6 research outputs found
GWAS of longevity in CHARGE consortium confirms APOE and FOXO3 candidacy.
To access publisher's full text version of this article, please click on the hyperlink in Additional Links field or click on the hyperlink at the top of the page marked Files.
This article is open access.The genetic contribution to longevity in humans has been estimated to range from 15% to 25%. Only two genes, APOE and FOXO3, have shown association with longevity in multiple independent studies.We conducted a meta-analysis of genome-wide association studies including 6,036 longevity cases, age ≥90 years, and 3,757 controls that died between ages 55 and 80 years. We additionally attempted to replicate earlier identified single nucleotide polymorphism (SNP) associations with longevity.In our meta-analysis, we found suggestive evidence for the association of SNPs near CADM2 (odds ratio [OR] = 0.81; p value = 9.66 Ă— 10(-7)) and GRIK2 (odds ratio = 1.24; p value = 5.09 Ă— 10(-8)) with longevity. When attempting to replicate findings earlier identified in genome-wide association studies, only the APOE locus consistently replicated. In an additional look-up of the candidate gene FOXO3, we found that an earlier identified variant shows a highly significant association with longevity when including published data with our meta-analysis (odds ratio = 1.17; p value = 1.85Ă—10(-10)).We did not identify new genome-wide significant associations with longevity and did not replicate earlier findings except for APOE and FOXO3. Our inability to find new associations with survival to ages ≥90 years because longevity represents multiple complex traits with heterogeneous genetic underpinnings, or alternatively, that longevity may be regulated by rare variants that are not captured by standard genome-wide genotyping and imputation of common variants.Netherlands Organisation of Scientific Research NWO Investments
175.010.2005.011
911-03-012
Research Institute for Diseases in the Elderly
014-93-015
RIDE2
Netherlands Genomics Initiative (NGI)/Netherlands Organisation for Scientific Research (NWO)
050-060-810
Erasmus Medical Center
Erasmus University, Rotterdam
Netherlands Organization for the Health Research and Development (ZonMw)
Research Institute for Diseases in the Elderly (RIDE)
Ministry of Education, Culture and Science
Ministry for Health, Welfare and Sports
European Commission (DG XII)
Municipality of Rotterdam
National Institutes of Health
National Institute on Aging (NIA)
R01 AG005407
R01 AR35582
R01 AR35583
R01 AR35584
R01 AG005394
R01 AG027574
R01 AG027576
AG023629
R01AG29451
U01AG009740
RC2 AG036495
RC4 AG039029
P30AG10161
R01AG17917
R01AG15819
R01AG30146
U01-AG023755
U19-AG023122
NHLBI
HHSN 268201200036C
HHSN268200800007C
N01HC55222
N01HC85079
N01HC85080
N01HC85081
N01HC85082
N01HC85083
N01HC 85086
HL080295
HL087652
HL105756
National Institute of Neurological Disorders and Stroke (NINDS)
National Center for Advancing Translational Sciences, CTSI
UL1TR000124
National Institute of Diabetes and Digestive and Kidney Disease Diabetes Research Center (DRC)
DK063491
National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
National Center for Research Resources (NCRR)
NIH Roadmap for Medical Research
U01 AR45580
U01 AR45614
U01 AR45632
U01 AR45647
U01 AR45654
U01 AR45583
U01 AG18197
U01-AG027810
UL1 RR024140
NIAMS
R01-AR051124
RC2ARO58973
National Heart, Lung and Blood Institute's Framingham Heart Study
N01-HC-25195
Affymetrix, Inc
N02-HL-6-4278
Robert Dawson Evans Endowment of the Department of Medicine at Boston University School of Medicine
Boston Medical Center
National Institute of Arthritis, Musculoskeletal and Skin Diseases
NIA
R01 AR/AG 41398
NIH
N01-AG-12100
NIA Intramural Research Program
Hjartavernd (the Icelandic Heart Association)
Althingi (the Icelandic Parliament)
Illinois Department of Public Health
Translational Genomics Research Institute
Italian Ministry of Health
ICS110.1/RF97.71
U.S. National Institute on Aging
263 MD 9164
263 MD 821336
Intramural Research Program of the NIH, National Institute on Aging
1R01AG028321
1R01HL09257
GWAS of Longevity in CHARGE Consortium Confirms APOE and FOXO3 Candidacy
Background. The genetic contribution to longevity in humans has been estimated to range from 15% to 25%. Only two genes, APOE and FOXO3, have shown association with longevity in multiple independent studies
GWAS of longevity in CHARGE consortium confirms APOE and FOXO3 candidacy
Background. The genetic contribution to longevity in humans has been estimated to range from 15% to 25%. Only two genes, APOE and FOXO3, have shown association with longevity in multiple independent studies. Methods. We conducted a meta-analysis of genome-wide association studies including 6,036 longevity cases, age90 years, and 3,757 controls that died between ages 55 and 80 years. We additionally attempted to replicate earlier identified single nucleotide polymorphism (SNP) associations with longevity. Results. In our meta-analysis, we found suggestive evidence for the association of SNPs near CADM2 (odds ratio [OR] = 0.81; p value = 9.66 Ă— 10-7) and GRIK2 (odds ratio = 1.24; p value = 5.09 Ă— 10-8) with longevity. When attempting to replicate findings earlier identified in genome-wide association studies, only the APOE locus consistently replicated. In an additional look-up of the candidate gene FOXO3, we found that an earlier identified variant shows a highly significant association with longevity when including published data with our meta-analysis (odds ratio = 1.17; p value = 1.85Ă—10-10). Conclusions. We did not identify new genome-wide significant associations with longevity and did not replicate earlier findings except for APOE and FOXO3. Our inability to find new associations with survival to ages90 years because longevity represents multiple complex traits with heterogeneous genetic underpinnings, or alternatively, that longevity may be regulated by rare variants that are not captured by standard genome-wide genotyping and imputation of common variants