Measuring salivary cortisol in the behavioral neuroscience laboratory

As instructors who teach laboratory courses in biological psychology/behavioral neuroscience, we have often been at a loss to find appropriate experiments where students are able to play both the role of experimenter and subject. The difficulty arises because there are few biological parameters representing CNS activity that can ethically be examined in human participants. As a result, the go-to experiments that allow students to act as both experimenter and subject tend to be electrophysiological in nature (e.g., EEG, GSR, etc.). It was our desire to create a laboratory module that would allow students to collect and analyze a biochemical measure of human neural activity. We report here the development of an experiment module that utilizes an easily obtainable enzyme immunoassay (EIA) kit (nearly identical to the ELISA) to measure human salivary cortisol. Cortisol is a hormone of the adrenal cortex that can be used as a peripheral indicator of hypothalamic neural activity. Plasma (and salivary) cortisol levels rise due to circadian influences as well as perturbations in the organism’s environment (i.e., stressors) that make it possible to detect rather robust experimental effects. Also, there has been much debate on the role of cortisol and hypothalamic-pituitary-adrenal axis dysregulation in the pathophysiology of depression making for a clinically relevant extension to the lecture portion dealing with the “stress axis” (hypothalamic-pituitary-adrenal or HPA axis). Collection of salivary cortisol is simple, painless, and non-invasive and can be performed at any time the subject desires. Sample storage is convenient as the samples can be kept in a home freezer. Repeated freeze-thaws do not adversely affect the determination of cortisol levels, so the students can just bring them in on the day of the assay without need of in-transport refrigeration or instructor/student coordination. The assay can be performed successfully by anyone with access to a plate reader and a few commonly-used laboratory items. A single plate assay can be completed in two hours (two to three hours by an inexperienced group of students under supervision). With the available cortisol kit, our students have examined both circadian effects and stressor/relaxation effects on salivary cortisol levels in a laboratory class setting. The module has been employed twice and we intend to include it in each semester that the course is taught. One further impact of the module is that studen

Introduction: Toward an Engaged Feminist Heritage Praxis

We advocate a feminist approach to archaeological heritage work in order to transform heritage practice and the production of archaeological knowledge. We use an engaged feminist standpoint and situate intersubjectivity and intersectionality as critical components of this practice. An engaged feminist approach to heritage work allows the discipline to consider women’s, men’s, and gender non-conforming persons’ positions in the field, to reveal their contributions, to develop critical pedagogical approaches, and to rethink forms of representation. Throughout, we emphasize the intellectual labor of women of color, queer and gender non-conforming persons, and early white feminists in archaeology

The structural biology of type IV secretion systems

Type IV secretion systems (T4SSs) are versatile secretion systems that are found in both Gram-negative and Gram-positive bacteria and secrete a wide range of substrates, from single proteins to protein–protein and protein–DNA complexes. They usually consist of 12 components that are organized into ATP-powered, double-membrane-spanning complexes. The structures of single soluble components or domains have been solved, but an understanding of how these structures come together has only recently begun to emerge. This Review focuses on the structural advances that have been made over the past 10 years and how the corresponding structural insights have helped to elucidate many of the details of the mechanism of type IV secretion

Structure- and context-based analysis of the GxGYxYP family reveals a new putative class of Glycoside Hydrolase

BACKGROUND: Gut microbiome metagenomics has revealed many protein families and domains found largely or exclusively in that environment. Proteins containing the GxGYxYP domain are over-represented in the gut microbiota, and are found in Polysaccharide Utilization Loci in the gut symbiont Bacteroides thetaiotaomicron, suggesting their involvement in polysaccharide metabolism, but little else is known of the function of this domain. RESULTS: Genomic context and domain architecture analyses support a role for the GxGYxYP domain in carbohydrate metabolism. Sparse occurrences in eukaryotes are the result of lateral gene transfer. The structure of the GxGYxYP domain-containing protein encoded by the BT2193 locus reveals two structural domains, the first composed of three divergent repeats with no recognisable homology to previously solved structures, the second a more familiar seven-stranded β/α barrel. Structure-based analyses including conservation mapping localise a presumed functional site to a cleft between the two domains of BT2193. Matching to a catalytic site template from a GH9 cellulase and other analyses point to a putative catalytic triad composed of Glu272, Asp331 and Asp333. CONCLUSIONS: We suggest that GxGYxYP-containing proteins constitute a novel glycoside hydrolase family of as yet unknown specificity

Measurement of the charge asymmetry in top quark pair production in pp collisions at √s = 7 using the ATLAS detector

A measurement of the top-antitop production charge asymmetry A is presented using data corresponding to an integrated luminosity of 1.04 fb −1 of pp collisions at TeV collected by the ATLAS detector at the LHC. Events are selected with a single lepton (electron or muon), missing transverse momentum and at least four jets of which at least one jet is identified as coming from a b -quark. A kinematic fit is used to reconstruct the event topology. After background subtraction, a Bayesian unfolding procedure is performed to correct for acceptance and detector effects. The measured value of A is , consistent with the prediction from the Monte Carlo generator of A =0.006±0.002. Measurements of A in two ranges of invariant mass of the top-antitop pair are also shown