Deteriogenic flora of the Phlegraean Fields Archaeological Park: ecological analysis and management guidelines

Biodeterioration, the alteration caused by living organisms, on historical buildings and stone monuments is a well-known problem affecting two-thirds of the world’s cultural heritage. The study of the flora growing on wall surface is of particular importance for the assessment of the risk of biodeterioration of stone artifacts by vascular plants, and for maintenance planning. In this study, we investigate how rock type, exposure and inclination of the wall affect the biodeteriogenic flora at 13 sites of the Archaeological Park of the Phlegraean Fields located in the province of Naples, in southern Italy. For each site, we analysed randomly selected square areas with 2 × 2 m size, representing the different vegetation types in terms of vascular plant species cover. The total num - ber of plant species recorded was 129, belonging to 43 families. Erigeron sumatrensis, Sonchus tenerrimus and Parietaria judaica are the most commonly reported species, while Capparis orientalis is the species with the highest average coverage. Substrate type, exposure and surface inclination affect the floristic composition, with the average plant cover significantly higher on vertical surfaces and at western and southern expo - sure. All the main biodeteriogenic vascular plant species grow on more or less porous lythotype like yellow tufa, conglomerate and bricks. Finally, woody plants eradications methods are proposed by the tree cutting and local application of herbicides, to avoid stump and root sprouting and to minimize the dispersion of chemicals in the sur- rounding environment

Organic Amendments, Beneficial Microbes, and Soil Microbiota: Toward a Unified Framework for Disease Suppression

Organic amendments (OAs) and soilborne biocontrol agents or beneficial microbes (BMs) have been extensively studied and applied worldwide in most agriculturally important plant species. However, poor integration of research and technical approaches has limited the development of effective disease management practices based on the combination of these two bio-based strategies. Insights into the importance of the plant-associated microbiome for crop productivity, which can be modified or modulated by introducing OAs and/or BMs, are providing novel opportunities to achieve the goal of long-term disease control. This review discusses novel ways of functionally characterizing OAs and how they may be used to promote the effect of added biocontrol agents and/or beneficial soil microbiota to support natural suppressiveness of plant pathogens

Metabolomics and chemometrics of seven aromatic plants:carob, eucalyptus, laurel, mint, myrtle, rosemary and strawberry tree

Introduction: Arbutus unedo L. (strawberry tree), Ceratonia siliqua L. (carob), Eucalyptus camaldulensis Dehnh. (eucalyptus), Laurus nobilis L. (laurel), Mentha aquatica L. (water mint), Myrtus communis L. (common myrtle), and Rosmarinus officinalis L. (rosemary) are aromatic plants from the Mediterranean region whose parts and preparations are used for their nutritional properties and health benefits. Objectives: To evaluate and compare the metabolites profile, total phenol content (TPC), and antioxidant activity of plant leaves for their future use. Gas chromatography–mass spectrometry (GC–MS) was used for metabolomics. Data comparison was performed by chemometrics. Methodology: Polar and apolar extracts were analysed using untargeted GC–MS metabolomics followed by chemometrics (principal component analysis, heatmap correlation and dendrogram) to identify, quantify and compare the major organic compounds in the plants. Additionally, nuclear magnetic resonance (NMR) spectroscopy was used for the laurel polar extract to identify d-gluco-l-glycero-3-octulose whose presence was unclear from the GC–MS data. TPC and antioxidant assays were performed using classical methods (Folin–Ciocalteu, 2,2′-azinobis-(3-ethylbenzothiazoline-6-sulphonic acid) diammonium salt (ABTS), 2,2-diphenyl-1-picrylhydrazyl (DPPH)) and correlated to the phytochemical profiles. Results: Forty-three metabolites were identified including amino acids, organic acids, carbohydrates, phenols, polyols, fatty acids, and alkanes. Eight metabolites (d-fructose, d-glucose, d-mannose, gallic acid, quinic acid, myo-inositol, palmitic and stearic acids) were in common between all species. d-Gluco-l-glycero-3-octulose (37.29 ± 1.19%), d-pinitol (31.33 ± 5.12%), and arbutin (1.30 ± 0.44%,) were characteristic compounds of laurel, carob, and strawberry tree, respectively. Carob showed the highest values of TPC and antioxidant activity. Conclusion: GC–MS metabolomics and chemometrics analyses are fast and useful methods to determine and compare the metabolomics profiling of aromatic plants of food and industrial interest.</p

Linking organic matter chemistry with soil aggregate stability: Insight from 13C NMR spectroscopy

Soil aggregation is considered as a crucial process in agro-system sustainability due to the role in soil physical, chemical and biological dynamics. Here we tested the hypothesis that the initial chemical traits of organic matter (OM) may help to explain the variability of soil aggregation dynamics after organic amendment. We characterized ten OM types (alfalfa litter, biochar, cellulose, glucose, green compost, maize litter, manure compost, meat powder, sawdust, and solid digestate) by 13C-CPMAS NMR and elemental chemical features to investigate the effects of amendment quality on soil aggregation. In a manipulative factorial experiment, dry samples (200 g) of three soil types (S1, S2 and S3) with different texture, high pH (7\u20139), and similar OM content, were incorporated with 4 g (2% w/w) of dry, 2 mm-grounded OM, incubated in mesocosms for 300 days under controlled temperature (18 \ub1 2 \ub0C night and 24 \ub1 2 \ub0C day), and sampled at 4 dates for measuring aggregation index (AI), based on water stability of soil aggregates (WSA). We found that meat powder and alfalfa litter induced a rapid initial increase of AI, exceeding that of the controls by one to two orders of magnitude, likely acting as a C source for microbes. Biochar incorporation in soil barely affected AI, with intermediate effects with other OM types. Considering C bond types corresponding to OM 13C-CPMAS NMR spectral regions, carbonyl C was only correlated to early AI, possibly due to overlapping signals of amide structures; O-alkyl C and di-O-alkyl C (carbohydrate fraction) were positively associated to AI, indicating a promoting effect on soil structure, while aromatic C fractions showed an opposite pattern, possibly related to aggregate protection by coatings associated to water repellency, or to direct aggregate internal binding. This study demonstrates that OM chemical quality plays an important role in soil aggregation process, with the molecular composition defined by 13C-CPMAS NMR spectroscopy being more predictive of aggregation dynamics compared to classical elemental features. As such, this study provides a significant novel contribution to clarify the relationships between OM chemistry and soil aggregation

Spectroscopic and multivariate data-based method to assess the metabolomic fingerprint of Mediterranean plants

Introduction: Most secondary metabolites from plants have a prominent defensive role and repellency against predators and microbial pathogens. These properties largely vary among plant species and offer potential applications as biologically active compounds in medicine as well in agriculture. Objectives: We propose a new procedure that combine different spectroscopic techniques and multivariate data analysis to determine the chemical composition and the relative amounts of each metabolites and/or each class of organic compounds. The approach was used for a rapid identification of secondary metabolites from leaf and root of eight Mediterranean plants species. Methodology: The polar and the apolar extracts of two leaves and roots of each plant were analysed by proton nuclear magnetic resonance (1H-NMR) and gas chromatography coupled to mass spectrometry (GC–MS), respectively. Multivariate data analysis was used for a faster interpretation of data. Results: The metabolic fingerprint of the Mediterranean plants, Acanthus mollis, Dittrichia viscosa, Festuca drymeja, Fraxinus ornus, Fagus sylvatica, Hedera helix, Quercus ilex, and Typha latifolia, showed a complex chemical composition, being specific for each species and plant tissue. Two alditols, mannitol and quercitol, were found in manna ash (Fraxinus ornus) and holm oak (Q. ilex) polar leaf extracts, respectively. The highest levels of aromatic compounds were found in D. viscosa and T. latifolia. Fatty acids were the predominant class of compounds in all apolar extracts under investigation. Triterpene were almost exclusively found in roots, except for holm oak, where they constitute 58% of total extract. Steroids were widespread in leaf extracts. Conclusion: The major advantages of the proposed approach are versatility and rapidity, thus making it suitable for a fast comparison among species and plant tissue types.</p

Linking organic matter chemistry with soil aggregate stability: Insight from 13C NMR spectroscopy

Soil aggregation is considered as a crucial process in agro-system sustainability due to the role in soil physical, chemical and biological dynamics. Here we tested the hypothesis that the initial chemical traits of organic matter (OM) may help to explain the variability of soil aggregation dynamics after organic amendment. We characterized ten OM types (alfalfa litter, biochar, cellulose, glucose, green compost, maize litter, manure compost, meat powder, sawdust, and solid digestate) by 13C-CPMAS NMR and elemental chemical features to investigate the effects of amendment quality on soil aggregation. In a manipulative factorial experiment, dry samples (200 g) of three soil types (S1, S2 and S3) with different texture, high pH (7\u20139), and similar OM content, were incorporated with 4 g (2% w/w) of dry, 2 mm-grounded OM, incubated in mesocosms for 300 days under controlled temperature (18 \ub1 2 \ub0C night and 24 \ub1 2 \ub0C day), and sampled at 4 dates for measuring aggregation index (AI), based on water stability of soil aggregates (WSA). We found that meat powder and alfalfa litter induced a rapid initial increase of AI, exceeding that of the controls by one to two orders of magnitude, likely acting as a C source for microbes. Biochar incorporation in soil barely affected AI, with intermediate effects with other OM types. Considering C bond types corresponding to OM 13C-CPMAS NMR spectral regions, carbonyl C was only correlated to early AI, possibly due to overlapping signals of amide structures; O-alkyl C and di-O-alkyl C (carbohydrate fraction) were positively associated to AI, indicating a promoting effect on soil structure, while aromatic C fractions showed an opposite pattern, possibly related to aggregate protection by coatings associated to water repellency, or to direct aggregate internal binding. This study demonstrates that OM chemical quality plays an important role in soil aggregation process, with the molecular composition defined by 13C-CPMAS NMR spectroscopy being more predictive of aggregation dynamics compared to classical elemental features. As such, this study provides a significant novel contribution to clarify the relationships between OM chemistry and soil aggregation

Litter chemistry explains contrasting feeding preferences of bacteria, fungi, and higher plants

AbstractLitter decomposition provides a continuous flow of organic carbon and nutrients that affects plant development and the structure of decomposer communities. Aim of this study was to distinguish the feeding preferences of microbes and plants in relation to litter chemistry. We characterized 36 litter types by 13C-CPMAS NMR spectroscopy and tested these materials on 6 bacteria, 6 fungi, and 14 target plants. Undecomposed litter acted as a carbon source for most of the saprophytic microbes, although with a large variability across litter types, severely inhibiting root growth. An opposite response was found for aged litter that largely inhibited microbial growth, but had neutral or stimulatory effects on root proliferation. 13C-CPMAS NMR revealed that restricted resonance intervals within the alkyl C, methoxyl C, O-alkyl C and di-O-alkyl C spectral regions are crucial for understanding litter effects. Root growth, in contrast to microbes, was negatively affected by labile C sources but positively associated with signals related to plant tissue lignification. Our study showed that plant litter has specific and contrasting effects on bacteria, fungi and higher plants, highlighting that, in order to understand the effects of plant detritus on ecosystem structure and functionality, different microbial food web components should be simultaneously investigated.</jats:p

Cushion plant morphology controls biogenic capability\ua0and facilitation effects of Silene acaulis along\ua0an elevation gradient

The stress-gradient hypothesis (SGH) predicts that the balance of plant\u2013plant interactions shifts along abiotic environmental gradients, with facilitation becoming more frequent under stressful conditions. However, recent studies have challenged this perspective, reporting that positive interactions are, in some cases, more common at the intermediate level of environmental severity gradients. Here, we test whether and how neighbour effects by Silene acaulis cushions vary along a 700 m wide altitudinal transect, in relation to cushion morphological traits and environmental severity. Field measurements along the gradient, within and outside cushions, included (i) species richness and cover of coexisting vascular plants; (ii) cushion morphology; (iii) above- and below-ground microclimate; and (iv) soil quality. We used the relative interaction index to decouple neighbour trait effects and environmental severity effects on plant diversity at different elevations. The ability of the cushion plant to facilitate heterospecifics shifts considerably along the elevation gradient, being greatest at the intermediate level. On the other hand, Silene morphological traits steadily change along the gradient, from lax, soft and flat-shaped cushion habits at low elevation to tightly knit and dome-shaped habits at high elevation. Cushion morphological changes are associated with mitigating effects on microclimate, indicating that cushions effectively act as a heat-trap at medium and high elevations, while at low elevations the soft and flat cushions avoid excessive heat accumulation by tight coupling with the surrounding atmosphere. At the upper end of the gradient, cushion cespitose\u2013pulvinate compactness and high stem density appear to be critical traits in modulating the net effect of plant\u2013plant interaction, since the space available for hosting other vascular species is considerably reduced. In conclusion, this work provides a mechanistic link between plant morphological traits, associated biogenic microclimate changes and variation in net plant\u2013plant interactions along the explored severity gradient. Our findings support an alternative conceptual model to SGH, with plant facilitation collapsing at the upper extreme of the abiotic stress gradient

Climate, soil management, and cultivar affect Fusarium head blight incidence and deoxynivalenol accumulation in durum wheat of Southern Italy

Fusarium head blight (FHB) is a multifaceted disease caused by some species of Fusarium spp. A huge production of mycotoxins, mostly trichothecenes, often accompanied this disease. Amongst these toxic compounds, deoxynivalenol (DON) and its derivatives represent a major issue for human as well as for animal health and farming. Common and durum wheat are amongst the hosts of trichothecene-producing Fusaria. Differences in susceptibility to fungal infection and toxin accumulation occur in wheat cultivars. Recently, increasing incidence and severity of Fusarium infection and a higher DON accumulation in durum wheat were observed in Italy, especially in Northern regions. In this study, we analyzed wheat yield, technological parameters, the incidence of Fusarium infection and DON content in kernel samples of durum wheat coming from three locations of Southern Italy with different climatic conditions and grown during two seasons, with two methods of cultivation. Four different durum wheat cultivars prevalently cultivated in Southern Italian areas were chosen for this study. Our analysis showed the effects of environment and cultivar types on wheat productivity and key technological parameters for the quality level of the end-product, namely pasta. Notably, although a low rate of mycotoxin contamination in all study sites was assessed, an inverse relation emerged between fungal infection/DON production and durum wheat yield. Further, our study pinpoints the importance of environment conditions on several quality traits of durum wheat grown under Mediterranean climate. The environmental conditions at local level (microscale) and soil management practices may drive FHB outbreak and mycotoxin contamination even in growing area suitable for cropping this wheat species

Adult conspecific density affects Janzen-Connell patterns by modulating the recruitment exclusion zones

Plant-soil negative feedback (NF) is a well-established phenomenon that, by preventing the dominance of a single species, allows species coexistence and promotes the maintenance of biodiversity. At community scale, localized NF may cause the formation of exclusion zones under adult conspecifics leading to Janzen-Connell (JC) distribution. In this study, we explore the connection between adult density, either conspecifics or heterospecifics, on the probability of occurrence of JC distributions. Using an individual-based modelling approach, we simulated the formation of exclusion zones due to the build-up of NF in proximity of conspecific adult plants and assessed the frequency of JC distribution in relation to conspecifics and heterospecifics density ranging from isolated trees to closed forest stands. We found that JC recruitment distribution is very common in the case of an isolated tree when NF was strong and capable to form an exclusion zone under the parent tree. At very low NF intensity, a prevalence of the decreasing pattern was observed because, under such conditions, the inhibitory effect due to the presence of the mother tree was unable to overcome the clustering effect of the seed dispersal kernel. However, if NF is strong the JC frequency suddenly decreases in stands with a continuous conspecific cover likely as a result of progressive expansion of the exclusion zone surrounding all trees in closed forest stands. Finally, our simulations showed that JC distribution should not be frequent in the case of rare species immersed in a matrix of heterospecific adults. Overall, the model shows that a plant suffering from strong NF in monospecific stands can rarely exhibit a recruitment pattern fitting the JC model. Such counterintuitive results would provide the means to reconcile the well-established NF framework with part the forest ecologists’ community that is still skeptical towards the JC model.SynthesisOur model highlights the complex interconnection between NF intensity, stand density, and recruitment patterns explaining where and why the JC distribution occurs. Moreover, predicting the occurrence of JC in relation to stand density we clarify the relevance of this ecological phenomenon for future integration in plant community frameworks