Process techniques study of integrated circuits Interim scientific report, May 1968 - Feb. 1969

Oxide defects and shear stress effects in integrated circuit

Ground State Spin Structure of Strongly Interacting Disordered 1D Hubbard Model

We study the influence of on-site disorder on the magnetic properties of the ground state of the infinite U 1D Hubbard model. We find that the ground state is not ferromagnetic. This is analyzed in terms of the algebraic structure of the spin dependence of the Hamiltonian. A simple explanation is derived for the 1/N periodicity in the persistent current for this model.Comment: 3 pages, no figure

Charge fluctuations and boundary conditions of biological ion channels:effect on the ionic transition rate

A self-consistent solution is derived for the Poisson-Nernst-Planck (PNP) equation, valid both inside a biological ion channel and in the adjacent bulk fluid. An iterative procedure is used to match the two solutions together at the channel mouth. Charge fluctuations at the mouth are modeled as shot noise flipping the height of the potential barrier at the selectivity site. The resultant estimates of the conductivity of the ion channel are in good agreement with Gramicidin experimental measurements and they reproduce the observed current saturation with increasing concentration

Numerical calculation of the combinatorial entropy of partially ordered ice

Using a one-parameter case as an example, we demonstrate that multicanonical simulations allow for accurate estimates of the residual combinatorial entropy of partially ordered ice. For the considered case corrections to an (approximate) analytical formula are found to be small, never exceeding 0.5%. The method allows one as well to calculate combinatorial entropies for many other systems.Comment: Extended version: 7 pages, 10 figures (v1 is letter-type version

Pair creation in transport equations using the equal-time Wigner function

Based on the equal-time Wigner function for the Klein-Gordon field, we discuss analytically the mechanism of pair creation in a classical electromagnetic field including back-reaction. It is shown that the equations of motion for the Wigner function can be reduced to a variable-frequency oscillator. The pair-creation rate results then from a calculation analogous to barrier penetration in nonrelativistic quantum mechanics. The Wigner function allows one to utilize this treatment for the formulation of an effective transport theory for the back-reaction problem with a pair-creation source term including Bose enhancement.Comment: 19 pages, LaTeX, UFTP 316/199

Energetics of discrete selectivity bands and mutation-induced transitions in the calcium-sodium ion channels family

We use Brownian dynamics (BD) simulations to study the ionic conduction and valence selectivity of a generic electrostatic model of a biological ion channel as functions of the fixed charge Qf at its selectivity filter. We are thus able to reconcile the discrete calcium conduction bands recently revealed in our BD simulations, M0 (Qf = 1e), M1 (3e), M2 (5e), with a set of sodium conduction bands L0 (0.5e), L1 (1.5e), thereby obtaining a completed pattern of conduction and selectivity bands vs Qf for the sodium-calcium channels family. An increase of Qf leads to an increase of calcium selectivity: L0 (sodium-selective, nonblocking channel) → M0 (nonselective channel) → L1 (sodium-selective channel with divalent block) → M1 (calcium-selective channel exhibiting the anomalous mole fraction effect). We create a consistent identification scheme where the L0 band is putatively identified with the eukaryotic sodium channel The scheme created is able to account for the experimentally observed mutation-induced transformations between nonselective channels, sodium selective channels, and calcium-selective channels, which we interpret as transitions between different rows of the identification table. By considering the potential energy changes during permeation, we show explicitly that the multi-ion conduction bands of calcium and sodium channels arise as the result of resonant barrierless conduction. The pattern of periodic conduction bands is explained on the basis of sequential neutralization taking account of self-energy, as Qf (z,i) = ze(1/2 + i), where i is the order of the band and z is the valence of the ion. Our results confirm the crucial influence of electrostatic interactions on conduction and on the Ca2+/Na+ valence selectivity of calcium and sodium ion channels. The model and results could be also applicable to biomimetic nanopores with charged walls

Stochastic dynamics of remote knock-on permeation in biological ion channels

Brownian dynamics simulations provide evidence for a remote knock-on mechanism facilitating the permeation of a biological ion channel by an ion that is initially trapped at the selectivity filter (SF). Unlike the case of conventional direct knock-on, the second ion that instigates permeation does not need to enter the channel. Nor does it necessarily take the place of the permeating ion at the SF, and it can even be of a different ionic species. The study is based on the simultaneous, self-consistent, solution of the coupled Poisson and Langevin equations for a simple generic model, taking account of all the charges present. The new permeation mechanism involves electrostatic amplification attributable to the permittivity mismatch between water and protein: the arrival of the instigating ion at the channel entrance reduces the exit barrier for the ion trapped at the SF, facilitating escape