Two Meson Systems with Ginsparg-Wilson Valence Quarks

Unphysical effects associated with finite lattice spacing and partial quenching may lead to the presence of unphysical terms in chiral extrapolation formulae. These unphysical terms must then be removed during data analysis before physical predictions can be made. In this work, we show that through next-to-leading order, there are no unphysical counterterms in the extrapolation formulae, expressed in lattice-physical parameters, for meson scattering lengths in theories with Ginsparg-Wilson valence quarks. Our work applies to most sea quark discretization, provided that chiral perturbation theory is a valid approximation. We demonstrate our results with explicit computations and show that, in favorable circumstances, the extrapolation formulae do not depend on the unknown constant C_Mix appearing at lowest order in the mixed action chiral Lagrangian. We show that the I=1 KK scattering length does not depend on C_Mix in contrast to the I=3/2 K-pi scattering length. In addition, we show that these observables combined with f_K / f_pi and the I=2 pi-pi scattering length share only two linearly independent sets of counterterms, providing a means to test the mixed action theory at one lattice spacing. We therefore make a prediction for the I=1 KK scattering length.Comment: 21 pages, 2 figures, 2 tables. Version to be published in PRD. Improved discussion in Sec. III B. Added reference

Thirty Meter Telescope Site Testing I: Overview

As part of the conceptual and preliminary design processes of the Thirty Meter Telescope (TMT), the TMT site testing team has spent the last five years measuring the atmospheric properties of five candidate mountains in North and South America with an unprecedented array of instrumentation. The site testing period was preceded by several years of analyses selecting the five candidates, Cerros Tolar, Armazones and Tolonchar in northern Chile; San Pedro Martir in Baja California, Mexico and the 13 North (13N) site on Mauna Kea, Hawaii. Site testing was concluded by the selection of two remaining sites for further consideration, Armazones and Mauna Kea 13N. It showed that all five candidates are excellent sites for an extremely large astronomical observatory and that none of the sites stands out as the obvious and only logical choice based on its combined properties. This is the first article in a series discussing the TMT site testing project.Comment: Accepted for publication in PASP, April 2009 issu

A Drosophila melanogaster model of spinal muscular atrophy reveals a function for SMN in striated muscle

Mutations in human survival motor neurons 1 (SMN1) cause spinal muscular atrophy (SMA) and are associated with defects in assembly of small nuclear ribonucleoproteins (snRNPs) in vitro. However, the etiological link between snRNPs and SMA is unclear. We have developed a Drosophila melanogaster system to model SMA in vivo. Larval-lethal Smn-null mutations show no detectable snRNP reduction, making it unlikely that these animals die from global snRNP deprivation. Hypomorphic mutations in Smn reduce dSMN protein levels in the adult thorax, causing flightlessness and acute muscular atrophy. Mutant flight muscle motoneurons display pronounced axon routing and arborization defects. Moreover, Smn mutant myofibers fail to form thin filaments and phenocopy null mutations in Act88F, which is the flight muscle–specific actin isoform. In wild-type muscles, dSMN colocalizes with sarcomeric actin and forms a complex with α-actinin, the thin filament crosslinker. The sarcomeric localization of Smn is conserved in mouse myofibrils. These observations suggest a muscle-specific function for SMN and underline the importance of this tissue in modulating SMA severity

Regulated Formation of an Amyloid-like Translational Repressor Governs Gametogenesis

Message-specific translational control is required for gametogenesis. In yeast, the RNA-binding protein Rim4 mediates translational repression of numerous mRNAs, including the B-type cyclin CLB3, which is essential for establishing the meiotic chromosome segregation pattern. Here, we show that Rim4 forms amyloid-like aggregates and that it is the amyloid-like form of Rim4 that is the active, translationally repressive form of the protein. Our data further show that Rim4 aggregation is a developmentally regulated process. Starvation induces the conversion of monomeric Rim4 into amyloid-like aggregates, thereby activating the protein to bring about repression of translation. At the onset of meiosis II, Rim4 aggregates are abruptly degraded allowing translation to commence. Although amyloids are best known for their role in the etiology of diseases such as Alzheimer’s, Parkinson’s, and diabetes by forming toxic protein aggregates, our findings show that cells can utilize amyloid-like protein aggregates to function as central regulators of gametogenesis.Charles A. King Trust (Postdoctoral Fellowship)American Cancer Society (Fellowship)National Institutes of Health (U.S.) (Grants GM62207, GM77537, and GM094303

Maintaining Life-saving Testing for Patients With Infectious Diseases: Infectious Diseases Society of America, American Society for Microbiology, and Pan American Society for Clinical Virology Recommendations on the Regulation of Laboratory-developed Tests

In 2014, the US Food and Drug Administration (FDA) proposed to regulate laboratory-developed tests (LDTs)-diagnostics designed, manufactured, and used within a single laboratory. The Infectious Diseases Society of America, the American Society for Microbiology, and the Pan American Society for Clinical Virology recognize that the FDA is committed to protecting patients. However, our societies are concerned that the proposed regulations will limit access to testing and negatively impact infectious diseases (ID) LDTs. In this joint commentary, our societies discuss why LDTs are critical for ID patient care, hospital infection control, and public health responses. We also highlight how the FDA's proposed regulation of LDTs could impair patient access to life-saving tests and stifle innovation in ID diagnostics. Finally, our societies make specific recommendations for the FDA's consideration to reduce the burden of the proposed new rules on clinical laboratories and protect patients' access to state-of-the art, quality LDTs

Identification of hip fracture patients from radiographs using Fourier analysis of the trabecular structure: a cross-sectional study

Peer reviewedPublisher PD

Drought Prediction for Socio-Cultural Stability Project

The primary objective of this project is to answer the question: "Can existing, linked infrastructures be used to predict the onset of drought months in advance?" Based on our work, the answer to this question is "yes" with the qualifiers that skill depends on both lead-time and location, and especially with the associated teleconnections (e.g., ENSO, Indian Ocean Dipole) active in a given region season. As part of this work, we successfully developed a prototype drought early warning system based on existing/mature NASA Earth science components including the Goddard Earth Observing System Data Assimilation System Version 5 (GEOS-5) forecasting model, the Land Information System (LIS) land data assimilation software framework, the Catchment Land Surface Model (CLSM), remotely sensed terrestrial water storage from the Gravity Recovery and Climate Experiment (GRACE) and remotely sensed soil moisture products from the Aqua/Advanced Microwave Scanning Radiometer - EOS (AMSR-E). We focused on a single drought year - 2011 - during which major agricultural droughts occurred with devastating impacts in the Texas-Mexico region of North America (TEXMEX) and the Horn of Africa (HOA). Our results demonstrate that GEOS-5 precipitation forecasts show skill globally at 1-month lead, and can show up to 3 months skill regionally in the TEXMEX and HOA areas. Our results also demonstrate that the CLSM soil moisture percentiles are a goof indicator of drought, as compared to the North American Drought Monitor of TEXMEX and a combination of Famine Early Warning Systems Network (FEWS NET) data and Moderate Resolution Imaging Spectrometer (MODIS)'s Normalizing Difference Vegetation Index (NDVI) anomalies over HOA. The data assimilation experiments produced mixed results. GRACE terrestrial water storage (TWS) assimilation was found to significantly improve soil moisture and evapotransportation, as well as drought monitoring via soil moisture percentiles, while AMSR-E soil moisture assimilation produced marginal benefits. We carried out 1-3 month lead-time forecast experiments using GEOS-5 forecasts as input to LIS/CLSM. Based on these forecast experiments, we find that the expected skill in GEOS-5 forecasts from 1-3 months is present in the soil moisture percentiles used to indicate drought. In the case of the HOA drought, the failure of the long rains in April appears in the February 1, March 1 and April 1 initialized forecasts, suggesting that for this case, drought forecasting would have provided some advance warning about the drought conditions observed in 2011. Three key recommendations for follow-up work include: (1) carry out a comprehensive analysis of droughts observed over the entire period of record for GEOS-5 forecasts; (2) continue to analyze the GEOS-5 forecasts in HOA stratifying by anomalies in long and short rains; and (3) continue to include GRACE TWS, Soil Moisture/Ocean Salinity (SMOS) and the upcoming NASA Soil Moisture Active/Passive (SMAP) soil moisture products in a routine activity building on this prototype to further quantify the benefits for drought assessment and prediction

Multi Aperture Scintillation Sensor (MASS) used in the site selection of the Thirty Meter Telescope (TMT)

One of the main tools used in the TMT site testing campaign is the turbulence profiler MASS. We describe empirical investigations and a side by side comparison of two MASS systems which were performed in order to identify the accuracy of MASS turbulence data and its dependence on the instrument calibration. The accuracy of the total seeing delivered by the TMT MASS systems is found to be better than 0"05. The combination of MASS and DIMM allows to observe the seeing within the first few hundred meters of the atmosphere and can be used to investigate possible correlations with meteorological parameters measured close to the ground. We also compare the detection of clouds and cirrus by means of MASS data (LOSSAM method) with measurements of the thermal emission of clouds using a net radiation sensor. These methods are compared with the visual cloud detection using all sky cameras

The Antarctic Submillimeter Telescope and Remote Observatory (AST/RO)

AST/RO, a 1.7 m diameter telescope for astronomy and aeronomy studies at wavelengths between 200 and 2000 microns, was installed at the South Pole during the 1994-1995 Austral summer. The telescope operates continuously through the Austral winter, and is being used primarily for spectroscopic studies of neutral atomic carbon and carbon monoxide in the interstellar medium of the Milky Way and the Magellanic Clouds. The South Pole environment is unique among observatory sites for unusually low wind speeds, low absolute humidity, and the consistent clarity of the submillimeter sky. Four heterodyne receivers, an array receiver, three acousto-optical spectrometers, and an array spectrometer are installed. A Fabry-Perot spectrometer using a bolometric array and a Terahertz receiver are in development. Telescope pointing, focus, and calibration methods as well as the unique working environment and logistical requirements of the South Pole are described.Comment: 57 pages, 15 figures. Submitted to PAS