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Genome annotation. (XLSX 9 kb

H_schachtii

Genotypic data (Genepop format) for the species Heterodera schachti

G_tabacum

Genotypic data (Genepop format) for the species Globodera tabacu

nGr.v1.0.iprscan.xml

inter pro scan as gzipped xm

nGr.v1.0.iprscan.xml

interproscan as ts

nGr.v1.0.annotation+TE

GFF file with locations of all gene calls in the G. rostochiensis genome and all transposable element predictions

Additional file 19: Figure S9. of The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence

Synteny clusters. Network representation of i-ADHoRe results. Scaffolds are represented as nodes (blue = G. rostochiensis, ochre = G. pallida) whose diameter is scaled by scaffold length and vertices are drawn between them if five or more anchorpoints (i.e. syntenic proteins, numbers on vertices indicate count of anchorpoints) have been found. The biggest cluster (dashed black line) is composed of 26 G. rostochiensis scaffolds (4.99 Mb) and 35 G. pallida scaffolds (5.54 Mb). Part of this cluster (grey dotted line) is shown in Fig. 6. (PDF 570 kb

nGr.v1.0.blast2go

blast2go annotation as gff3 fil

nGr.v1.0.blast2go.txt

blast2go annotation as gzipped text fil

Gr_pops.new.vs.nGr.v1.1.GQ.vcf.norm.filtered.vcf.snpeff.vcf.gz.data.txt

snpeff parsed vcf for G. rostochiensis pathotypes Ro1, 2, 3, 4, 5