162 research outputs found
Spectral anomalies by superposition of polychromatic Gaussian beam and Gaussian vortex beam
We study the spectral property of a composite field superposed by a polychromatic Gaussian beam and a polychromatic Gaussian beam with an embedded mth-order vortex. It is shown that, in the overall spectral shift distribution, there exist m small areas where sharp spectral anomaly takes place, similarly and respectively, which are related with the ratio of the respective amplitudes of the two composite beams and the relative phase between them. Detailed investigation reveals that, for each small area, there exists a "main line", along which spectral switch can be observed
Structure, expression differentiation and evolution of duplicated fiber developmental genes in Gossypium barbadense and G. hirsutum
<p>Abstract</p> <p>Background</p> <p>Both <it>Gossypium hirsutum </it>and <it>G. barbadense </it>probably originated from a common ancestor, but they have very different agronomic and fiber quality characters. Here we selected 17 fiber development-related genes to study their structures, tree topologies, chromosomal location and expression patterns to better understand the interspecific divergence of fiber development genes in the two cultivated tetraploid species.</p> <p>Results</p> <p>The sequence and structure of 70.59% genes were conserved with the same exon length and numbers in different species, while 29.41% genes showed diversity. There were 15 genes showing independent evolution between the A- and D-subgenomes after polyploid formation, while two evolved via different degrees of colonization. Chromosomal location showed that 22 duplicate genes were located in which at least one fiber quality QTL was detected. The molecular evolutionary rates suggested that the D-subgenome of the allotetraploid underwent rapid evolutionary differentiation, and selection had acted at the tetraploid level. Expression profiles at fiber initiation and early elongation showed that the transcripts levels of most genes were higher in Hai7124 than in TM-1. During the primary-secondary transition period, expression of most genes peaked earlier in TM-1 than in Hai7124. Homeolog expression profile showed that A-subgenome, or the combination of A- and D-subgenomes, played critical roles in fiber quality divergence of <it>G. hirsutum </it>and <it>G. barbadense</it>. However, the expression of D-subgenome alone also played an important role.</p> <p>Conclusion</p> <p>Integrating analysis of the structure and expression to fiber development genes, suggests selective breeding for certain desirable fiber qualities played an important role in divergence of <it>G. hirsutum </it>and <it>G. barbadense</it>.</p
The dual role of p63 in cancer
The p53 family is made up of three transcription factors: p53, p63, and p73. These proteins are well-known regulators of cell function and play a crucial role in controlling various processes related to cancer progression, including cell division, proliferation, genomic stability, cell cycle arrest, senescence, and apoptosis. In response to extra- or intracellular stress or oncogenic stimulation, all members of the p53 family are mutated in structure or altered in expression levels to affect the signaling network, coordinating many other pivotal cellular processes. P63 exists as two main isoforms (TAp63 and ΔNp63) that have been contrastingly discovered; the TA and ΔN isoforms exhibit distinguished properties by promoting or inhibiting cancer progression. As such, p63 isoforms comprise a fully mysterious and challenging regulatory pathway. Recent studies have revealed the intricate role of p63 in regulating the DNA damage response (DDR) and its impact on diverse cellular processes. In this review, we will highlight the significance of how p63 isoforms respond to DNA damage and cancer stem cells, as well as the dual role of TAp63 and ΔNp63 in cancer
Reciprocal facilitation between annual plants and burrowing crabs:Implications for the restoration of degraded saltmarshes
Increasing evidence shows that facilitative interactions between species play an essential role in coastal wetland ecosystems. However, there is a lack of understanding of how such interactions can be used for restoration purposes in saltmarsh ecosystems. We therefore studied the mechanisms of reciprocal facilitative interactions between native annual plants, Suaeda salsa, and burrowing crabs, Helice tientsinensis, in a middle-elevation saltmarsh (with generally high plant density and moderate tides) in the Yellow River Delta of China. We investigated the relationship between the densities of the plants and crab burrows in different seasons. Then, we tested whether and how saltmarsh plants and crabs indeed facilitate each other in a series of field and laboratory experiments. Finally, we applied the results by creating a field-scale artificial approach for microtopographic modification to restore a degraded saltmarsh. We found that the density of plant seedlings in spring was positively correlated with the density of crab burrows in the previous autumn; moreover, the density of crab burrows was correlated with the density of plants in summer. The concave-convex surface microtopography created by crabs promoted seed retention and seedling establishment of saltmarsh plants in winter and spring. These plants in turn facilitated crabs by inhibiting predators, providing food and reducing physical stresses for crabs in summer and autumn. The experimental removal of saltmarsh plants decreased crab burrow density, while both transplanting and simulating plants in bare patches promoted crabs. The microtopographic modification, inspired by our new understanding of the interactions between saltmarsh plants and crabs, showed that these degraded saltmarsh ecosystems can be restored by a single ploughing intervention. Synthesis. Our results suggest a reciprocal facilitation between annual plants and burrowing crabs in a middle-elevation saltmarsh ecosystem. This knowledge yielded new restoration options for degraded coastal saltmarshes through the one-time ploughing initiation of microtopographic variation, which could promote the re-establishment of ecosystem engineers and lead to the efficient recovery of pioneer coastal vegetation and associated fauna
Bioactive Constituents of Verbena officinalis Alleviate Inflammation and Enhance Killing Efficiency of Natural Killer Cells
Natural killer (NK) cells play key roles in eliminating pathogen-infected cells. Verbena
officinalis (V. officinalis) has been used as a medical plant in traditional and modern medicine for
its anti-tumor and anti-inflammatory activities, but its effects on immune responses remain largely
elusive. This study aimed to investigate the potential of V. officinalis extract (VO extract) to regulate
inflammation and NK cell functions. We examined the effects of VO extract on lung injury in a mouse
model of influenza virus infection. We also investigated the impact of five bioactive components of
VO extract on NK killing functions using primary human NK cells. Our results showed that oral
administration of VO extract reduced lung injury, promoted the maturation and activation of NK
cells in the lung, and decreased the levels of inflammatory cytokines (IL-6, TNF-α and IL-1β) in the
serum. Among five bioactive components of VO extract, Verbenalin significantly enhanced NK killing
efficiency in vitro, as determined by real-time killing assays based on plate-reader or high-content
live-cell imaging in 3D using primary human NK cells. Further investigation showed that treatment
of Verbenalin accelerated the killing process by reducing the contact time of NK cells with their
target cells without affecting NK cell proliferation, expression of cytotoxic proteins, or lytic granule
degranulation. Together, our findings suggest that VO extract has a satisfactory anti-inflammatory
effect against viral infection in vivo, and regulates the activation, maturation, and killing functions of
NK cells. Verbenalin from V. officinalis enhances NK killing efficiency, suggesting its potential as a
promising therapeutic to fight viral infection
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The MC4R genotype is associated with postpartum weight reduction and glycemic changes among women with prior gestational diabetes: longitudinal analysis
The genetic variants near the Melanocortin-4 receptor gene (MC4R), a key protein regulating energy balance and adiposity, have been related to obesity and glucose metabolism. We aimed to assess whether the MC4R genotype affected longitudinal changes in body weight and glucose metabolism biomarkers among women with prior gestational diabetes mellitus (GDM). The MC4R genotype, postpartum weight reduction, and glycemic changes between after delivery and pregnancy were assessed in a cohort of 1208 Chinese women who had experienced GDM. The adiposity-increasing allele (C) of the MC4R variant rs6567160 was associated with greater postpartum increase of HbA1c (β = 0.08%; P = 0.03) and 2-hour OGTT glucose concentrations (β = 0.25 mmol/L; P = 0.02). In addition, we found an interaction between the MC4R genotype and postpartum weight reduction on changes in fasting plasma glucose (P-interaction = 0.03). We found that the MC4R genotype was associated with postpartum glycemic changes; and the association with fasting glucose were significantly modified by postpartum weight reduction in women who had experienced GDM
Robust estimation of bacterial cell count from optical density
Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data
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