Water-use efficiency and the effect of water deficits on crop growth and yield of Kabuli chickpea (Cicer arietinum L.) in a cool-temperate subhumid climate

The present study was conducted from 1998 to 2000, to evaluate seasonal water use and soil-water extraction by Kabuli chickpea (Cicer arietinum L.). The response of three cultivars to eight irrigation treatments in 1998/99 and four irrigation treatments in 1999/2000 at different growth stages was studied on a Wakanui silt loam soil in Canterbury, New Zealand. Evapotranspiration was measured with a neutron moisture meter and water use efficiency (WUE) was examined at crop maturity. Water use was about 426 mm for the fully irrigated treatment and at least 175 mm for the non-irrigated plants. There was a significant correlation (P<0·001) between water use and biomass yield (R²=0·80) and water use and seed yield (R²=0·75). There were also highly significant (P<0·001) interacting effects of irrigation, sowing date and cultivar on WUE and the trend was similar to that for seed yield. The estimated WUE ranged from 22–29 kg DM/ha per mm and 10–13 kg seed yield/ha per mm water use. The three chickpea cultivars were capable of drawing water from depths greater than 60 cm. However, most of the water use (0·49–0·93 mm/10 cm soil layer per day) came from the top 0–30 cm, where most of the active roots were concentrated. The study has shown that using actual evapotranspiration and water-use efficiency, the biomass yield and seed yield of Kabuli chickpeas can be accurately predicted in Canterbury. Soil water shortage has been identified as a major constraint to increasing chickpea production. Drought was quantified using the concept of maximum potential soil moisture deficit (Dpmax) calculated from climate data. Drought responses of yield, phenology, radiation use efficiency and yield components were determined, and were highly correlated with Dpmax. The maximum potential soil moisture deficit increased from about 62 mm (irrigated throughout) to about 358 mm (dryland plots). Chickpea yield, intercepted radiation and the number of pods per plant decreased linearly as the Dpmax increased. Penman's irrigation model accurately described the response of yield to drought. The limiting deficit for this type of soil was c. 165 and 84 mm for the November and December sowings in 1998/99 and 170 mm in 1999/2000. Beyond these limiting deficits, yield declined linearly with maximum potential soil moisture deficits of up to 358 mm. There was little evidence to support the idea of a moisture sensitive period in these Kabuli chickpea cultivars. Yield was increased by irrigating at any stage of crop development, provided that the water was needed as determined by the potential soil moisture deficit and sowing early in the season

Low input weed management in field peas

Two trials were conducted on a Templeton silt loam soil at Lincoln University, New Zealand (43 ° 38' S, 172 ° 28' E.) in 2007/08. The aim was to compare the competitive ability of different pea canopy architectures as influenced by genotype, population, sowing date and their interaction as a means of low input weed control strategy. The first experiment had three sowing dates, two pea genotypes and two herbicide treatments. Experiment 2 treatments were a factorial combination of four pea populations and three sown artificial weed populations. A significant sowing date x pea genotype interaction showed that in the August sowing genotype had no effect on seed yield. However, in September sown plots Pro 7035 yielded 559 g m⁻², which was 40% more than Midichi, and in the October sowing, the difference was 87% more. Herbicide-sprayed peas produced 19% more seed (508 g m⁻²) than the unsprayed plants. When no weeds were sown, the highest pea total dry matter (TDM) of 1,129 g m⁻² occurred at 200 plants m⁻². This was more than twice (513 g m⁻²) the yield of the lowest population (50 plants m⁻²). There was distinct variation in the weed spectrum over time. Coronopus didymus, Stellaria media and Lolium spp were present in relatively large numbers throughout the season. Some weeds only occurred late in the season meaning they could be successfully controlled by early sowing. It could be concluded that it is possible to obtain high pea yields by using the right sowing date and appropriate seed rate as a means of low input weed management strategy.Lincoln University Research Committee funded this research. Plant Research New Zealand limited provided the pea seed and the fungicides that were used for all the trials

Robust Digital Holography For Ultracold Atom Trapping

We have formulated and experimentally demonstrated an improved algorithm for design of arbitrary two-dimensional holographic traps for ultracold atoms. Our method builds on the best previously available algorithm, MRAF, and improves on it in two ways. First, it allows for creation of holographic atom traps with a well defined background potential. Second, we experimentally show that for creating trapping potentials free of fringing artifacts it is important to go beyond the Fourier approximation in modelling light propagation. To this end, we incorporate full Helmholtz propagation into our calculations.Comment: 7 pages, 4 figure

The evolution of sex ratio distorter suppression affects a 25 cM genomic region in the butterfly Hypolimnas bolina

Open Access ArticleSymbionts that distort their host's sex ratio by favouring the production and survival of females are common in arthropods. Their presence produces intense Fisherian selection to return the sex ratio to parity, typified by the rapid spread of host 'suppressor' loci that restore male survival/development. In this study, we investigated the genomic impact of a selective event of this kind in the butterfly Hypolimnas bolina. Through linkage mapping, we first identified a genomic region that was necessary for males to survive Wolbachia-induced male-killing. We then investigated the genomic impact of the rapid spread of suppression, which converted the Samoan population of this butterfly from a 100:1 female-biased sex ratio in 2001 to a 1:1 sex ratio by 2006. Models of this process revealed the potential for a chromosome-wide effect. To measure the impact of this episode of selection directly, the pattern of genetic variation before and after the spread of suppression was compared. Changes in allele frequencies were observed over a 25 cM region surrounding the suppressor locus, with a reduction in overall diversity observed at loci that co-segregate with the suppressor. These changes exceeded those expected from drift and occurred alongside the generation of linkage disequilibrium. The presence of novel allelic variants in 2006 suggests that the suppressor was likely to have been introduced via immigration rather than through de novo mutation. In addition, further sampling in 2010 indicated that many of the introduced variants were lost or had declined in frequency since 2006. We hypothesize that this loss may have resulted from a period of purifying selection, removing deleterious material that introgressed during the initial sweep. Our observations of the impact of suppression of sex ratio distorting activity reveal a very wide genomic imprint, reflecting its status as one of the strongest selective forces in nature.Natural Environment Research Council (NERC

Cryo-EM structure of a helicase loading intermediate containing ORC-Cdc6-Cdt1-MCM2-7 bound to DNA

In eukaryotes, the Cdt1-bound replicative helicase core MCM2-7 is loaded onto DNA by the ORC-Cdc6 ATPase to form a prereplicative complex (pre-RC) with an MCM2-7 double hexamer encircling DNA. Using purified components in the presence of ATP-γS, we have captured in vitro an intermediate in pre-RC assembly that contains a complex between the ORC-Cdc6 and Cdt1-MCM2-7 heteroheptamers called the OCCM. Cryo-EM studies of this 14-subunit complex reveal that the two separate heptameric complexes are engaged extensively, with the ORC-Cdc6 N-terminal AAA+ domains latching onto the C-terminal AAA+ motor domains of the MCM2-7 hexamer. The conformation of ORC-Cdc6 undergoes a concerted change into a right-handed spiral with helical symmetry that is identical to that of the DNA double helix. The resulting ORC-Cdc6 helicase loader shows a notable structural similarity to the replication factor C clamp loader, suggesting a conserved mechanism of action

The what and where of adding channel noise to the Hodgkin-Huxley equations

One of the most celebrated successes in computational biology is the Hodgkin-Huxley framework for modeling electrically active cells. This framework, expressed through a set of differential equations, synthesizes the impact of ionic currents on a cell's voltage -- and the highly nonlinear impact of that voltage back on the currents themselves -- into the rapid push and pull of the action potential. Latter studies confirmed that these cellular dynamics are orchestrated by individual ion channels, whose conformational changes regulate the conductance of each ionic current. Thus, kinetic equations familiar from physical chemistry are the natural setting for describing conductances; for small-to-moderate numbers of channels, these will predict fluctuations in conductances and stochasticity in the resulting action potentials. At first glance, the kinetic equations provide a far more complex (and higher-dimensional) description than the original Hodgkin-Huxley equations. This has prompted more than a decade of efforts to capture channel fluctuations with noise terms added to the Hodgkin-Huxley equations. Many of these approaches, while intuitively appealing, produce quantitative errors when compared to kinetic equations; others, as only very recently demonstrated, are both accurate and relatively simple. We review what works, what doesn't, and why, seeking to build a bridge to well-established results for the deterministic Hodgkin-Huxley equations. As such, we hope that this review will speed emerging studies of how channel noise modulates electrophysiological dynamics and function. We supply user-friendly Matlab simulation code of these stochastic versions of the Hodgkin-Huxley equations on the ModelDB website (accession number 138950) and http://www.amath.washington.edu/~etsb/tutorials.html.Comment: 14 pages, 3 figures, review articl

A Prescription for Improving Drug Formulary Decision Making

Gordon Schiff and colleagues present a new tool and checklist to help formularies make decisions about drug inclusion and to guide rational drug use

Bcl-2 protein family: Implications in vascular apoptosis and atherosclerosis

Apoptosis has been recognized as a central component in the pathogenesis of atherosclerosis, in addition to the other human pathologies such as cancer and diabetes. The pathophysiology of atherosclerosis is complex, involving both apoptosis and proliferation at different phases of its progression. Oxidative modification of lipids and inflammation differentially regulate the apoptotic and proliferative responses of vascular cells during progression of the atherosclerotic lesion. Bcl-2 proteins act as the major regulators of extrinsic and intrinsic apoptosis signalling pathways and more recently it has become evident that they mediate the apoptotic response of vascular cells in response to oxidation and inflammation either in a provocative or an inhibitory mode of action. Here we address Bcl-2 proteins as major therapeutic targets for the treatment of atherosclerosis and underscore the need for the novel preventive and therapeutic interventions against atherosclerosis, which should be designed in the light of molecular mechanisms regulating apoptosis of vascular cells in atherosclerotic lesions