The exposure of the Great Barrier Reef to ocean acidification

The Great Barrier Reef (GBR) is founded on reef-building corals. Corals build their exoskeleton with aragonite, but ocean acidification is lowering the aragonite saturation state of seawater (Omega(a)). The downscaling of ocean acidification projections from global to GBR scales requires the set of regional drivers controlling Omega(a) to be resolved. Here we use a regional coupled circulation-biogeochemical model and observations to estimate the Omega(a) experienced by the 3,581 reefs of the GBR, and to apportion the contributions of the hydrological cycle, regional hydrodynamics and metabolism on Omega(a) variability. We find more detail, and a greater range (1.43), than previously compiled coarse maps of Omega(a) of the region (0.4), or in observations (1.0). Most of the variability in Omega(a) is due to processes upstream of the reef in question. As a result, future decline in Omega(a) is likely to be steeper on the GBR than currently projected by the IPCC assessment report

Dispatchability, Energy Security, and Reduced Capital Cost in Tidal-Wind and Tidal-Solar Energy Farms

The global tidal energy resource for electricity generation is small, and converting tidal kinetic energy to electricity is expensive compared to solar-photovoltaic or land-based wind turbine generators. However, as the renewable energy content in electricity supplies grows, the need to stabilise these supplies increases. This paper describes tidal energy’s potential to reduce intermittency and variability in electricity supplied from solar and wind power farms while lowering the capital expenditure needed to improve dispatchability. The paper provides a model and hypothetical case studies to demonstrate how sharing energy storage between tidal stream power generators and wind or solar power generators can mitigate the level, frequency, and duration of power loss from wind or solar PV farms. The improvements in dispatchability use tidal energy’s innate regularity and take account of tidal asymmetry and extended duration low-velocity neap tides. The case studies are based on a national assessment of Australian tidal energy resources carried out from 2018 to 2021

eReefs: An operational information system for managing the Great Barrier Reef

eReefs is a comprehensive interoperable information platform that has been developed for the Great Barrier Reef (GBR) region to provide users with access to improved environmental intelligence allowing them to assess past, present, and future conditions, as well as management options to mitigate the risks associated with multiple and sometimes competing uses of the GBR. eReefs is built upon an integrated system of data, catchment and marine models, visualisation, reporting and decision support tools that span the entire GBR area. This communication briefly describes eReefs architecture and components and provides examples of applications that have been used to inform policy and management decisions, and finally discusses challenges and key learnings and considers future developments and applications

CSIRO Environmental Modelling Suite (EMS): Scientific description of the optical and biogeochemical models (vB3p0)

Since the mid-1990s, Australia's Commonwealth Science Industry and Research Organisation (CSIRO) has been developing a biogeochemical (BGC) model for coupling with a hydrodynamic and sediment model for application in estuaries, coastal waters and shelf seas. The suite of coupled models is referred to as the CSIRO Environmental Modelling Suite (EMS) and has been applied at tens of locations around the Australian continent. At a mature point in the BGC model's development, this paper presents a full mathematical description, as well as links to the freely available code and user guide. The mathematical description is structured into processes so that the details of new parameterisations can be easily identified, along with their derivation. In EMS, the underwater light field is simulated by a spectrally resolved optical model that calculates vertical light attenuation from the scattering and absorption of 20+ optically active constituents. The BGC model itself cycles carbon, nitrogen, phosphorous and oxygen through multiple phytoplankton, zooplankton, detritus and dissolved organic and inorganic forms in multiple water column and sediment layers. The water column is dynamically coupled to the sediment to resolve deposition, resuspension and benthic-pelagic biogeochemical fluxes. With a focus on shallow waters, the model also includes detailed representations of benthic plants such as seagrass, macroalgae and coral polyps. A second focus has been on, where possible, the use of geometric derivations of physical limits to constrain ecological rates. This geometric approach generally requires population-based rates to be derived from initially considering the size and shape of individuals. For example, zooplankton grazing considers encounter rates of one predator on a prey field based on summing relative motion of the predator with the prey individuals and the search area; chlorophyll synthesis includes a geometrically derived self-shading term; and the bottom coverage of benthic plants is calculated from their biomass using an exponential form derived from geometric arguments. This geometric approach has led to a more algebraically complicated set of equations when compared to empirical biogeochemical model formulations based on populations. But while being algebraically complicated, the model has fewer unconstrained parameters and is therefore simpler to move between applications than it would otherwise be. The version of EMS described here is implemented in the eReefs project that delivers a near-real-time coupled hydrodynamic, sediment and biogeochemical simulation of the Great Barrier Reef, northeast Australia, and its formulation provides an example of the application of geometric reasoning in the formulation of aquatic ecological processes. </p

CSIRO Environmental Modelling Suite (EMS): Scientific description of the optical and biogeochemical models (vB3p0)

Since the mid 1990s, Australia's Commonwealth Science Industry and Research Organisation (CSIRO) has developed a biogeochemical (BGC) model for coupling with a hydrodynamic and sediment model for application in estuaries, coastal waters and shelf seas. The suite of coupled models is referred to as the CSIRO Environmental Modelling Suite (EMS) and has been applied at tens of locations around the Australian continent. At a mature point in the BGC model's development, this paper presents a full mathematical description, as well as links to the freely available code and User Guide. The mathematical description is structured into processes so that the details of new parameterisations can be easily identified, along with their derivation. The EMS BGC model cycles carbon, nitrogen, phosphorous and oxygen through multiple phytoplankton, zooplankton, detritus and dissolved organic and inorganic forms in multiple water column and sediment layers. The underwater light field is simulated by a spectrally-resolved optical model that includes the calculation of water-leaving reflectance for validation with remote sensing. The water column is dynamically coupled to the sediment to resolve deposition, resuspension and benthic-pelagic biogeochemical fluxes. With a focus on shallow waters, the model also includes particularly-detailed representations of benthic plants such as seagrass, macroalgae and coral polyps. A second focus has been on, where possible, the use of geometric derivations of physical limits to constrain ecological rates, which generally requires population-based rates to be derived from initially considering the size and shape of individuals. For example, zooplankton grazing considers encounter rates of one predator on a prey field based on summing relative motion of the predator with the prey individuals and the search area, chlorophyll synthesis includes a geometrically-derived self-shading term, and the bottom coverage of benthic plants is generically-related to their biomass using an exponential form derived from geometric arguments. This geometric approach has led to a more algebraically-complicated set of equations when compared to more empirical biogeochemical model formulations. But while being algebraically-complicated, the model has fewer unconstrained parameters and is therefore simpler to move between applications than it would otherwise be. The version of the biogeochemistry described here is implemented in the eReefs project that is delivering a near real time coupled hydrodynamic, sediment and biogeochemical simulation of the Great Barrier Reef, northeast Australia, and its formulation provides an example of the application of geometric reasoning in the formulation of aquatic ecological processes

The Fitzroy contaminants project a study of the nutrient and fine-sediment dynamics of the Fitzroy Estuary and Keppel Bay /

The Fitzroy catchment is the largest Queensland catchment discharging to the Great Barrier Reef (GBR) lagoon. Sediments and nutrients together with anthropogenic pollutants originating upstream in the catchment are discharged from the Fitzroy River via the Fitzroy Estuary (FE) and ultimately into Keppel Bay (KB). The estuary and the bay act as natural chemical reactors where the materials delivered undergo chemical and physical transformations before some are deposited and stored in the growing deltaic and beach areas, with the remainder transported eastward to the southern zone of the GBR lagoon. The Reef Water Quality Protection Plan is a recent State–Commonwealth initiative which aims to improve land-use management practices within many Queensland catchments with the intent of reducing the loads of sediments, nutrients and other potentially deleterious substances entering the GBR lagoon. The background knowledge to make realistic predictions of the response of the FE and KB ecosystems to changed sediment and nutrient deliveries did not exist when this project started. The Agricultural Contaminants Project (Project AC) was developed to address these knowledge gaps and to produce a predictive framework to aid managers in the evaluation of various load reduction strategies