17 research outputs found

    Constructing Matrix Exponential Distributions by Moments and Behavior around Zero

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    This paper deals with moment matching of matrix exponential (ME) distributions used to approximate general probability density functions (pdf). A simple and elegant approach to this problem is applying Padé approximation to the moment generating function of the ME distribution. This approach may, however, fail if the resulting ME function is not a proper probability density function; that is, it assumes negative values. As there is no known, numerically stable method to check the nonnegativity of general ME functions, the applicability of Padé approximation is limited to low-order ME distributions or special cases. In this paper, we show that the Padé approximation can be extended to capture the behavior of the original pdf around zero and this can help to avoid representations with negative values and to have a better approximation of the shape of the original pdf. We show that there exist cases when this extension leads to ME function whose nonnegativity can be verified, while the classical approach results in improper pdf. We apply the ME distributions resulting from the proposed approach in stochastic models and show that they can yield more accurate results

    SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues

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    Variability in SARS-CoV-2 susceptibility and COVID-19 disease severity between individuals is partly due to genetic factors. Here, we identify 4 genomic loci with suggestive associations for SARS-CoV-2 susceptibility and 19 for COVID-19 disease severity. Four of these 23 loci likely have an ethnicity-specific component. Genome-wide association study (GWAS) signals in 11 loci colocalize with expression quantitative trait loci (eQTLs) associated with the expression of 20 genes in 62 tissues/cell types (range: 1:43 tissues/gene), including lung, brain, heart, muscle, and skin as well as the digestive system and immune system. We perform genetic fine mapping to compute 99% credible SNP sets, which identify 10 GWAS loci that have eight or fewer SNPs in the credible set, including three loci with one single likely causal SNP. Our study suggests that the diverse symptoms and disease severity of COVID-19 observed between individuals is associated with variants across the genome, affecting gene expression levels in a wide variety of tissue types

    A first update on mapping the human genetic architecture of COVID-19

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