36,722 research outputs found
A framework of eco-design support
H. Kobayashi, A. Hongu, K. Haruki, S. Doi. A framework of eco-design support. Proceedings First International Symposium on Environmentally Conscious Design and Inverse Manufacturing (EcoDesign ’99), 1999, 680-684. https://doi.org/10.1109/ECODIM.1999.747697
Quantum network coding for quantum repeaters
This paper considers quantum network coding, which is a recent technique that
enables quantum information to be sent on complex networks at higher rates than
by using straightforward routing strategies. Kobayashi et al. have recently
showed the potential of this technique by demonstrating how any classical
network coding protocol gives rise to a quantum network coding protocol. They
nevertheless primarily focused on an abstract model, in which quantum resource
such as quantum registers can be freely introduced at each node. In this work,
we present a protocol for quantum network coding under weaker (and more
practical) assumptions: our new protocol works even for quantum networks where
adjacent nodes initially share one EPR-pair but cannot add any quantum
registers or send any quantum information. A typically example of networks
satisfying this assumption is {\emph{quantum repeater networks}}, which are
promising candidates for the implementation of large scale quantum networks.
Our results thus show, for the first time, that quantum network coding
techniques can increase the transmission rate in such quantum networks as well.Comment: 9 pages, 11figure
Coexistence of distinct charge fluctuations in -(BEDT-TTF)X
Using the Lanczos exact-diagonalization and density-matrix renormalization
group methods, we study the extended Hubbard model at quarter filling defined
on the anisotropic triangular lattice. We focus on charge ordering (CO)
phenomena induced by onsite and intersite Coulomb interactions. We determine
the ground-state phase diagram including three CO phases, i.e., diagonal,
vertical, and three-fold CO phases, based on the calculated results of the hole
density and double occupancy. We also calculate the dynamical density-density
correlation functions and find possible coexistence of the diagonal and
three-fold charge fluctuations in a certain parameter region where the onsite
and intersite interactions compete. Furthermore, the characteristic features of
the optical conductivity for each CO phase are discussed.Comment: 9 pages, 7 figure
Genetic noise control via protein oligomerization
Gene expression in a cell entails random reaction events occurring over
disparate time scales. Thus, molecular noise that often results in phenotypic
and population-dynamic consequences sets a fundamental limit to biochemical
signaling. While there have been numerous studies correlating the architecture
of cellular reaction networks with noise tolerance, only a limited effort has
been made to understand the dynamic role of protein-protein interactions. Here
we have developed a fully stochastic model for the positive feedback control of
a single gene, as well as a pair of genes (toggle switch), integrating
quantitative results from previous in vivo and in vitro studies. We find that
the overall noise-level is reduced and the frequency content of the noise is
dramatically shifted to the physiologically irrelevant high-frequency regime in
the presence of protein dimerization. This is independent of the choice of
monomer or dimer as transcription factor and persists throughout the multiple
model topologies considered. For the toggle switch, we additionally find that
the presence of a protein dimer, either homodimer or heterodimer, may
significantly reduce its random switching rate. Hence, the dimer promotes the
robust function of bistable switches by preventing the uninduced (induced)
state from randomly being induced (uninduced). The specific binding between
regulatory proteins provides a buffer that may prevent the propagation of
fluctuations in genetic activity. The capacity of the buffer is a non-monotonic
function of association-dissociation rates. Since the protein oligomerization
per se does not require extra protein components to be expressed, it provides a
basis for the rapid control of intrinsic or extrinsic noise
Inhibition of Fungi and Gram-Negative Bacteria by Bacteriocin BacTN635 Produced by Lactobacillus plantarum sp. TN635
The aim of this study was to evaluate 54 lactic acid bacteria (LAB) strains isolated from meat, fermented vegetables and dairy products for their capacity to produce antimicrobial activities against several bacteria and fungi. The strain designed TN635 has been selected for advanced studies. The supernatant culture of this strain inhibits the growth of all tested pathogenic including the four Gram-negative bacteria (Salmonella enterica ATCC43972, Pseudomonas aeruginosa ATCC 49189, Hafnia sp. and Serratia sp.) and the pathogenic fungus Candida tropicalis R2 CIP203. Based on the nucleotide sequence of the 16S rRNA gene of the strain TN635 (1,540 pb accession no FN252881) and the phylogenetic analysis, we propose the assignment of our new isolate bacterium as Lactobacillus plantarum sp. TN635 strain. Its antimicrobial compound was determined as a proteinaceous substance, stable to heat and to treatment with surfactants and organic solvents. Highest antimicrobial activity was found between pH 3 and 11 with an optimum at pH = 7. The BacTN635 was purified to homogeneity by a four-step protocol involving ammonium sulfate precipitation, centrifugal microconcentrators with a 10-kDa membrane cutoff, gel filtration Sephadex G-25, and C18 reverse-phase HPLC. SDS-PAGE analysis of the purified BacTN635, revealed a single band with an estimated molecular mass of approximately 4 kDa. The maximum bacteriocin production (5,000 AU/ml) was recorded after a 16-h incubation in Man, Rogosa, and Sharpe (MRS) medium at 30 °C. The mode of action of the partial purified BacTN635 was identified as bactericidal against Listeria ivanovii BUG 496 and as fungistatic against C. tropicalis R2 CIP203
Phenotypic Variation and Bistable Switching in Bacteria
Microbial research generally focuses on clonal populations. However, bacterial cells with identical genotypes frequently display different phenotypes under identical conditions. This microbial cell individuality is receiving increasing attention in the literature because of its impact on cellular differentiation, survival under selective conditions, and the interaction of pathogens with their hosts. It is becoming clear that stochasticity in gene expression in conjunction with the architecture of the gene network that underlies the cellular processes can generate phenotypic variation. An important regulatory mechanism is the so-called positive feedback, in which a system reinforces its own response, for instance by stimulating the production of an activator. Bistability is an interesting and relevant phenomenon, in which two distinct subpopulations of cells showing discrete levels of gene expression coexist in a single culture. In this chapter, we address techniques and approaches used to establish phenotypic variation, and relate three well-characterized examples of bistability to the molecular mechanisms that govern these processes, with a focus on positive feedback.
Analogue peptides for the immunotherapy of human acute myeloid leukemia
Accepted manuscript. The final publication is available at: http://link.springer.com/article/10.1007%2Fs00262-015-1762-9The use of peptide vaccines, enhanced by adjuvants, has shown some efficacy in clinical trials. However, responses are often short-lived and rarely induce notable memory responses. The reason is that self-antigens have already been presented to the immune system as the tumor develops, leading to tolerance or some degree of host tumor cell destruction. To try to break tolerance against self-antigens, one of the methods employed has been to modify peptides at the anchor residues to enhance their ability to bind major histocompatibility complex molecules, extending their exposure to the T-cell receptor. These modified or analogue peptides have been investigated as stimulators of the immune system in patients with different cancers with variable but sometimes notable success. In this review we describe the background and recent developments in the use of analogue peptides for the immunotherapy of acute myeloid leukemia describing knowledge useful for the application of analogue peptide treatments for other malignancies
Lightweight Interactions for Reciprocal Cooperation in a Social Network Game
The construction of reciprocal relationships requires cooperative
interactions during the initial meetings. However, cooperative behavior with
strangers is risky because the strangers may be exploiters. In this study, we
show that people increase the likelihood of cooperativeness of strangers by
using lightweight non-risky interactions in risky situations based on the
analysis of a social network game (SNG). They can construct reciprocal
relationships in this manner. The interactions involve low-cost signaling
because they are not generated at any cost to the senders and recipients.
Theoretical studies show that low-cost signals are not guaranteed to be
reliable because the low-cost signals from senders can lie at any time.
However, people used low-cost signals to construct reciprocal relationships in
an SNG, which suggests the existence of mechanisms for generating reliable,
low-cost signals in human evolution.Comment: 13 pages, 2 figure
T-Cell Memory Responses Elicited by Yellow Fever Vaccine are Targeted to Overlapping Epitopes Containing Multiple HLA-I and -II Binding Motifs
The yellow fever vaccines (YF-17D-204 and 17DD) are considered to be among the safest vaccines and the presence of neutralizing antibodies is correlated with protection, although other immune effector mechanisms are known to be involved. T-cell responses are known to play an important role modulating antibody production and the killing of infected cells. However, little is known about the repertoire of T-cell responses elicited by the YF-17DD vaccine in humans. In this report, a library of 653 partially overlapping 15-mer peptides covering the envelope (Env) and nonstructural (NS) proteins 1 to 5 of the vaccine was utilized to perform a comprehensive analysis of the virus-specific CD4+ and CD8+ T-cell responses. The T-cell responses were screened ex-vivo by IFN-γ ELISPOT assays using blood samples from 220 YF-17DD vaccinees collected two months to four years after immunization. Each peptide was tested in 75 to 208 separate individuals of the cohort. The screening identified sixteen immunodominant antigens that elicited activation of circulating memory T-cells in 10% to 33% of the individuals. Biochemical in-vitro binding assays and immunogenetic and immunogenicity studies indicated that each of the sixteen immunogenic 15-mer peptides contained two or more partially overlapping epitopes that could bind with high affinity to molecules of different HLAs. The prevalence of the immunogenicity of a peptide in the cohort was correlated with the diversity of HLA-II alleles that they could bind. These findings suggest that overlapping of HLA binding motifs within a peptide enhances its T-cell immunogenicity and the prevalence of the response in the population. In summary, the results suggests that in addition to factors of the innate immunity, "promiscuous" T-cell antigens might contribute to the high efficacy of the yellow fever vaccines. © 2013 de Melo et al
Calibration of Super-Kamiokande Using an Electron Linac
In order to calibrate the Super-Kamiokande experiment for solar neutrino
measurements, a linear accelerator (LINAC) for electrons was installed at the
detector. LINAC data were taken at various positions in the detector volume,
tracking the detector response in the variables relevant to solar neutrino
analysis. In particular, the absolute energy scale is now known with less than
1 percent uncertainty.Comment: 24 pages, 16 figures, Submitted to NIM
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