Local, but not long-distance dispersal of penguin ticks between two sub-Antarctic islands

Advances in high throughput genomic approaches are enabling the accurate appraisal of movements of diverse species, previously considered intractable. The impact of long-distance dispersal and distribution changes on species interactions (such as host-parasite interactions) is of particular importance as attempts are made to project how ecosystems will shift under environmental change. The sub-Antarctic region, comprising isolated islands separated by hundreds to thousands of kilometres of open ocean, presents an ideal model system for studying long-distance dispersal, distribution, and ecosystem change. Here we used genomic methods to determine the extent of movement of penguin ticks (Ixodes uriae) among different host species, and among penguin colonies at small (within an island) and large (among islands separated by >6000 km) scales, in the sub-Antarctic region. Our results suggest that I. uriae ticks may be readily shared between distantly related penguin species with similar phenology, but indicate that – as inferred by previous research – ticks are less likely to be shared between flighted and non-flighted sea- birds. We also find evidence for small-scale movements of penguin ticks with their hosts, but no evidence for movements between islands separated by thousands of kilometers of open ocean. These inferred limitations to penguin tick movement could be the result of restricted host movements or the inability of penguin ticks to survive extended trips at sea. Our findings help elucidate parasite-host dynamics, with implications for host health and persistence in a region experiencing rapid environmental change

Chytrid fungus infection in alpine tree frogs is associated with individual heterozygosity and population isolation but not population-genetic diversity

Chytridiomycosis, a disease caused by the emerging fungus Batrachochytrium dendrobatidis (Bd), has been implicated in the decline of over 500 amphibian species. Population declines could have important genetic consequences, including reduced genetic diversity. We contrasted genetic diversity among both long-Bd-exposed and unexposed populations of the south-east Australian alpine tree frog (Litoria verreauxii alpina) across its range. At the population level, we found no significant differences in genetic diversity between Bd-exposed and unexposed populations. Encouragingly, even Bd-infected remnant populations that are now highly isolated maintain genetic diversity comparable to populations in which Bd is absent. Spatial genetic structure among populations followed an isolation-by-distance pattern, suggesting restricted movement among remnant populations. At the individual level, greater heterozygosity was associated with reduced probability of infection. Loss of genetic diversity in remnant populations that survived chytridiomycosis epidemics does not appear to be a threat to L. v. alpina. We suggest several factors underpinning maintenance of genetic diversity: (1) remnant populations have remained large enough to avoid losses of genetic diversity; (2) many individuals in the population are able to breed once before succumbing to disease; and (3) juveniles in the terrestrial environment have low exposure to Bd, providing an annual ‘reservoir’ of genetic diversity. The association between individual heterozygosity and infection status suggests that, while other work has shown all breeding adults are typically killed by Bd, males with greater heterozygosity may survive longer and obtain fitness benefits through extended breeding opportunities. Our results highlight the critical role of life history in mitigating the impacts of Bd infection for some amphibian species, but we infer that increased isolation as a result of disease-induced population extirpations will enhance population differentiation and thus biogeographic structure

Contemporary habitat discontinuity and historic glacial ice drive genetic divergence in Chilean kelp

<p>Abstract</p> <p>Background</p> <p>South America's western coastline, extending in a near-straight line across some 35 latitudinal degrees, presents an elegant setting for assessing both contemporary and historic influences on cladogenesis in the marine environment. Southern bull-kelp (<it>Durvillaea antarctica</it>) has a broad distribution along much of the Chilean coast. This species represents an ideal model taxon for studies of coastal marine connectivity and of palaeoclimatic effects, as it grows only on exposed rocky coasts and is absent from beaches and ice-affected shores. We expected that, along the central Chilean coast, <it>D. antarctica </it>would show considerable phylogeographic structure as a consequence of the isolating effects of distance and habitat discontinuities. In contrast, we hypothesised that further south - throughout the region affected by the Patagonian Ice Sheet at the Last Glacial Maximum (LGM) - <it>D. antarctica </it>would show relatively little genetic structure, reflecting postglacial recolonisation.</p> <p>Results</p> <p>Mitochondrial (COI) and chloroplast (<it>rbc</it>L) DNA analyses of <it>D. antarctica </it>from 24 Chilean localities (164 individuals) revealed two deeply divergent (4.5 - 6.1% for COI, 1.4% for <it>rbc</it>L) clades from the centre and south of the country, with contrasting levels and patterns of genetic structure. Among populations from central Chile (32° - 44°S), substantial phylogeographic structure was evident across small spatial scales, and a significant isolation-by-distance effect was observed. Genetic disjunctions in this region appear to correspond to the presence of long beaches. In contrast to the genetic structure found among central Chilean populations, samples from the southern Chilean Patagonian region (49° - 56°S) were genetically homogeneous and identical to a haplotype recently found throughout the subantarctic region.</p> <p>Conclusions</p> <p>Southern (Patagonian) Chile has been recolonised by <it>D. antarctica </it>relatively recently, probably since the LGM. The inferred trans-oceanic ancestry of these Patagonian populations supports the notion that <it>D. antarctica </it>is capable of long-distance dispersal via rafting. In contrast, further north in central Chile, the correspondence of genetic disjunctions in <it>D. antarctica </it>with long beaches indicates that habitat discontinuity drives genetic isolation among established kelp populations. We conclude that rafting facilitates colonisation of unoccupied shores, but has limited potential to enhance gene-flow among established populations. Broadly, this study demonstrates that some taxa may be considered to have either high or low dispersal potential across different temporal and geographic scales.</p

The genomic footprint of coastal earthquake uplift

Theory suggests that catastrophic earth-history events can drive rapid biological evolution, but empirical evidence for such processes is scarce. Destructive geological events such as earthquakes can represent large-scale natural experiments for inferring such evolutionary processes. We capitalized on a major prehistoric (800 yr BP) geological uplift event affecting a southern New Zealand coastline to test for the lasting genomic impacts of disturbance. Genome-wide analyses of three co-distributed keystone kelp taxa revealed that post-earthquake recolonization drove the evolution of novel, large-scale intertidal spatial genetic ‘sectors’ which are tightly linked to geological fault boundaries. Demographic simulations confirmed that, following widespread extirpation, parallel expansions into newly vacant habitats rapidly restructured genome-wide diversity. Interspecific differences in recolonization mode and tempo reflect differing ecological constraints relating to habitat choice and dispersal capacity among taxa. This study highlights the rapid and enduring evolutionary effects of catastrophic ecosystem disturbance and reveals the key role of range expansion in reshaping spatial genetic patterns

Evidence of plant and animal communities at exposed and subglacial (cave) geothermal sites in Antarctica

Geothermal areas, such as volcanoes, might have acted as glacial microrefugia for a wide range of species. The heavily glaciated but volcanically active Antarctic continent presents an ideal system for assessing this hypothesis. Ice-free terrain around volcanoes in Antarctica is, however, often restricted to small patches, whereas subglacial cave systems, formed by vented volcanic steam, can be extensive and interconnected. No observations of macrobiota have yet been made for subglacial geothermal environments in Antarctica, but these organisms are often patchily distributed and can be difficult to find. We carried out metabarcoding (eDNA) analyses of soil samples taken from exposed areas on three volcanoes in Victoria Land, and subglacial caves on Mount Erebus. We found evidence of numerous eukaryotic groups, including mosses, algae, arthropods, oligochaetes and nematodes, at both exposed and subglacial sites. Our findings support the notion that geothermal areas—including subglacial environments—can nurture biodiversity in glaciated regions

Meta-analysis of Antarctic phylogeography reveals strong sampling bias and critical knowledge gaps

DATA AVAILABILITY STATEMENT : This study used previously published genetic data from diverse studies. All metadata (GenBank accessions, paper references, geolocations etc.) for data used in this study are available from the Dryad Digital Repository: . This article contains no original data.Much of Antarctica's highly endemic terrestrial biodiversity is found in small ice-free patches. Substantial genetic differentiation has been detected among populations across spatial scales. Sampling is, however, often restricted to commonly-accessed sites and we therefore lack a comprehensive understanding of broad-scale biogeographic patterns, which could impede forecasts of the nature and impacts of future change. Here, we present a synthesis of published genetic studies across terrestrial Antarctica and the broader Antarctic region, aiming to identify current biogeographic patterns, environmental drivers of diversity and future research priorities. A database of all published genetic research from terrestrial fauna and flora (excl. microbes) across the Antarctic region was constructed. This database was then filtered to focus on the most well-represented taxa and markers (mitochondrial COI for fauna, and nuclear ITS for flora). The final dataset comprised 7222 records, spanning 153 studies of 335 different species. There was strong taxonomic bias towards flowering plants (52% of all floral data sets) and springtails (54% of all faunal data sets), and geographic bias towards the Antarctic Peninsula and Victoria Land. Recent connectivity between the Antarctic continent and neighbouring landmasses, such as South America and the Southern Ocean Islands (SOIs), was inferred for some groups, but patterns observed for most taxa were strongly influenced by sampling biases. Above-ground wind speed and habitat heterogeneity were positively correlated with genetic diversity indices overall though environment was a generally poor predictor of genetic diversity. The low resolution and variable coverage of data may also have reduced the power of our comparative inferences. In the future, higher-resolution data, such as genomic SNPs and environmental modelling, alongside targeting sampling of remote sites and under sampled taxa, will address current knowledge gaps and greatly advance our understanding of evolutionary processes across the Antarctic region.The New Zealand Antarctic Science Platform; a Royal Society of New Zealand Rutherford Discovery Fellowship via an Honours scholarship; a Royal Society of New Zealand Te Apārangi Marsden Fund grant; Biodiversa ASICS funding (EU-Biodiversa ASICS project).http://www.ecography.orghj2023Plant Production and Soil Scienc

Global Connectivity of Southern Ocean Ecosystems

Southern Ocean ecosystems are globally important. Processes in the Antarctic atmosphere, cryosphere, and the Southern Ocean directly influence global atmospheric and oceanic systems. Southern Ocean biogeochemistry has also been shown to have global importance. In contrast, ocean ecological processes are often seen as largely separate from the rest of the global system. In this paper, we consider the degree of ecological connectivity at different trophic levels, linking Southern Ocean ecosystems with the global ocean, and their importance not only for the regional ecosystem but also the wider Earth system. We also consider the human system connections, including the role of Southern Ocean ecosystems in supporting society, culture, and economy in many nations, influencing public and political views and hence policy. Rather than Southern Ocean ecosystems being defined by barriers at particular oceanic fronts, ecological changes are gradual due to cross-front exchanges involving oceanographic processes and organism movement. Millions of seabirds and hundreds of thousands of cetaceans move north out of polar waters in the austral autumn interacting in food webs across the Southern Hemisphere, and a few species cross the equator. A number of species migrate into the east and west ocean-basin boundary current and continental shelf regions of the major southern continents. Human travel in and out of the Southern Ocean region includes fisheries, tourism, and scientific vessels in all ocean sectors. These operations arise from many nations, particularly in the Northern Hemisphere, and are important in local communities as well as national economic, scientific, and political activities. As a result of the extensive connectivity, future changes in Southern Ocean ecosystems will have consequences throughout the Earth system, affecting ecosystem services with socio-economic impacts throughout the world. The high level of connectivity also means that changes and policy decisions in marine ecosystems outside the Southern Ocean have consequences for ecosystems south of the Antarctic Polar Front. Knowledge of Southern Ocean ecosystems and their global connectivity is critical for interpreting current change, projecting future change impacts, and identifying integrated strategies for conserving and managing both the Southern Ocean and the broader Earth system

Pathogen inferred to have dispersed thousands of kilometres at sea, infecting multiple keystone kelp species

Protistan pathogens have been found to infect populations of some large brown macroalgae. Infection could reduce the ability of macroalgae to withstand hydrodynamic pressures through weakening tissues and reducing flexibility. Widespread mortality of macroalgae if disease outbreaks were to occur could have important flow-on consequences for biodiversity and ecosystem function. Recent discoveries of the protistan pathogen Maullinia infecting the ecologically keystone southern bull kelp Durvillaea in Chile, Australia, and on Marion Island, raise the possibility that this pathogen is dispersing across ocean basins with buoyant hosts. To determine whether Maullinia also infects southern bull kelp in New Zealand, samples of gall-like tissue from Durvillaea antarctica, D. poha, and D. willana were collected from intertidal sites, and genetic analyses (sequencing of partial 18S rRNA) carried out. Maullinia infections were detected in all three species of Durvillaea. Phylogenetic analyses show a close relationship of New Zealand Maullinia to M. braseltonii previously detected in Chile and on Marion Island. Based on its genetic similarity to distant lineages and its presence on buoyant hosts that have been shown to drift long distances at seas, we infer that Maullinia has dispersed across the Southern Ocean through rafting of infected bull kelp. Understanding the capacity of pathogens to disperse across oceans is critical part of forecasting and managing ecosystem responses to environmental change

Local, but not long-distance dispersal of penguin ticks between two sub-Antarctic islands

Advances in high throughput genomic approaches are enabling the accurate appraisal of movements of diverse species, previously considered intractable. The impact of long-distance dispersal and distribution changes on species interactions (such as host-parasite interactions) is of particular importance as attempts are made to project how ecosystems will shift under environmental change. The sub-Antarctic region, comprising isolated islands separated by hundreds to thousands of kilometres of open ocean, presents an ideal model system for studying long-distance dispersal, distribution, and ecosystem change. Here we used genomic methods to determine the&nbsp;extent of movement of penguin ticks (Ixodes uriae) among different host species, and among penguin colonies at small (within an island) and large (among islands separated by &gt;6000 km) scales, in the sub-Antarctic region. Our results suggest that I. uriae ticks may be readily shared between distantly related penguin species with similar phenology, but indicate that – as inferred by previous research – ticks are less likely to be shared between flighted and non-flighted sea- birds. We also find evidence for small-scale movements of penguin ticks with their hosts, but no evidence for movements between islands separated by thousands of kilometers of open ocean. These inferred limitations to penguin tick movement could be the result of restricted host movements or the inability of penguin ticks to survive extended trips at sea. Our findings help elucidate parasite-host dynamics, with implications for host health and persistence in a region experiencing rapid environmental change

Rapid winter warming could disrupt coastal marine fish community structure

Marine ecosystems are under increasing threat from warming waters. Winter warming is occurring at a faster rate than summer warming for ecosystems around the world, but most studies focus on the summer. Here, we show that winter warming could affect coastal fish community compositions in the Mediterranean Sea using a model that captures how biotic associations change with sea surface temperature to influence species’ distributions for 215 fish species. Species’ associations control how communities are formed, but the effect of winter warming on associations will be on average four times greater than that of summer warming. Projections using future climate scenarios show that 60% of coastal Mediterranean grid cells are expected to lose fish species by 2040. Heavily fished areas in the west will experience diversity losses that exacerbate regime shifts linked to overexploitation. Incorporating seasonal differences will therefore be critical for developing effective coastal fishery and marine ecosystem management