Quantum quenches and driven dynamics in a single-molecule device

The nonequilibrium dynamics of molecular devices is studied in the framework of a generic model for single-molecule transistors: a resonant level coupled by displacement to a single vibrational mode. In the limit of a broad level and in the vicinity of the resonance, the model can be controllably reduced to a form quadratic in bosonic operators, which in turn is exactly solvable. The response of the system to a broad class of sudden quenches and ac drives is thus computed in a nonperturbative manner, providing an asymptotically exact solution in the limit of weak electron-phonon coupling. From the analytic solution we are able to (1) explicitly show that the system thermalizes following a local quantum quench, (2) analyze in detail the time scales involved, (3) show that the relaxation time in response to a quantum quench depends on the observable in question, and (4) reveal how the amplitude of long-time oscillations evolves as the frequency of an ac drive is tuned across the resonance frequency. Explicit analytical expressions are given for all physical quantities and all nonequilibrium scenarios under study.Comment: 23 pages, 13 figure

First-Order Type Effects in YBa2_2Cu3_3O6+x_{6+x} at the Onset of Superconductivity

We present results of Raman scattering experiments on tetragonal ${\rm (Y_{1-y}Ca_{y})Ba_{2}Cu_{3}O_{6+x}}$ for doping levels $p(x,y)$ between 0 and 0.07 holes/CuO$_2$. Below the onset of superconductivity at $p_{\rm sc1} \approx 0.06$, we find evidence of a diagonal superstructure. At $p_{\rm sc1}$, lattice and electron dynamics change discontinuously with the charge and spin properties being renormalized at all energy scales. The results indicate that charge ordering is intimately related to the transition at $p_{\rm sc1}$ and that the maximal transition temperature to superconductivity at optimal doping $T_{c}^{\rm max}$ depends on the type of ordering at $p>p_{\rm sc1}$.Comment: 4 pages, 4 figure

The Pairing Mechanism in HTSC investigated by Electronic Raman Scattering

By means of electronic Raman scattering we investigated the symmetry of the energy gap Delta(k), its temperature dependence and its variation with doping of well characterized Bi2Sr2CaCu2O8+delta single crystals. The oxygen content delta was varied between the under- and the overdoped regime by subsequently annealing the same single crystal in Ar and O2, respectively. The symmetry analysis of the polarized electronic Raman scattering is consistent with a d_x^2-y^2-wave symmetry of the energy gap in both regimes. The gap ratio 2Delta_max/k_BT_c and its temperature dependence changes with doping similar to predictions of theories based on paramagnon coupling.Comment: 3 pages, LaTeX, 2 ps figures available on request to [email protected]

Band and momentum dependent electron dynamics in superconducting Ba(Fe1−xCox)2As2{\rm Ba(Fe_{1-x}Co_{x})_2As_2} as seen via electronic Raman scattering

We present details of carrier properties in high quality ${\rm Ba(Fe_{1-x}Co_{x})_2As_2}$ single crystals obtained from electronic Raman scattering. The experiments indicate a strong band and momentum anisotropy of the electron dynamics above and below the superconducting transition highlighting the importance of complex band-dependent interactions. The presence of low energy spectral weight deep in the superconducting state suggests a gap with accidental nodes which may be lifted by doping and/or impurity scattering. When combined with other measurements, our observation of band and momentum dependent carrier dynamics indicate that the iron arsenides may have several competing superconducting ground states.Comment: 5 pages, 4 figure

Pinpointing Gap Minima in Ba(Fe0.94_{0.94}Co0.06)2_{0.06})_{2}As2_2 \textit{via} Band Structure Calculations and Electronic Raman Scattering

A detailed knowledge of the gap structure for the Fe-pnictide superconductors is still rather rudimentary, with several conflicting reports of either nodes, deep gap minima, or fully isotropic gaps on the Fermi surface sheets, both in the $k_{x}-k_{y}$ plane and along the c-axis. In this paper we present considerations for electronic Raman scattering which can help clarify the gap structure and topology using different light scattering geometries. Using density functional calculations for the Raman vertices, it is shown that the location of the gap minima may occur on loops stretching over a portion of the c-axis in Ba(Fe$_{0.94}$Co$_{0.06})_{2}$As$_2$.Comment: 4+ pages, three figure

Topological phase transition in a RNA model in the de Gennes regime

We study a simplified model of the RNA molecule proposed by G. Vernizzi, H. Orland and A. Zee in the regime of strong concentration of positive ions in solution. The model considers a flexible chain of equal bases that can pairwise interact with any other one along the chain, while preserving the property of saturation of the interactions. In the regime considered, we observe the emergence of a critical temperature T_c separating two phases that can be characterized by the topology of the predominant configurations: in the large temperature regime, the dominant configurations of the molecule have very large genera (of the order of the size of the molecule), corresponding to a complex topology, whereas in the opposite regime of low temperatures, the dominant configurations are simple and have the topology of a sphere. We determine that this topological phase transition is of first order and provide an analytic expression for T_c. The regime studied for this model exhibits analogies with that for the dense polymer systems studied by de GennesComment: 15 pages, 4 figure

MOSGA: Modular Open-Source Genome Annotator

The generation of high-quality assemblies, even for large eukaryotic genomes, has become a routine task for many biologists thanks to recent advances in sequencing technologies. However, the annotation of these assemblies - a crucial step towards unlocking the biology of the organism of interest - has remained a complex challenge that often requires advanced bioinformatics expertise. Here we present MOSGA, a genome annotation framework for eukaryotic genomes with a user-friendly web-interface that generates and integrates annotations from various tools. The aggregated results can be analyzed with a fully integrated genome browser and are provided in a format ready for submission to NCBI. MOSGA is built on a portable, customizable, and easily extendible Snakemake backend, and thus, can be tailored to a wide range of users and projects. We provide MOSGA as a publicly free available web service at https://mosga.mathematik.uni-marburg.de and as a docker container at registry.gitlab.com/mosga/mosga:latest. Source code can be found at https://gitlab.com/mosga/mosg

Raman scattering evidence for a cascade-like evolution of the charge-density-wave collective amplitude mode

The two-dimensional rare-earth tri-tellurides undergo a unidirectional charge-density-wave (CDW) transition at high temperature and, for the heaviest members of the series, a bidirectional one at low temperature. Raman scattering experiments as a function of temperature on DyTe$_3$ and on LaTe$_3$ at 6 GPa provide a clear-cut evidence for the emergence of the respective collective CDW amplitude excitations. In the unidirectional CDW phase, we surprisingly discover that the amplitude mode develops as a succession of two mean-field, BCS-like transitions in different temperature ranges