Mean-field theory for the inverse Ising problem at low temperatures

The large amounts of data from molecular biology and neuroscience have lead to a renewed interest in the inverse Ising problem: how to reconstruct parameters of the Ising model (couplings between spins and external fields) from a number of spin configurations sampled from the Boltzmann measure. To invert the relationship between model parameters and observables (magnetisations and correlations) mean-field approximations are often used, allowing to determine model parameters from data. However, all known mean-field methods fail at low temperatures with the emergence of multiple thermodynamic states. Here we show how clustering spin configurations can approximate these thermodynamic states, and how mean-field methods applied to thermodynamic states allow an efficient reconstruction of Ising models also at low temperatures

Autism genetics: searching for specificity and convergence.

Advances in genetics and genomics have improved our understanding of autism spectrum disorders. As many genes have been implicated, we look to points of convergence among these genes across biological systems to better understand and treat these disorders

SU(2) potentials in quantum gravity

We present investigations of the potential between static charges from a simulation of quantum gravity coupled to an SU(2) gauge field on $6^{3}\times 4$ and $8^{3}\times 4$ simplicial lattices. In the well-defined phase of the gravity sector where geometrical expectation values are stable, we study the correlations of Polyakov loops and extract the corresponding potentials between a source and sink separated by a distance $R$. In the confined phase, the potential has a linear form while in the deconfined phase, a screened Coulombic behavior is found. Our results indicate that quantum gravitational effects do not destroy confinement due to non-abelian gauge fields.Comment: 3 pages, contribution to Lattice 94 conference, uuencoded compressed postscript fil

On the energy momentum dispersion in the lattice regularization

For a free scalar boson field and for U(1) gauge theory finite volume (infrared) and other corrections to the energy-momentum dispersion in the lattice regularization are investigated calculating energy eigenstates from the fall off behavior of two-point correlation functions. For small lattices the squared dispersion energy defined by $E_{\rm dis}^2=E_{\vec{k}}^2-E_0^2-4\sum_{i=1}^{d-1}\sin(k_i/2)^2$ is in both cases negative ($d$ is the Euclidean space-time dimension and $E_{\vec{k}}$ the energy of momentum $\vec{k}$ eigenstates). Observation of $E_{\rm dis}^2=0$ has been an accepted method to demonstrate the existence of a massless photon ($E_0=0$) in 4D lattice gauge theory, which we supplement here by a study of its finite size corrections. A surprise from the lattice regularization of the free field is that infrared corrections do {\it not} eliminate a difference between the groundstate energy $E_0$ and the mass parameter $M$ of the free scalar lattice action. Instead, the relation $E_0=\cosh^{-1} (1+M^2/2)$ is derived independently of the spatial lattice size.Comment: 9 pages, 2 figures. Parts of the paper have been rewritten and expanded to clarify the result

Configuration Space for Random Walk Dynamics

Applied to statistical physics models, the random cost algorithm enforces a Random Walk (RW) in energy (or possibly other thermodynamic quantities). The dynamics of this procedure is distinct from fixed weight updates. The probability for a configuration to be sampled depends on a number of unusual quantities, which are explained in this paper. This has been overlooked in recent literature, where the method is advertised for the calculation of canonical expectation values. We illustrate these points for the $2d$ Ising model. In addition, we proof a previously conjectured equation which relates microcanonical expectation values to the spectral density.Comment: Various minor changes, appendix added, Fig. 2 droppe

Metastable π\pi-junction between an s±_\pm-wave and an s-wave superconductor

We examine a contact between a superconductor whose order parameter changes sign across the Brillioun zone, and an ordinary, uniform-sign superconductor. Within a Ginzburg-Landau type model, we find that if the the barrier between the two superconductors is not too high, the frustration of the Josephson coupling between different portions of the Fermi surface across the contact can lead to surprising consequences. These include time-reversal symmetry breaking at the interface and unusual energy-phase relations with multiple local minima. We propose this mechanism as a possible explanation for the half-integer flux quantum transitions in composite niobium--iron pnictide superconducting loops, which were discovered in a recent experiment [Chen et al., Nature Phys. \textbf{6},260 (2010)].Comment: 5 pages, 4 figures; Published versio