Number of adaptive steps to a local fitness peak

We consider a population of genotype sequences evolving on a rugged fitness landscape with many local fitness peaks. The population walks uphill until it encounters a local fitness maximum. We find that the statistical properties of the walk length depend on whether the underlying fitness distribution has a finite mean. If the mean is finite, all the walk length cumulants grow with the sequence length but approach a constant otherwise. Experimental implications of our analytical results are also discussed

Evolutionary dynamics on strongly correlated fitness landscapes

We study the evolutionary dynamics of a maladapted population of self-replicating sequences on strongly correlated fitness landscapes. Each sequence is assumed to be composed of blocks of equal length and its fitness is given by a linear combination of four independent block fitnesses. A mutation affects the fitness contribution of a single block leaving the other blocks unchanged and hence inducing correlations between the parent and mutant fitness. On such strongly correlated fitness landscapes, we calculate the dynamical properties like the number of jumps in the most populated sequence and the temporal distribution of the last jump which is shown to exhibit a inverse square dependence as in evolution on uncorrelated fitness landscapes. We also obtain exact results for the distribution of records and extremes for correlated random variables

Composite fermion wave functions as conformal field theory correlators

It is known that a subset of fractional quantum Hall wave functions has been expressed as conformal field theory (CFT) correlators, notably the Laughlin wave function at filling factor $\nu=1/m$ ($m$ odd) and its quasiholes, and the Pfaffian wave function at $\nu=1/2$ and its quasiholes. We develop a general scheme for constructing composite-fermion (CF) wave functions from conformal field theory. Quasiparticles at $\nu=1/m$ are created by inserting anyonic vertex operators, $P_{\frac{1}{m}}(z)$, that replace a subset of the electron operators in the correlator. The one-quasiparticle wave function is identical to the corresponding CF wave function, and the two-quasiparticle wave function has correct fractional charge and statistics and is numerically almost identical to the corresponding CF wave function. We further show how to exactly represent the CF wavefunctions in the Jain series $\nu = s/(2sp+1)$ as the CFT correlators of a new type of fermionic vertex operators, $V_{p,n}(z)$, constructed from $n$ free compactified bosons; these operators provide the CFT representation of composite fermions carrying $2p$ flux quanta in the $n^{\rm th}$ CF Landau level. We also construct the corresponding quasiparticle- and quasihole operators and argue that they have the expected fractional charge and statistics. For filling fractions 2/5 and 3/7 we show that the chiral CFTs that describe the bulk wave functions are identical to those given by Wen's general classification of quantum Hall states in terms of $K$-matrices and $l$- and $t$-vectors, and we propose that to be generally true. Our results suggest a general procedure for constructing quasiparticle wave functions for other fractional Hall states, as well as for constructing ground states at filling fractions not contained in the principal Jain series.Comment: 26 pages, 3 figure

Biomarkers of Inflammation and Fibrosis in Kawasaki Disease Patients Years After Initial Presentation With Low Ejection Fraction.

Background Coronary artery aneurysms and myocarditis are well-recognized complications of Kawasaki disease (KD) but no systematic evaluation of the consequences of myocarditis has been performed in the subset presenting with low ejection fraction (EF). We postulated that more severe myocardial inflammation as evidenced by low EF during the acute phase could lead to late myocardial fibrosis. Methods and Results We measured the carboxyterminal propeptide of procollagen type I (PIPC), soluble suppressor of tumorigenicity 2, galectin-3 (Gal-3), growth-differentiation factor-15, and calprotectin by ELISA in late convalescent blood samples from 16 KD patients who had an EF ≤55% on their initial echocardiogram. Results were compared with samples from sex- and age-matched KD patients with initial EF >60%. In the univariate analysis, the median Gal-3 and PIPC levels in the low EF group were significantly higher than those in the normal EF group (Gal-3: low EF 6.216 versus normal EF 4.976 mg/dL P=0.038, PIPC: low EF 427.4 versus normal EF 265.2 mg/dL, P=0.01). In a multivariable analysis, there were significant differences for Gal-3 and PIPC levels between the low and normal EF groups, adjusting for age, sex, and worst z score. Conclusions Convalescent KD patients with a history of low EF during the acute illness had significantly elevated levels of Gal-3 and PIPC when compared with matched-control KD patients with normal EF. These findings raise concern for myocardial fibrosis as a potential late sequela of the more severe myocarditis experienced by a subset of KD patients during the acute phase

Evolutionary dynamics of the most populated genotype on rugged fitness landscapes

We consider an asexual population evolving on rugged fitness landscapes which are defined on the multi-dimensional genotypic space and have many local optima. We track the most populated genotype as it changes when the population jumps from a fitness peak to a better one during the process of adaptation. This is done using the dynamics of the shell model which is a simplified version of the quasispecies model for infinite populations and standard Wright-Fisher dynamics for large finite populations. We show that the population fraction of a genotype obtained within the quasispecies model and the shell model match for fit genotypes and at short times, but the dynamics of the two models are identical for questions related to the most populated genotype. We calculate exactly several properties of the jumps in infinite populations some of which were obtained numerically in previous works. We also present our preliminary simulation results for finite populations. In particular, we measure the jump distribution in time and find that it decays as $t^{-2}$ as in the quasispecies problem.Comment: Minor changes. To appear in Phys Rev

Correlation between dielectric constant and chemical structure of sodium silicate glasses

Journal URL: http://jap.aip.org/jap/staff.js

Comparison of High-degree Solar Acoustic Frequencies and Asymmetry between Velocity and Intensity Data

Using the local helioseismic technique of ring diagram we analyze the frequencies of high--degree f- and p-modes derived from both velocity and continuum intensity data observed by MDI. Fitting the spectra with asymmetric peak profiles, we find that the asymmetry associated with velocity line profiles is negative for all frequency ranges agreeing with previous observations while the asymmetry of the intensity profiles shows a complex and frequency dependent behavior. We also observe systematic frequency differences between intensity and velocity spectra at the high end of the frequency range, mostly above 4 mHz. We infer that this difference arises from the fitting of the intensity rather than the velocity spectra. We also show that the frequency differences between intensity and velocity do not vary significantly from the disk center to the limb when the spectra are fitted with the asymmetric profile and conclude that only a part of the background is correlated with the intensity oscillations.Comment: Accepted for publication in Astrophysical Journa

Finite-Wavevector Electromagnetic Response of Fractional Quantized Hall States

A fractional quantized Hall state with filling fraction $\nu = p/(2mp+1)$ can be modeled as an integer quantized Hall state of transformed fermions, interacting with a Chern-Simons field. The electromagnetic response function for these states at arbitrary frequency and wavevector can be calculated using a semiclassical approximation or the Random Phase Approximation (RPA). However, such calculations do not properly take into account the large effective mass renormalization which is present in the Chern-Simons theory. We show how the mass renormalization can be incorporated in a calculation of the response function within a Landau Fermi liquid theory approach such that Kohn's theorem and the $f$-sum rules are properly satisfied. We present results of such calculations.Comment: 19 pages (REVTeX 3.0), 5 figures available on request; HU-CMT-93S0

Skyrmions in Higher Landau Levels

We calculate the energies of quasiparticles with large numbers of reversed spins (``skyrmions'') for odd integer filling factors 2k+1, k is greater than or equals 1. We find, in contrast with the known result for filling factor equals 1 (k = 0), that these quasiparticles always have higher energy than the fully polarized ones and hence are not the low energy charged excitations, even at small Zeeman energies. It follows that skyrmions are the relevant quasiparticles only at filling factors 1, 1/3 and 1/5.Comment: 10 pages, RevTe

Does the Sun Shrink with Increasing Magnetic Activity?

We have analyzed the full set of SOHO/MDI f- and p-mode oscillation frequencies from 1996 to date in a search for evidence of solar radius evolution during the rising phase of the current activity cycle. Like Antia et al. (2000), we find that a significant fraction of the f-mode frequency changes scale with frequency; and that if these are interpreted in terms of a radius change, it implies a shrinking sun. Our inferred rate of shrinkage is about 1.5 km/y, which is somewhat smaller than found by Antia et al. We argue that this rate does not refer to the surface, but rather to a layer extending roughly from 4 to 8 Mm beneath the visible surface. The rate of shrinking may be accounted for by an increasing radial component of the rms random magnetic field at a rate that depends on its radial distribution. If it were uniform, the required field would be ~7 kG. However, if it were inwardly increasing, then a 1 kG field at 8 Mm would suffice. To assess contribution to the solar radius change arising above 4Mm, we analyzed the p-mode data. The evolution of the p-mode frequencies may be explained by a magnetic^M field growing with activity. The implications of the near-surface magnetic field changes depend on the anisotropy of the random magnetic field. If the field change is predominantly radial, then we infer an additional shrinking at a rate between 1.1-1.3 km/y at the photosphere. If on the other hand the increase is isotropic, we find a competing expansion at a rate of 2.3 km/y. In any case, variations in the sun's radius in the activity cycle are at the level of 10^{-5} or less, hence have a negligible contribution to the irradiance variations.Comment: 10 pages (ApJ preprint style), 4 figures; accepted for publication in Ap