44107_sanger_tree

Fasta alignment for Figure S2 panel e (Chr19 Amplicon3:Chr19:44107 , all P. tremuloides clones included

Admixture_inputfiles

Plink input SNP files (from mapping to the P. trichocarpa reference genome v2.2) used for Admixture analysis in T52 (T52v2maf01gr1_LDprunned_thin01), B34 (B34v2maf01gr1_LDprunned) and BT68 (BT68v2POPSTnew

sanger_7690067

Fasta aligment of Amplicon1:Chr9:7690067 with all P. tremuloides clones included used for generating phylogenetic tree on Figure S2 panel

41515_sanger_all_tree_ML

Newick tree file for Figure S2 panel d (Chr19 Amplicon2:Chr19:41515, all P. tremuloides clones included

chr19_tree

Fasta aligment of concatenated Amplicon1:Chr19:40024, Amplicon2:Chr19:41515 and Amplicon3:Chr19:44107, used for generating phylogenetic tree on Figure 3b

44107_sanger_tree_ML

Newick tree file for Figure S2 panel e (Chr19 Amplicon3:Chr19:44107 , all P. tremuloides clones included

Association_SNPfiles_Plink

Plink input SNP files (from mapping to the P. trichocarpa reference genome v2.2) used for GWAS in T52 (T52v2maf01gr09), B34 (B34v2maf01gr09) and BT68 (BT68v2maf01gr09new

PairwiseLD

This file contains estimates of pairwirse linkage disequilibrium (r^2) for all 623 SNPs significantly associated with gender in mapping population T52

41515_sanger_all_tree

Fasta alignment for Figure S2 panel d (Chr19 Amplicon2:Chr19:41515, all P. tremuloides clones included

chr19_tree_ML

Newick tree file for Figure 3 panel b (concatenated Amplicon1:Chr19:40024, Amplicon2:Chr19:41515 and Amplicon3:Chr19:44107