Some Thoughts on Terminology and Discipline in Design

In this speculative paper, I will argue that the design community should attempt to develop a “dictionary” of the language of design, along the same lines as the Oxford English Dictionary was and is developed: as a catalogue of the living use of terms. I will sketch an outline of how such a project could be started quite easily with modern technologies. I will then consider one word in particular – “discipline” – as an example of the need for such a dictionary, by examining the various senses of the word and how even just reflecting on that can illuminate issues of clear communications. Keywords: Terminology; Lexicography; Semantics; Dictionary; Communication; Language.</p

Experimental effects on dynamics and thermodynamics in nuclear reactions on the symmetry energy as seen by the CHIMERA 4π\pi detector

Heavy ion collisions have been widely used in the last decade to constraint the parameterizations of the symmetry energy term of nuclear equation of state (EOS) for asymmetric nuclear matter as a function of baryonic density. In the Fermi energy domain one is faced with variations of the density within a narrow range of values around the saturation density $\rho_0$=0.16 fm$^{-3}$ down towards sub-saturation densities. The experimental observables which are sensitive to the symmetry energy are constructed starting from the detected light particles, clusters and heavy fragments that, in heavy ion collisions, are generally produced by different emission mechanisms at different stages and time scales of the reaction. In this review the effects of dynamics and thermodynamics on the symmetry energy in nuclear reactions are discussed and characterized using an overview of the data taken so far with the CHIMERA multi-detector array.Comment: 21 pages, 25 figures. Review to appear in EPJA special volume on nuclear symmetry energ

Coalescent histories for lodgepole species trees

Coalescent histories are combinatorial structures that describe for a given gene tree and species tree the possible lists of branches of the species tree on which the gene tree coalescences take place. Properties of the number of coalescent histories for gene trees and species trees affect a variety of probabilistic calculations in mathematical phylogenetics. Exact and asymptotic evaluations of the number of coalescent histories, however, are known only in a limited number of cases. Here we introduce a particular family of species trees, the \emph{lodgepole} species trees $(\lambda_n)_{n\geq 0}$, in which tree $\lambda_n$ has $m=2n+1$ taxa. We determine the number of coalescent histories for the lodgepole species trees, in the case that the gene tree matches the species tree, showing that this number grows with $m!!$ in the number of taxa $m$. This computation demonstrates the existence of tree families in which the growth in the number of coalescent histories is faster than exponential. Further, it provides a substantial improvement on the lower bound for the ratio of the largest number of matching coalescent histories to the smallest number of matching coalescent histories for trees with $m$ taxa, increasing a previous bound of $(\sqrt{\pi} / 32)[(5m-12)/(4m-6)] m \sqrt{m}$ to $[ \sqrt{m-1}/(4 \sqrt{e}) ]^{m}$. We discuss the implications of our enumerative results for phylogenetic computations

On the number of ranked species trees producing anomalous ranked gene trees

Analysis of probability distributions conditional on species trees has demonstrated the existence of anomalous ranked gene trees (ARGTs), ranked gene trees that are more probable than the ranked gene tree that accords with the ranked species tree. Here, to improve the characterization of ARGTs, we study enumerative and probabilistic properties of two classes of ranked labeled species trees, focusing on the presence or avoidance of certain subtree patterns associated with the production of ARGTs. We provide exact enumerations and asymptotic estimates for cardinalities of these sets of trees, showing that as the number of species increases without bound, the fraction of all ranked labeled species trees that are ARGT-producing approaches 1. This result extends beyond earlier existence results to provide a probabilistic claim about the frequency of ARGTs

Universal quantum magnetometry with spin states at equilibrium

We address metrological protocols for the estimation of the intensity and the orientation of a magnetic field, and show that quantum-enhanced precision may be achieved by probing the field with an arbitrary spin at thermal equilibrium. We derive a general expression for the ultimate achievable precision, as given by the quantum Fisher information, and express this quantity in terms of common thermodynamic quantities. We also seek for the optimal observable, and show that it corresponds to the spin projection along a suitable direction, defined by a universal function of the spin temperature. Finally, we prove the robustness of our scheme against deviations of the measured spin projection from optimality.Comment: Phys. Rev. Lett., in pres

Fast filtering and animation of large dynamic networks

Detecting and visualizing what are the most relevant changes in an evolving network is an open challenge in several domains. We present a fast algorithm that filters subsets of the strongest nodes and edges representing an evolving weighted graph and visualize it by either creating a movie, or by streaming it to an interactive network visualization tool. The algorithm is an approximation of exponential sliding time-window that scales linearly with the number of interactions. We compare the algorithm against rectangular and exponential sliding time-window methods. Our network filtering algorithm: i) captures persistent trends in the structure of dynamic weighted networks, ii) smoothens transitions between the snapshots of dynamic network, and iii) uses limited memory and processor time. The algorithm is publicly available as open-source software.Comment: 6 figures, 2 table