Cytochromes and iron sulfur proteins in sulfur metabolism of phototrophic bacteria

Dissimilatory sulfur metabolism in phototrophic sulfur bacteria provides the bacteria with electrons for photosynthetic electron transport chain and, with energy. Assimilatory sulfate reduction is necessary for the biosynthesis of sulfur-containing cell components. Sulfide, thiosulfate, and elemental sulfur are the sulfur compounds most commonly used by phototrophic bacteria as electron donors for anoxygenic photosynthesis. Cytochromes or other electron transfer proteins, like high-potential-iron-sulfur protein (HIPIP) function as electron acceptors or donors for most enzymatic steps during the oxidation pathways of sulfide or thiosulfate. Yet, heme- or siroheme-containing proteins themselves undergo enzymatic activities in sulfur metabolism. Sirohemes comprise a porphyrin-like prosthetic group of sulfate reductase. eenzymatic reactions involve electron transfer. Electron donors or acceptors are necessary for each reaction. Cytochromes and iron sulfur problems, are able to transfer electrons

Effect of weed management strategies on the risk of enteric pathogen transfer into the food chain and lettuce quality

The hygienic quality of raw edible vegetables such as lettuce may be influenced by pathogen transfer from soil to plant, which might occur during weed control by hoeing or as splash-effects during rainfall. The hygienic quality is often discussed when farmyard manures are applied during production, as e.g. in organic farming systems. In a field experiment, the effects of weed control on pathogen transfer from soil fertilised with farmyard manure to lettuce (Lactuca sativa, var. capitata) were evaluated. First results do not confirm pathogen transfer by mechanical weeding or splash effects during rainfall

Microbial communities and microprofiles of sulfide and oxygen of alum rock sulfur springs

The microbial community of Alum Rock sulfur spring Site 3 was studied along one branch of the main stream and between the two branches, 150 cm distant from the source. The community at the source was dominated by green sulfur photosynthetic bacteria of the genus Chlorobium. At 15 cm to 35 cm from the source dominance in the community shifted to the genus Flexibacter at the surface of the mat and purple bacteria of the genus Chromatium underneath. At 50 cm to 80 cm colorless sulfur oxidizing bacteria of the genus Thiothrix began to appear. At 100 cm to 150 cm, the surface of the mat was still dominated by Flexibacter, but underneath dominance shifted to purple sulfur bacteria as above, as well as cyanobacteria of the genus Oscillatoria and Pseudonabaena. The measurements of temperature along the stream showed no significant gradient. Community variations appear to be controlled more by sulfide than temperature. Ten ml of the overlying water were taken and fixed immediately to determine the sulfide concentration by the methylene blue method. A sulfide concentration of 106 micro-m was calculated for the overlying water

Optical phase cloaking of 700-nm light waves in the far field by a three-dimensional carpet cloak

Transformation optics is a design tool that connects geometry of space and propagation of light. Invisibility cloaking is a corresponding benchmark example. Recent experiments at optical frequencies have demonstrated cloaking for the light amplitude ("ray cloaking"). In this Letter, we demonstrate far-field cloaking of the light phase ("wave cloaking") by interferometric microscope-imaging experiments on the previously introduced three-dimensional carpet cloak at 700-nm wavelength and for arbitrary polarization of light

A review of factors that influence individual compliance with mass drug administration for elimination of lymphatic filariasis.

BACKGROUND: The success of programs to eliminate lymphatic filariasis (LF) depends in large part on their ability to achieve and sustain high levels of compliance with mass drug administration (MDA). This paper reports results from a comprehensive review of factors that affect compliance with MDA. METHODOLOGY/PRINCIPAL FINDINGS: Papers published between 2000 and 2012 were considered, and 79 publications were included in the final dataset for analysis after two rounds of selection. While results varied in different settings, some common features were associated with successful programs and with compliance by individuals. Training and motivation of drug distributors is critically important, because these people directly interact with target populations, and their actions can affect MDA compliance decisions by families and individuals. Other important programmatic issues include thorough preparation of personnel, supplies, and logistics for implementation and preparation of the population for MDA. Demographic factors (age, sex, income level, and area of residence) are often associated with compliance by individuals, but compliance decisions are also affected by perceptions of the potential benefits of participation versus the risk of adverse events. Trust and information can sometimes offset fear of the unknown. While no single formula can ensure success MDA in all settings, five key ingredients were identified: engender trust, tailor programs to local conditions, take actions to minimize the impact of adverse events, promote the broader benefits of the MDA program, and directly address the issue of systematic non-compliance, which harms communities by prolonging their exposure to LF. CONCLUSIONS/SIGNIFICANCE: This review has identified factors that promote coverage and compliance with MDA for LF elimination across countries. This information may be helpful for explaining results that do not meet expectations and for developing remedies for ailing MDA programs. Our review has also identified gaps in understanding and suggested priority areas for further research

Effect of random interactions in spin baths on decoherence

We study the decoherence of a central spin 1/2 induced by a spin bath with intrabath interactions. Since we are interested in the cumulative effect of interaction and disorder, we study baths comprising Ising spins with random ferro- and antiferromagnetic interactions between the spins. Using the resolvent operator method which goes beyond the standard Born-Markov master equation approach, we show that, in the weak coupling regime, the decoherence of the central spin at all times is entirely determined by the local-field distribution or equivalently, the dynamical structure factor of the Ising bath. We present analytic results for the Ising spin chain bath at arbitrary temperature for different distributions of the intrabath interaction strengths. We find clear evidence of non-Markovian behavior in the low temperature regime. We also consider baths described by Ising models on higher-dimensional lattices. We find that interactions lead to a significant reduction of the decoherence. An important feature of interacting spinbaths is the saturation of the asymptotic Markovian decay rate at high temperatures, as opposed to the conventional Ohmic boson bath.Comment: 13 page

The Aggregation of the Agricultural Supply Utilisation Accounts

It is our hope that the publication of this paper will satisfy a number of requests, some of which stem from the very distant past, to provide detailed information about the data aggregation done by the FAP at IIASA. The Supply Utilisation Accounts on Agricultural Products (SUA), published by the FAO, have been the starting point for the aggregation of agricultural commodities and the time series available for the FAP commodity lists, as well as the basis for the FAP Data Bank. The SUA and its aggregates have been widely used in the FAP Modeling work, at IIASA and at the collaborating institutions. This paper gives first some general explanations concerning the original SUA, and concentrates then mainly on the "aggregation-logic", for general cases and for special cases. The last section deals with the computerization of the aggregation, as this constituted the main effort and seems to be a very valuable idea for similar types of calculations. The appendixes, a large part of this paper, go into greater detail for the interested reader and for the users of the accounts

Optimization of nanostructured permalloy electrodes for a lateral hybrid spin-valve structure

Ferromagnetic electrodes of a lateral semiconductor-based spin-valve structure are designed to provide a maximum of spin-polarized injection current. A single-domain state in remanence is a prerequisite obtained by nanostructuring Permalloy thin film electrodes. Three regimes of aspect ratios $m$ are identified by room temperature magnetic force microscopy: (i) high-aspect ratios of $m \ge 20$ provide the favored remanent single-domain magnetization states, (ii) medium-aspect ratios $m \sim 3$ to $m \sim 20$ yield highly remanent states with closure domains and (iii) low-aspect ratios of $m \le 3$ lead to multi-domain structures. Lateral kinks, introduced to bridge the gap between micro- and macroscale, disturb the uniform magnetization of electrodes with high- and medium-aspect ratios. However, vertical flanks help to maintain a uniformly magnetized state at the ferromagnet-semiconcuctor contact by domain wall pinning.Comment: revised version, major structural changes, figures reorganized,6 pages, 8 figures, revte