Effect of the presence of virus-like particles on bacterial growth in sunlit xurface and dark deep ocean environments in the southern East China Sea

© The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Tsai, A.-Y., Lin, Y.-T., & Gong, G.-C. Effect of the presence of virus-like particles on bacterial growth in sunlit xurface and dark deep ocean environments in the southern East China Sea. Water, 13(20), (2021): 2934, https://doi.org/10.3390/w13202934.Virus-like particles (VLPs) are thought to increase the dissolved organic carbon by releasing the contents of the host cell, which, in turn, can affect bacterial growth in natural aquatic environments. Yet, experimental tests have shown that the effect of VLPs on the bacterial growth rate at different depths has seldom been studied. Bacteria–VLP interaction and the effect of VLPs on bacterial growth rate in the sunlit surface (3 m) and dark, deep ocean (130 m) environments were first explored at a test site in the southern East China Sea of the northwest Pacific. Our experimental results indicated that bacterial and virus-like particle (VLP) abundance decreased with depth from 0.8 ± 0.3 × 105 cells mL−1 and 1.8 ± 0.4 × 106 VLPs mL−1 at 3 m to 0.4 ± 0.1 × 105 cells mL−1 and 1.4 ± 0.3 × 106 VLPs mL−1 at 130 m. We found that the abundance of VLPs to Bacteria Ratio (VBR) in the dark deep ocean (VBR = 35.0 ± 5.6) was higher than in the sunlit surface environment (VBR = 22.5 ± 2.1). The most interesting finding is that in the dark, deep ocean region the bacterial growth rate in the presence of VLPs was higher (0.05 h−1) than that in virus-diluted treatments (0.01 h−1). However, there was no significant difference in the bacterial growth rates between the treatments in the sunlit surface ocean region. Deep-sea ecosystems are dark and extreme environments that lack primary photosynthetic production, and our estimates imply that the contribution of recycled carbon by viral lysis is highly significant for bacterial growth in the dark, deep ocean environment. Further work for more study sites is needed to identify the relationship of VLPs and their hosts to enable us to understand the role of VLPs at different depths in the East China Sea.The research was supported by RFBR projects 18-44-920026, and the Ministry of Science and Technology, Taiwan, grant number NSC 109-2611-M-019-013 and NSC 110-2611-M-019-005

Importance of the Viral Shunt in Nitrogen Cycling in Synechococcus Spp. Growth in Subtropical Western Pacific Coastal Waters

Viruses play an important role in aquatic environments in bacteria and phytoplankton mortality and also in carbon and nutrient recycling through the lysis of living cells. However, the effects of nitrogen regenerated by viral lysis on the growth of picophytoplankton are rarely studied. This study investigated whether the presence of viruses has a positive effect on the daytime frequency of cell division in Synechococcus spp. in the coastal waters of the western subtropical Pacific Ocean. Using cell incubation with natural viral loads and reduced virus treatments, we characterized the abundance and frequency of cell division in Synechococcus spp. over time. Our results clearly showed that during the daytime as much as 30% of Synechococcus spp. were dividing in natural virus-containing samples, a proportion six times that found in the virus-diluted treatment groups (5%). These results suggest that viruses can exert significant effects on nutrient regeneration, enhancing daytime cell division rates in Synechococcus spp

Tidal Effects on Circulation in and near the East China Sea

We incorporate tidal currents into a previously validated, three-dimensional, subtidal circulation model to assess tidal effects on the circulation in and around the East China Sea. Of particular interest is the tide-enhanced Changjiang plume dispersal and circulation in the southern East China Sea. The modeling results show that without tides, the Changjiang plume in summer presents itself as a stagnant, expansive pool in regions bordering the northern East China Sea and Yellow Sea, too far north and too accumulating relative to observations. The winter plume dispersal pushed by the north-northeast monsoon follows the China coastline southeastward as a coastal current that matches more closely with observations with or without tides. Incorporating the effect of tides brings the model closer to observation, especially in summer. During summer the Taiwan Warm Current shifts to lower latitudes, enhances upwelling off southeast China and induces a southward tidal residual coastal flow off southeast China. Tides also induce the observed seaward detachment of the summer plume. In winter, the prevailing north-northeast monsoon suppresses the Taiwan Warm Current to the minimum. However, if the winter monsoon is weakened for a few weeks, the Taiwan Warm Current reappears and these three mechanisms begin to operate as in summer. CTD surveys and satellite observations south of the Changjiang River estuary contribute to a better understanding of the tidal effects on regional ocean currents

The Effects of Light and Nitrate Levels on the Relationship Between Nitrate Reductase Activity and (NO3-)-N-15 Uptake: Field Observations in the East China Sea

Nitrate reductase activity (NRA) and 15NO3- uptake (NU) were determined in the East China Sea and the adjoining Kuroshio in May 1996, at six stations covering a range of hydrographic conditions: the nutrient-rich and fresher plume of Changjiang Diluted Water along the Chinese coast, the nutrient-rich upwelling Kuroshio Subsurface Water at the shelf edge northeast of Taiwan, the oligotrophic Kuroshio Surface Water and the mixing zones among these water masses on the shelf. The values of NRA in the surface mixed layer ranged between 16 and 0.1 nM-N h-1, whereas those of NU ranged between 37 and 1 nM-N h-1. Higher NRA and NU were found in the frontal zone between the coastal and shelf waters and in the upwelling zone, whereas the lowest values were found in the surface Kuroshio. The NRA/Chl a ratio increased linearly with increasing NU/primary production ratio in the sequence: Kuroshio \u3c coastal plume \u3c upwelling zone and mixing zones in the shelf. This is probably a reflection of the varying nutrient condition and the relative importance of NU in sustaining the biomass in these regions. In nitrate- and light-replete waters, the average NU/NRA was 1.0 +/- 0.3. NRA was linearly related to NU so that NU = 1.08 (+/- 0.07)NRA (r(2) = 0.79). Thus, NRA may be used for estimating NU in these waters. In nitrate deficient and light-replete waters, the average NU/NRA was 4 +/- 4. These high and variable values of NU/NRA might have been caused by an over-estimation of NU as a result of the stimulatory effect of the added 15NO3-N on phytoplankton growth. Thus, NRA may be a more reliable indicator of the rate of NO3- uptake in oligotrophic waters. In nitrate-replete and light-deficient waters, NU did not correlate well with NRA. The average NU/NRA was 0.7 +/- 0.7. These low and variable values of NU/NRA suggest a possible decoupling between NRA and NU. By using the relationship between NU and NRA in nitrate- and light-replete waters and the depth-integrated inventory of NRA in the photic zone at each station, NU in oligotrophic waters, the coastal plume, upwelling waters and shelf waters can be estimated to be 0.45, 1.55, 3.12, and 3.59 mg-N m-2 h-1 respectively. These values fall well within the range of previously reported values in similar types of water

Nutrient supply in the Southern East China Sea after Typhoon Morakot

Author Posting. © Sears Foundation for Marine Research, 2013. This article is posted here by permission of Sears Foundation for Marine Research for personal use, not for redistribution. The definitive version was published in Journal of Marine Research 71 (2013): 133-149, doi:10.1357/002224013807343425.Recent studies show that typhoons have profound effects on phytoplankton assemblages along their tracks, but it is difficult to quantitatively estimate nutrient supply after a typhoon's passage due to a lack of nutrient information before and after the arrival of a typhoon. During the passage of Typhoon Morakot (July 22 to Aug. 26, 2009), we conducted pre- and post-typhoon field cruises to study nutrient supply in the Southern East China Sea (SECS). The results showed nitrate and phosphate supplies to the water column in the SECS after the typhoon's passage were 5.6 × 1011 g-N/day and 7.8 × 1010 g-P/day which were significantly higher than those before the typhoon occurred (nitrate supply = 1 × 109 g-N/day, phosphate supply = 1.6 × 108 g-P/day). We conclude from this data, and after consulting the available physical data, that the highest nitrate concentration was caused by strong upwelling and/or vertical mixing, and input of nutrient-replete terrestrial waters. The nitrate and phosphate input related to the passage of Typhoon Morakot can account for approximately 86% and 87% of summer nitrate and phosphate supplies to the southern East China Sea.This research was supported by the Top University Program and the National Science Council (NSC101-2116M-110- 001, NSC101-2611-M-110-015-MY3, NSC100-2119-M-110-003, NSC98-2611-M-019-014-MY3, NSC NSC98-2611-M-002-019-MY3) of Taiwan to C.-C. Hung, G.-C.Gong and S. Jan

Corrigendum to “Nutrient supply in the Southern East China Sea after Typhoon Morakot”

Author Posting. © Sears Foundation for Marine Research, 2013. This article is posted here by permission of Sears Foundation for Marine Research for personal use, not for redistribution. The definitive version was published in Journal of Marine Research 71 (2013): 451-452, doi:10.1357/002224013812587609

2008 Inter-laboratory Comparison Study of a Reference Material for Nutrients in Seawater

Autoclaved natural seawater collected in the North Pacific Ocean was used as a reference material for nutrients in seawater (RMNS) during an inter-laboratory comparison (I/C) study conducted in 2008. This study was a follow-up to previous studies conducted in 2003 and 2006. A set of six samples was distributed to each of 58 laboratories in 15 countries around the globe, and results were returned by 54 of those laboratories (15 countries). The homogeneities of samples used in the 2008 I/C study, based on analyses for three determinants, were improved compared to those of samples used in the 2003 and 2006 I/C studies. Results of these I/C studies indicate that most of the participating laboratories have an analytical technique for nutrients that is sufficient to provide data of high comparability. The differences between reported concentrations from the same laboratories in the 2006 and 2008 I/C studies for the same batch of RMNS indicate that most of the laboratories have been maintaining internal comparability for two years. Thus, with the current high level of performance in the participating laboratories, the use of a common reference material and the adaptation of an internationally accepted nutrient scale system would increase comparability among laboratories worldwide, and the use of a certified reference material would establish traceability. In the 2008 I/C study we observed a problem of non-linearity of the instruments of the participating laboratories similar to that observed among the laboratories in the 2006 I/C study. This problem of non-linearity should be investigated and discussed to improve comparability for the full range of nutrient concentrations. For silicate comparability in particular, we see relatively larger consensus standard deviations than those for nitrate and phosphate