Computationally efficient algorithms for the two-dimensional Kolmogorov-Smirnov test

Goodness-of-fit statistics measure the compatibility of random samples against some theoretical or reference probability distribution function. The classical one-dimensional Kolmogorov-Smirnov test is a non-parametric statistic for comparing two empirical distributions which defines the largest absolute difference between the two cumulative distribution functions as a measure of disagreement. Adapting this test to more than one dimension is a challenge because there are 2^d-1 independent ways of ordering a cumulative distribution function in d dimensions. We discuss Peacock's version of the Kolmogorov-Smirnov test for two-dimensional data sets which computes the differences between cumulative distribution functions in 4n^2 quadrants. We also examine Fasano and Franceschini's variation of Peacock's test, Cooke's algorithm for Peacock's test, and ROOT's version of the two-dimensional Kolmogorov-Smirnov test. We establish a lower-bound limit on the work for computing Peacock's test of Omega(n^2.lg(n)), introducing optimal algorithms for both this and Fasano and Franceschini's test, and show that Cooke's algorithm is not a faithful implementation of Peacock's test. We also discuss and evaluate parallel algorithms for Peacock's test

The development of air shower in the iron absorber

The iron open-sandwich experiments to observe one dimensional development of individual air showers were carried out at Akeno Observatory. One dimensional energy flow, incident energy and production height of shower is estimated using the data of size and age obtained from the above experiment and simple calculation

The performance of thin NaI(Tl) scintillator plate for dark matter search

A thin (0.05cm) and wide area (5cmX5cm) NaI(Tl) scintillator was developed. The performance of the thin NaI(Tl) plate, energy resolution, single photoelectron energy and position sensitivity were tested. An excellent energy resolution of 20% (FWHM) at 60keV was obtained. The single photoelectron energy was calculated to be approximately 0.42 0.02keV. Position information in the 5cmx5cm area of the detector was also obtained by analyzing the ratio of the number of photons collected at opposite ends of the detector. The position resolution was obtained to be 1cm (FWHM) in the 5cmx5cm area.Comment: 10 pages. Accepted to Journal of Physical Society of Japa

Pressure-Induced Antiferromagnetic Bulk Superconductor EuFe2_2As2_2

We present the magnetic and superconducting phase diagram of EuFe$_2$As$_2$ for $B \parallel c$ and $B \parallel ab$. The antiferromagnetic phase of the Eu$^{2+}$ moments is completely enclosed in the superconducting phase. The upper critical field vs. temperature curves exhibit strong concave curvatures, which can be explained by the Jaccarino-Peter compensation effect due to the antiferromagnetic exchange interaction between the Eu$^{2+}$ moments and conduction electrons.Comment: submitted to the proceedings of the M2S-IX Toky

Detection of telomerase activity in peritoneal lavage fluid from patients with gastric cancer using immunomagnetic beads

Cytologic examination of peritoneal lavage fluid is a useful predictor of peritoneal recurrence in gastric cancer. However, this technique is not overly sensitive and requires special abilities in the cytologist. In this study, telomerase activity was used to detect free cancer cells in peritoneal lavage fluid from patients with gastric cancer. In the first part, 12 lavage-fluid samples obtained from 12 patients with gastric cancer were analysed using the conventional telomeric repeat amplification protocol (TRAP) assay. Three of five patients with early gastric cancer had positive telomerase activity. These false-positive results may have been due to lymphocyte contamination. Furthermore, polymerase chain reaction inhibitors were also detected in the lavage-fluid samples. Therefore, we developed a novel method for elimination of haematopoietic cell and Taq polymerase inhibitors to increase the accuracy of the TRAP assay using immunomagnetic beads, which bind to most normal and neoplastic human epithelial cells. Telomerase activity was found in 10 of 20 (50%) lavage-fluid samples from patients with serosal or subserosal invasion. Cytologic examination was positive in nine of 20 (45%) samples. Both the telomerase activity and cytology were negative in all 14 patients without serosal or subserosal invasion. These results suggest that the TRAP assay combined with immunomagnetic beads might be useful for detection of free cancer cells in the peritoneal space in gastric cancer without the aid of an experienced cytologist. © 2000 Cancer Research Campaig

WIMPs search by means of the highly segmented scintillator

The highly sensitive method to search for WIMPs dark matter particles is proposed. An array of thin NaI(Tl) plate has the great selectivity for distinguishing the WIMPs events and background ones. The principle of signal selection for WIMPs is described. The high sensitivity for SD (spin-dependent) type WIMPs is expected by applying multi-layer system of NaI(Tl) detector.Comment: 11 pages, added some sentences to make the arguments clea

Downregulation of intracellular nm23-H1 prevents cisplatin-induced DNA damage in oesophageal cancer cells: possible association with Na+, K+-ATPase

Previously, we showed that expression of nm23-H1 is associated inversely with sensitivity to cisplatin in human oesophageal squamous cell carcinoma (OSCC). The present study was undertaken to investigate the association of nm23-H1 expression with cisplatin-induced DNA damage in OSCC using antisense nm23-H1 transfectants. YES-2/AS-12, an antisense nm23-H1-transfected OSCC cell line, showed significantly reduced expression of intracellular nm23-H1 protein compared with that in parental YES-2 cells and YES-2/Neo transfectants. Surface expression of nm23-H1 protein was not observed in any of the three cell lines. PCR analysis for DNA damage demonstrated that YES-2/AS-12 cells were more resistant to nuclear and mitochondrial DNA damage by cisplatin than were YES-2/Neo cells. In addition, mitochondrial membrane potentials and DNA fragmentation assays confirmed that YES-2/AS-12 was more resistant than YES-2/Neo to apoptosis induced by cisplatin. In contrast, YES-2/AS-12 was more sensitive to ouabain, a selective inhibitor of Na+, K+-ATPase, than YES-2 and YES-2/Neo. Pre-treatment with ouabain resulted in no differences in cisplatin sensitivity between the three cell lines examined. Intracellular platinum level in YES-2/AS-12 was significantly lower than that in YES-2 and YES-2/Neo following incubation with cisplatin, whereas ouabain pre-treatment resulted in no differences in intracellular platinum accumulations between the three cell lines. Our data support the conclusion that reduced expression of intracellular nm23-H1 in OSCC cells is associated with cisplatin resistance via the prevention of both nuclear and mitochondrial DNA damage and suggest that it may be related to Na+, K+-ATPase activity, which is responsible for intracellular cisplatin accumulation. © 2000 Cancer Research Campaig