The sensory impacts of climate change: bathymetric shifts and visually mediated interactions in aquatic species

This is the author accepted manuscript. The final version is available from The Royal Society via the DOI in this record Visual perception is, in part, a function of the ambient illumination spectrum. In aquatic environments, illumination depends upon the water's optical properties and depth, both of which can change due to anthropogenic impacts: turbidity is increasing in many aquatic habitats, and many species have shifted deeper in response to warming surface waters (known as bathymetric shifts). Although increasing turbidity and bathymetric shifts can result in similarly large changes to a species' optical environment, no studies have yet examined the impact of the latter on visually mediated interactions. Here, we examine a potential link between climate change and visual perception, with a focus on colour. We discuss (i) what is known about bathymetric shifts; (ii) how the impacts of bathymetric shifts on visual interactions may be distributed across species; (iii) which interactions might be affected; and (iv) the ways that animals have to respond to these changes. As warming continues and temperature fluctuations grow more extreme, many species may move into even deeper waters. There is thus a need for studies that examine how such shifts can affect an organism's visual world, interfere with behaviour, and impact fitness, population dynamics, and community structure.European Commissio

Does coevolution with a shared parasite drive hosts to partition their defences among species?

When mimicry imposes costs on models, selection may drive the model's phenotype to evolve away from its mimic. For example, brood parasitism often drives hosts to diversify in egg appearance among females within a species, making mimetic parasitic eggs easier to detect. However, when a single parasite species exploits multiple host species, parasitism could also drive host egg evolution away from other co-occurring hosts, to escape susceptibility to their respective mimics. This hypothesis predicts that sympatric hosts of the same parasite should partition egg phenotypic space (defined by egg colour, luminance and pattern) among species to avoid one another. We show that eggs of warbler species parasitized by the cuckoo finch Anomalospiza imberbis in Zambia partition phenotypic space much more distinctly than do eggs of sympatric but unparasitized warblers. Correspondingly, cuckoo finch host-races better match their own specialist host than other local host species. In the weaver family, parasitized by the diederik cuckoo Chrysococcyx caprius, by contrast, parasitized species were more closely related and overlapped extensively in phenotypic space; correspondingly, cuckoos did not match their own host better than others. These results suggest that coevolutionary arms races between hosts and parasites may be shaped by the wider community context in which they unfold.E.M.C. was funded by the Pomona College–Downing College Student Exchange Scholarship, and thanks Downing College, Cambridge. M.S. was supported by a BBSRC David Phillips Fellowship (BB/G022887/1). C.N.S. was supported by a Royal Society Dorothy Hodgkin Fellowship and BBSRC David Phillips Fellowship (BB/J014109/1) and the DST-NRF Centre of Excellence at the FitzPatrick Institute

Sex differences in behavioural and anatomical estimates of visual acuity in the green swordtail Xiphophorus helleri

This is the author accepted manuscript. The final version is available on open access from the Company of Biologists via the DOI in this recordData availability: All data and codes underlying the analyses in this paper have been uploaded to the Dryad data repositoryAmong fishes in the family Poeciliidae, signals such as colour patterns, ornaments, and courtship displays play important roles in mate choice and male-male competition. Despite this, visual capabilities in Poeciliids are understudied, in particular visual acuity, the ability to resolve detail. We used three methods to quantify visual acuity in male and female green swordtails (Xiphophorus helleri), a species in which body size and the length of the male’s extended caudal fin (‘sword’) serve as assessment signals during mate choice and agonistic encounters. Topographic distribution of retinal ganglion cells (RGC) was similar in all individuals and characterized by areas of high cell densities located centro-temporally and nasally, as well as a weak horizontal streak. Based on the peak density of RGC in the centro-temporal area, anatomical acuity was estimated to be approximately 3 cycles/degree (cpd) in both sexes. However, a behavioural optomotor assay found significantly lower mean acuity in males (0.8 cpd) than females (3.0 cpd), which was not explained by differences in eye size between males and females. An additional behavioural assay, in which we trained individuals to discriminate striped gratings from grey stimuli of the same mean luminance, also showed lower acuity in males (1-2 cpd) than females (2-3 cpd). Thus, although retinal anatomy predicts identical acuity in males and females, two behavioural assays found higher acuity in females than males, a sexual dimorphism which is rare outside of invertebrates. Overall, our results have implications for understanding how Poeciliids perceive visual signals during mate choice and agonistic encounters.European Union Horizon 2020Australian Research Council (ARC)Royal Societ

Ecological and morphological correlates of visual acuity in birds

This is the author accepted manuscript. The final version is available on open access from the Company of Biologists via the DOI in this record Data Availability: All data, codes, phylogenetic trees, and other files necessary to reproduce the analyses in this paper have been uploaded to the Dryad data repository: https://doi.org/10.5061/dryad.bzkh189g3Birds use their visual systems for important tasks, such as foraging and predator detection, that require them to resolve an image. However, visual acuity (the ability to perceive spatial detail) varies by two orders of magnitude across birds. Prior studies indicate that eye size and aspects of a species' ecology may drive variation in acuity, but these studies have been restricted to small numbers of species. We used a literature review to gather data on acuity measured either behaviorally or anatomically for 94 species from 38 families. We then examined how acuity varies in relation to (1) eye size, (2) habitat spatial complexity, (3) habitat light level, (4) diet composition, (5) prey mobility, and (6) foraging mode. A phylogenetically-controlled model including all of the above factors as predictors indicated that eye size and foraging mode are significant predictors of acuity. Examining each ecological variable in turn revealed that acuity is higher in species whose diet comprises vertebrates or scavenged food and whose foraging modes require resolving prey from farther away. Additionally, species that live in spatially-complex, vegetative habitats have lower acuity than expected for their eye sizes. Together, our results suggest that the need to detect important objects from far away-such as predators for species that live in open habitats, and food items for species that forage on vertebrate and scavenged prey-has likely been a key driver of higher acuity in some species, helping to elucidate how visual capabilities may be adapted to an animal's visual needs.European Union Horizon 2020Royal Societ

Comparison of categorical color perception in two estrildid finches

This is the final version. Available from the University of Chicago Press via the DOI in this recordData and Code Availability: Data and code supporting the results are archived in the Dryad Data Repository (https://doi.org/10.5061/dryad.stqjq2c1z; Caves et al. 2020).Sensory systems are predicted to be adapted to the perception of important stimuli, such as signals used in communication. Prior work has shown that female zebra finches perceive the carotenoid-based orange-red coloration of male beaks—a mate choice signal—categorically. Specifically, females exhibited an increased ability to discriminate between colors from opposite sides of a perceptual category boundary than equally different colors from the same side of the boundary. The Bengalese finch, an estrildid finch related to the zebra finch, is black, brown, and white, lacking carotenoid coloration. To explore the relationship between categorical color perception and signal use, we tested Bengalese finches using the same orange-red continuum as in zebra finches, and we also tested how both species discriminated among colors differing systematically in hue and brightness. Unlike in zebra finches, we found no evidence of categorical perception of an orange-red continuum in Bengalese finches. Instead, we found that the combination of chromatic distance (hue difference) and Michelson contrast (difference in brightness) strongly correlated with color discrimination ability on all tested color pairs in Bengalese finches. The pattern was different in zebra finches: this strong correlation held when discriminating between colors from different categories but not when discriminating between colors from within the same category. These experiments suggest that categorical perception is not a universal feature of avian—or even estrildid finch—vision. Our findings also provide further insights into the mechanism underlying categorical perception and are consistent with the hypothesis that categorical perception is adapted for signal perception.Duke University Office of the Provos

Variation in carotenoid-containing retinal oil droplets correlates with variation in perception of carotenoid coloration

This is the final version. Available on open access from Springer via the DOI in this recordData availability: Data have been provided as supplementary material and have been archived on the Duke University Data Repository: https://doi.org/10.7924/r4jw8dj9hCode availability: Codes have been provided as supplementary material and have been archived on the Duke University Data Repository: https://doi.org/10.7924/r4jw8dj9hIn the context of mate choice, males may vary continuously in their expression of assessment signals, typically reflecting information about variation in mate quality. Similarly, females may exhibit variation in mate preference, which could be due to differences in how individual females perceive signals. The extent to which perception varies across individuals, however, and whether differences in sensory physiology underlie perceptual differences is poorly understood. Carotenoid pigments create the orange-red coloration of many assessment signals, and they also play a role in color discrimination in many vertebrates via their presence in retinal oil droplets. Here, we link variation in oil droplet carotenoid concentration with the ability of female zebra finches (Taeniopygia guttata) to discriminate an orange-red color continuum that parallels variation in male beak color, a mate assessment signal. We have shown previously that zebra finch females perceive this color range categorically, meaning they label color stimuli from this continuum as belonging to two categories and exhibit better discrimination between colors from different categories as compared with equally different colors from within a category. We quantified behavioral color discrimination and R-type (red) cone oil droplet spectral absorption, a proxy for carotenoid concentration. Oil droplet absorption was strongly predictive of variation in behavioral color discrimination ability. In particular, higher carotenoid concentration in oil droplets correlated with increased discrimination of colors from different sides of the previously identified category boundary. These data show that differences in the sensory periphery can correlate with individual variation in perception of a signal-relevant color range.Duke University Office of the ProvostHuman Frontier Science Progra

Spin-Nematic Squeezed Vacuum in a Quantum Gas

Using squeezed states it is possible to surpass the standard quantum limit of measurement uncertainty by reducing the measurement uncertainty of one property at the expense of another complementary property. Squeezed states were first demonstrated in optical fields and later with ensembles of pseudo spin-1/2 atoms using non-linear atom-light interactions. Recently, collisional interactions in ultracold atomic gases have been used to generate a large degree of quadrature spin squeezing in two-component Bose condensates. For pseudo spin-1/2 systems, the complementary properties are the different components of the total spin vector , which fully characterize the state on an SU(2) Bloch sphere. Here, we measure squeezing in a spin-1 Bose condensate, an SU(3) system, which requires measurement of the rank-2 nematic or quadrupole tensor as well to fully characterize the state. Following a quench through a nematic to ferromagnetic quantum phase transition, squeezing is observed in the variance of the quadratures up to -8.3(-0.7 +0.6) dB (-10.3(-0.9 +0.7) dB corrected for detection noise) below the standard quantum limit. This spin-nematic squeezing is observed for negligible occupation of the squeezed modes and is analogous to optical two-mode vacuum squeezing. This work has potential applications to continuous variable quantum information and quantum-enhanced magnetometry

Resolving photon number states in a superconducting circuit

Electromagnetic signals are always composed of photons, though in the circuit domain those signals are carried as voltages and currents on wires, and the discreteness of the photon's energy is usually not evident. However, by coupling a superconducting qubit to signals on a microwave transmission line, it is possible to construct an integrated circuit where the presence or absence of even a single photon can have a dramatic effect. This system is called circuit quantum electrodynamics (QED) because it is the circuit equivalent of the atom-photon interaction in cavity QED. Previously, circuit QED devices were shown to reach the resonant strong coupling regime, where a single qubit can absorb and re-emit a single photon many times. Here, we report a circuit QED experiment which achieves the strong dispersive limit, a new regime of cavity QED in which a single photon has a large effect on the qubit or atom without ever being absorbed. The hallmark of this strong dispersive regime is that the qubit transition can be resolved into a separate spectral line for each photon number state of the microwave field. The strength of each line is a measure of the probability to find the corresponding photon number in the cavity. This effect has been used to distinguish between coherent and thermal fields and could be used to create a photon statistics analyzer. Since no photons are absorbed by this process, one should be able to generate non-classical states of light by measurement and perform qubit-photon conditional logic, the basis of a logic bus for a quantum computer.Comment: 6 pages, 4 figures, hi-res version at http://www.eng.yale.edu/rslab/papers/numbersplitting_hires.pd

Construction, Concentration, and (Dis)Continuities in Social Valuations

I review and integrate recent sociological research that makes progress on three interrelated questions pertaining to social valuation: (a) the degree of social construction relative to objective constraints; (b) the degree of concentration in social valuations at a single point in time; and (c) the conditions that govern two broad forms of temporal discontinuity—(i) fashion cycles, especially in cultural expression and in managerial practices, and (ii) bubble/crash dynamics, as witnessed in such domains as authoritarian regimes and financial markets. In the course of the review, I argue for the importance of identifying how objective conditions constrain social construction and suggest two contrarian mechanisms by which this is accomplished—valuation opportunism and valuation entrepreneurship—and the conditions under which they are more or less effective

Diffusion patterns of new anti-diabetic drugs into hospitals in Taiwan: the case of Thiazolidinediones for diabetes

<p>Abstract</p> <p>Background</p> <p>Diffusion of new drugs in the health care market affects patients' access to new treatment options and health care expenditures. We examined how a new drug class for diabetes mellitus, thiazolidinediones (TZDs), diffused in the health care market in Taiwan.</p> <p>Methods</p> <p>Assuming that monthly hospital prescriptions of TZDs could serve as a micro-market to perform drug penetration studies, we retrieved monthly TZD prescription data for 580 hospitals in Taiwan from Taiwan's National Health Insurance Research Database for the period between March 1, 2001 and December 31, 2005. Three diffusion parameters, time to adoption, speed of penetration (monthly growth on prescriptions), and peak penetration (maximum monthly prescription) were evaluated. Cox proportional hazards model and quantile regressions were estimated for analyses on the diffusion parameters.</p> <p>Results</p> <p>Prior hospital-level pharmaceutical prescription concentration significantly deterred the adoption of the new drug class (HR: 0.02, 95%CI = 0.01 to 0.04). Adoption of TZDs was slower in district hospitals (HR = 0.43, 95%CI = 0.24 to 0.75) than medical centers and faster in non-profit hospitals than public hospitals (HR = 1.79, 95%CI = 1.23 to 2.61). Quantile regression showed that penetration speed was associated with a hospital's prior anti-diabetic prescriptions (25%Q: 18.29; 50%Q: 25.57; 75%Q: 30.97). Higher peaks were found in hospitals that had adopted TZD early (25%Q: -40.33; 50%Q: -38.65; 75%Q: -32.29) and in hospitals in which the drugs penetrated more quickly (25%Q: 16.53; 50%Q: 24.91; 75%Q: 31.50).</p> <p>Conclusions</p> <p>Medical centers began to prescribe TZDs earlier, and they prescribed more TZDs at a faster pace. The TZD diffusion patterns varied among hospitals depending accreditation level, ownership type, and prescription volume of Anti-diabetic drugs.</p