Enrollado de la hoja de la vid o leaf roll Varios

El enrollado de la hoja de la vid (conocido generalmente como Leafroll) es una enfermedad de naturaleza viral conocida desde el siglo XIX. Se ha reportado en casi todas las regiones vitícolas del mundo y es una de las de mayor impacto económico. Recién a fines de la década de 1970 se identificaron consistentemente partículas virales con esta enfermedad, y hasta el momento no se han podido completar los postulados de Koch, de modo que un conjunto de especies virales permanecen como asociadas a esta enfermedad, sin haber poder concluido ser los agentes causantes. Cinco especies virales de la familia Closteroviridae están asociadas a esta enfermedad: Grapevine Leafroll associated Virus (GLRaV) 1, -3, -4 (Género Ampelovirus); GLRaV-2 (Closterovirus); y GLRaV-7 (Velarivirus). La enfermedad fue descrita en Argentina en el año 1968 (Nadal 1968), pero no fue hasta la década del 2000 que se identificaron los virus asociados. Los virus causantes de esta enfermedad reportados en Argentina (GLRaV-1,-2,-3 y -4) están considerados en el esquema de certificación sanitaria de la vid vigente, normado por la Resolución 199/18 del INASE, debiendo el material certificado estar libre de estos virus.EEA MendozaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; Argentin

Incidence of Grapevine Leafroll Associated Viruses -1, -2, and -3 in Mendoza vineyards

Viticulture is important in Argentina's economy, especially in the province of Mendoza, which is responsible for more than 75% of the crop cultivated area. In this work, we evaluated the incidence of Grapevine leafroll-associated viruses (GLRaV) -1, -2, and -3 in Vitis vinifera clones of cultivars Cabernet Sauvignon, Cabernet Franc, and Sauvignon Blanc, planted in different zones of Mendoza. The selected clones were previously reported as putatively infected by GLRaV-2. All selected samples were analyzed by DAS-ELISA for GLRaV-1,-2 and -3. GLRaV-2 was the only virus identified in all the analyzed clones. The overall infection rates were 0.6%, 18.8% and 1.2 % for GLRaV-1, 2 and 3 respectively. For the clone Cabernet Sauvignon 337, the infection rate was very high (68.3%).A viticultura é importante para a economia da Argentina, especialmente na província de Mendoza, que abrange mais de 75% da área cultivada do país. Neste trabalho, nós avaliamos a incidência de Grapevine leafroll associated virus (GLRaV) -1, -2 e -3 em clones de Vitis vinifera das cultivares Cabernet Sauvignon, Cabernet Franc e Sauvignon Blanc, cultivadas em diferentes zonas de Mendoza. Os clones selecionados foram previamente relatados como provavelmente infectados por GLRaV-2. Todas as amostras selecionadas foram analisadas por DAS-ELISA para GLRaV-1, -2 e -3. GLRaV-2 foi o único vírus identificado em todos os clones analisados. As incidëncias das infecçoes globais foram 0,6%, 18,8% e 1,2% para GLRaV-1, 2 e 3, respectivamente. No Cabernet Sauvignon clone 337 a incidëncia da infecção foi muito elevado (68,3%)Fil: Lanza Volpe, Melisa. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Engel, Esteban A. Fundación Ciencia para la Vida; Chile. Universidad Andrés Bello. Facultad de Ciencias de la Salud; ChileFil: Gracia, Olga. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; Argentin

Survey for major grapevine viruses in commercial vineyards of Northwestern Argentina

This study aimed to survey the occurrence of eight grapevine viruses in commercial vine yards located in the Calchaquíes Valleys in the northwest region of Argentina. A total of 103 samples of mature canes of vines showing either none or some viral-like symptoms were randomly collected. The samples were tested by RT-PCR/PCR-based assays for the screening of the following viruses: Grapevine fanleaf virus (GFLV), Grapevine leafroll-associated viruses (GLRaV-1, -2, -3, -4), Grapevine virus A (GVA), Grapevine rupestris stem pitting-associated viruses (GRSPaV), and Grapevine red blotch virus (GRBV). Sixty percent of the analyzed samples showed infection with some of the analyzed viruses, except GRBV. GLRaV-3 and GFLV were the most frequent viruses, present in 34% and 21% of the pos itive samples, respectively. This study represents the first survey report of the presence of grapevine viruses in the region of the Calchaquíes Valleys and contributes to the knowledge to maintain the sanitary status of commercial vineyards in Argentina.EEA SaltaFil: Rivadeneria, Monica. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Salta; ArgentinaFil: Galvan, Marta Zulema. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Aban, Marina. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Salta; ArgentinaFil: Aban, Marina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Semke, Rosa Elena. Centro de Desarrollo Vitícola del Valle Calchaquí; ArgentinaFil: Rivadeneria, Josefina. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Salta; ArgentinaFil: Rivadeneira, Josefina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Lanza Volpe, Melisa. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; Argentin

Genetic and Transcription Profile Analysis of Tissue-Specific Anthocyanin Pigmentation in Carrot Root Phloem

In purple carrots, anthocyanin pigmentation can be expressed in the entire root, or it can display tissue specific-patterns. Within the phloem, purple pigmentation can be found in the outer phloem (OP) (also called the cortex) and inner phloem (IP), or it can be confined exclusively to the OP. In this work, the genetic control underlying tissue-specific anthocyanin pigmentation in the carrot root OP and IP tissues was investigated by means of linkage mapping and transcriptome (RNA-seq) and phylogenetic analyses; followed by gene expression (RT-qPCR) evaluations in two genetic backgrounds, an F2 population (3242) and the inbred B7262. Genetic mapping of ‘root outer phloem anthocyanin pigmentation’ (ROPAP) and inner phloem pigmentation (RIPAP) revealed colocalization of ROPAP with the P1 and P3 genomic regions previously known to condition pigmentation in different genetic stocks, whereas RIPAP co-localized with P3 only. Transcriptome analysis of purple OP (POP) vs. non-purple IP (NPIP) tissues, along with linkage and phylogenetic data, allowed an initial identification of 28 candidate genes, 19 of which were further evaluated by RT-qPCR in independent root samples of 3242 and B7262, revealing 15 genes consistently upregulated in the POP in both genetic backgrounds, and two genes upregulated in the POP in specific backgrounds. These include seven transcription factors, seven anthocyanin structural genes, and two genes involved in cellular transport. Altogether, our results point at DcMYB7, DcMYB113, and a MADS-box (DCAR_010757) as the main candidate genes conditioning ROPAP in 3242, whereas DcMYB7 and MADS-box condition RIPAP in this background. In 7262, DcMYB113 conditions ROPAP.EEA MendozaFil: Bannoud, Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Carvajal, Sofía. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Ellison, Shelby. University of Wisconsin. Department of Horticulture; Estados Unidos.Fil: Senalik, Douglas A. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados UnidosFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Iorizzo, Massimo. North Carolina State University. Plants for Human Health Institute; Estados UnidosFil: Iorizzo, Massimo. North Carolina State University. Department of Horticultural Science; Estados UnidosFil: Simon, Philipp. University of Wisconsin. Department of Horticulture; Estados Unidos.Fil: Simon, Philipp. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados UnidosFil: Cavagnaro, Pablo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria La Consulta; ArgentinaFil: Cavagnaro, Pablo. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Cavagnaro, Pablo. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Horticultura; Argentina

Whole genome resequencing and custom genotyping unveil clonal lineages in ‘Malbec’ grapevines (Vitis vinifera L.)

Grapevine cultivars are clonally propagated to preserve their varietal attributes. However, genetic variations accumulate due to the occurrence of somatic mutations. This process is anthropically influenced through plant transportation, clonal propagation and selection. Malbec is a cultivar that is well-appreciated for the elaboration of red wine. It originated in Southwestern France and was introduced in Argentina during the 1850s. In order to study the clonal genetic diversity of Malbec grapevines, we generated whole-genome resequencing data for four accessions with different clonal propagation records. A stringent variant calling procedure was established to identify reliable polymorphisms among the analyzed accessions. The latter procedure retrieved 941 single nucleotide variants (SNVs). A reduced set of the detected SNVs was corroborated through Sanger sequencing, and employed to custom-design a genotyping experiment. We successfully genotyped 214 Malbec accessions using 41 SNVs, and identified 14 genotypes that clustered in two genetically divergent clonal lineages. These lineages were associated with the time span of clonal propagation of the analyzed accessions in Argentina and Europe. Our results show the usefulness of this approach for the study of the scarce intra-cultivar genetic diversity in grapevines. We also provide evidence on how human actions might have driven the accumulation of different somatic mutations, ultimately shaping the Malbec genetic diversity pattern.EEA MendozaFil: Calderón, Luciano. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza; ArgentinaFil: Calderón, Luciano. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; ArgentinaFil: Mauri, Nuria. Instituto de Ciencias de la Vid y del Vino (CSIC, UR, Gobierno de La Rioja). Finca La Grajera; ArgentinaFil: Muñoz, Claudio. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias; ArgentinaFil: Carbonell Bejerano, Pablo. Max Planck Institute for Developmental Biology; AlemaniaFil: Bree, Laura. Vivero Mercier; ArgentinaFil: Bergamin, Daniel. Vivero Mercier; ArgentinaFil: Sola, Cristóbal. Vivero Mercier; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA), Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Royo, Carolina. Instituto de Ciencias de la Vid y del Vino (CSIC, UR, Gobierno de La Rioja). Finca La Grajera; ArgentinaFil: Ibáñez, Javier. Instituto de Ciencias de la Vid y del Vino (CSIC, UR, Gobierno de La Rioja). Finca La Grajera; ArgentinaFil: Martínez Zapater, José Miguel. Instituto de Ciencias de la Vid y del Vino (CSIC, UR, Gobierno de La Rioja). Finca La Grajera; ArgentinaFil: Lijavetzky, Diego. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza; ArgentinaFil: Lijavetzky, Diego. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentin

A completely-phased diploid genome assembly for ‘Malbec’ cultivar (Vitis vinifera L.)

Poster. Publicado en: BAG Journal of Basic and Applied Genetics, 32 (1 suppl), 2021Most grapevine cultivars originated from the outcrossing of two genetically diverse parents, and are clonally propagated to preserve phenotypes of productive interest. Hence, cultivars are first filial generations (F1) with highly heterozygous diploid genomes, that turn challenging to assemble. ‘Malbec’ is the main cultivar for the Argentine wine industry and it originated in France, from the outcrossing of ‘Magdeleine Noir des Charentes’ and ‘Prunelard’ cultivars. Based on that mother-father-offspring relationship, here we followed the algorithm implemented in the software CanuTrio to produce a phased assembly of ‘Malbec’ genome. For this aim, parental cultivars’ Illumina short-reads were used to sort ‘Malbec’ PacBio long-reads into its haploid complements, to be assembled separately. Postassembly, bioinformatic procedures were employed to reduce the number of duplicated regions and perform sequence error corrections (using ‘Malbec’ Illumina short-reads). We obtained two highly complete and contiguous haploid assemblies for ‘Malbec’, Haplotype-Prunelard (482.4 Mb size; contig N50=7.7 Mb) and Haplotype-Magdeleine (479.4 Mb size; contig N50=6.6 Mb), with 96.1 and 95.8% of BUSCO genes, respectively. We tested for the composition of both haplophases with the tool Merqury, and observed 15% of both assemblies affected by structural variations, along with 3.2 million SNPs and 0.6 million InDels. Our results indicate that this is a valid approach to assemble highly heterozygous and complex diploid genomes in a completely-phased way.EEA MendozaFil: Calderón, Luciano. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza; Argentina. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; ArgentinaFil: Carbonell-Bejerano, P. Max Planck Institute for Developmental Biology; AlemaniaFil: Mauri, Nuria. Instituto de Ciencias de la Vid y del Vino (CSIC, UR, Gobierno de La Rioja). Finca La Grajera; ArgentinaFil: Muñoz, C. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias; ArgentinaFil: Bree, Laura. Vivero Mercier; ArgentinaFil: Sola, Cristóbal. Vivero Mercier; ArgentinaFil: Bergamin, Daniel. Vivero Mercier; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Martínez Zapater, José Miguel. Instituto de Ciencias de la Vid y del Vino (CSIC, UR, Gobierno de La Rioja). Finca La Grajera; ArgentinaFil: Weigel, D. Max Planck Institute for Developmental Biology; AlemaniaFil: Lijavetzky, Diego. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza; Argentina. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentin

Vid : Fitoplasmas

EEA Alto ValleFil: Gomez Talquenca, Gonzalo Sebastián. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Conci, Luis Rogelio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentin

Genetic characterization of grapevine-infecting Botrytis cinerea isolates from Argentina = Caracterización genética de aislamientos de Botrytis cinerea obtenidos en vides de Argentina

Background: Botrytis cinerea is an ascomycete with a high genetic diversity and complex population structure, as reported from several hosts and sites. However, nothing is known about its genetic diversity in Argentina. Aims: The aim of this work is to estimate the genetic diversity of a local population of B. cinerea isolates obtained from grapevine in Argentina. Methods: In this work, 35 strains that had been isolated from grapevines were genotyped for the presence of transposable elements and PCR-based RFLP molecular markers. The obtained results were compared with those from a large French population of the fungus, and used to perform a population genetics analysis using the Genepop software. Results: All the analysed isolates were classified as Group II (according to the most recent proposed classification) and showed a high degree of genetic diversity, with 14 different haplotypes. A significant difference in allele frequency was recorded between the local and French populations. Conclusions: These comparisons between fungal populations, led to the detection of a high level of diversity and the differentiation between local and French groups of isolates. This was confirmed by an Fst value of 0.3332, which was higher than that reported for other pairwise comparisons of populations. This work constitutes the first report on the genetic diversity of B. cinerea isolates and their population structure in Argentina.Antecedentes: Botrytis cinerea es un ascomiceto con una gran diversidad genética y una compleja estructura poblacional cuya presencia ha sido descrita en diversos lugares y huéspedes distintos, pero nada se sabe acerca de su diversidad genética en Argentina. Objetivos: El objetivo de este trabajo fue estimar la diversidad genética de una población local de aislamientos de B. cinerea obtenidos de vid en Argentina. Métodos: En este trabajo, 35 cepas aisladas de vides fueron genotipadas mediante marcadores moleculares basados en PCR-RFLP y según la presencia de elementos transposables. Estos resultados fueron comparados con los de una gran población francesa del hongo, y utilizados para realizar un análisis de genética poblacional utilizando el software Genepop. Resultados: Todos los aislamientos analizados fueron clasificados como grupo II (de acuerdo a la clasificación más recientemente propuesta) y mostraron un alto grado de diversidad genética, con 14 haplotipos distintos en el número de muestras involucradas. Se observó una notable diferencia en la frecuencia alélica entre ambas poblaciones. Conclusiones: Estas diferencias entre las poblaciones comparadas condujeron a la detección de un alto nivel de diversidad y diferenciación poblacional entre los aislamientos locales y los franceses. Esto fue confirmado por un valor Fst de 0,3332, superior al previamente reportado para otras comparaciones de este tipo. Este trabajo es el primero en documentar la diversidad genética de aislamientos de B. cinerea y su estructura poblacional en Argentina.EEA MendozaFil: Muñoz, Claudio Javier. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Oriolani, Enrique. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaFil: Combina, Mariana. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; Argentin

Partial molecular and biological characterization of grapevine leafroll-associated virus 2 isolates from Argentina

Grapevine leafroll is one of the most important viral disease affecting grapevines the world over. One of the viruses associated with this disease is Grapevine leafroll associated virus 2 (GLRaV-2), which has two remarkable properties: high genetic variability (up to date at least 6 different lineages have been reported) and the unique ability among leafroll-associated viral species to be transmitted by sap inoculation to herbaceous hosts, specifically to Nicotiana spp. The presence of this virus in Mendoza (Argentina), has previously been reported but no information is available relative to the genetic variability of GLRaV-2 isolates of and their biological behavior. The molecular characterization of the CP-p19-p24 genes of the local isolates disclosed that they belong to four of the six described GLRaV-2 lineages. Using at least one isolate of each lineage, mechanical transmission to herbaceous host of the Nicotiana genus were made. Results showed a differential behavior in some combinations isolate/Nicotiana spp. and an incompatible interaction between GLRaV-2 and two new experimental hosts, N. rustica and N. tabacum cv. Samsun and White Burley.Fil: Lanza Volpe, Melisa. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza. Laboratorio de Fitovirología; ArgentinaFil: Moyano, Sabrina Noé. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza. Laboratorio de Fitovirología; ArgentinaFil: Lijavetzky, Diego. Instituto de Biología Agrícola Mendoza-Consejo Nacional de Investigaciones Científicas y Técnicas. Grupo de Genética y Genómica de Vid; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza. Laboratorio de Fitovirología; Argentin

In vitro plants of Vitis vinifera respond to infection with the fungus Phaeoacremonium parasiticum by synthesizing the phytoalexin nerolidol

This study investigated terpene biosynthesis in basal and apical tissues of in vitro-grown plants of Vitis vinifera cv. Chardonnay infected or not (control) with Phaeoacremonium parasiticum. This pathogen is one of the prevalent agents involved in the grapevine “hoja de malvón” disease. The main terpene identified by gas chromatography electron impact mass spectrometry (GC-EIMS) was nerolidol, which was found in apical and basal tissues at a concentration of ca. 0.12 μg mg FW−1. Consistent with this, an increment in terpene synthase (TPS) activity, assessed as tritiated farnesyl pyrophosphate ([1−3H]-FPP) transformed into hexane-soluble radioactive products in infected plants, was observed. TPS activity increased in correlation with the fungal concentration. Nerolidol inhibited in vitro mycelium growth and reduced fungal growth, in a concentration dependent manner. According to our results, the response of grapevine tissues to Pm. parasiticum is systemic, as it can be visualized by an augment of transcript abundance of VvPNLinNer1. It is also characterized by an increase of de novo synthesis of TPS responsible for the biosynthesis of phytoalexin nerolidol.EEA MendozaFil: Escoriaza, Maria Georgina. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza. Laboratorio de Fitopatología y Fitovirología; ArgentinaFil: Garcia Lampasona, Sandra Claudia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza. Laboratorio de Fitopatología y Fitovirología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; ArgentinaFil: Gomez Talquenca, Gonzalo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza. Laboratorio de Fitopatología y Fitovirología; ArgentinaFil: Piccoli, Patricia Noemí. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentin