを実現した.The trace analysis of cadmium in rice was carried out by using L-shell excitation of X-ray fluorescence analysis. To reduce the influence of co-existing potassium, the excitation X-ray energy was selected below the absorption edge of potassium. It was found that the remaining background was from resonant inelastic X-ray scattering (RIXS) from potassium. The excitation X-ray energy dependence of the RIXS spectra from KCl was measured, and the optimized X-ray energy was 3580 eV. Optimization of the sample support was also investigated, and the rice flour was fixed onto a film of 6 μm thick polypropylene with polyvinyl acetate. The detection limit of cadmium in rice was 0.34 ppm under the optimized condition