3 research outputs found

    Detection Of An Untyped Strain Of Bovine Respiratory Syncytial Virus In A Dairy Herd

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    Bovine respiratory syncytial virus (BRSV) causes important lower respiratory tract illness in calves. According to F and G proteins genetic sequences, three BRSV subgroups have been reported and characterized in several countries, showing differences in its distribution. In Brazil, the virus is widely disseminated throughout the herds and the few characterized isolates revealed the solely occurrence of the subgroup B. This study describes the detection and characterization of an untyped BRSV strain from a twenty-days-old calf from a herd without clinical respiratory disease. Nasal swabs were analyzed by RT-nested PCR for the F and G proteins genes. One sample has amplified the F protein gene. Sequencing and subsequent phylogenetic reconstruction were accomplished, revealing that the strain could not be grouped with any other BRSV subgroups reported. This result may suggest that the BRSV is in constantly evolution, even in Brazil, where the vaccination is not a common practice. More detailed studies about BRSV characterization are necessary to know the virus subgroups distribution among the Brazilian herds to recommend appropriated immunoprophylaxis.35525392550Affonso, I.B., Gatti, S.P., Alexandrino, B., Oliveira, M.C., Medeiros, A.S.R., Buzinaro, M.G., Samara, S.I., Detection of antibodies against bovine respiratory syncytial virus (BRSV) in dairy cattle with different prevalences of bovine herpesvirus type 1 (BHV-1) in São Paulo State, Brazil (2011) Semina: Ciências Agrárias, 32 (1), pp. 295-300. , LondrinaAlmeida, R.S., Domingues, H.G., Spilki, F.R., Larsen, L.E., Hagglund, S., Belák, S., Arns, C.W., Circulation of bovine respiratory syncytial virus in Brazil (2006) Veterinary Record, 158 (18), pp. 632-634. , LondonAlmeida, R.S., Spilki, F.R., Roehe, P.M., Arns, C.W., Detection of Brazilian bovine respiratory syncytial virus strain by a reverse transcriptase-nestedpolymerase chain reaction in experimentally infected calves (2005) Veterinary Microbiology, 105 (2), pp. 131-135. , AmsterdamArns, C.W., Campalans, J., Costa, S.C.B., Domingues, H.G., D'Arce, R.C.F., Almeida, R.S., Characterization of bovine respiratory syncytial virus isolated in Brazil (2003) Brazilian Journal of Medical and Biological Research, 36 (2), pp. 213-218. , Ribeirão PretoBaker, J.C., Frey, M., Bovine respiratory syncytial virus (1985) Veterinary Clinics of North America: Food Animal Practice, 1 (2), pp. 259-272. , PhiladelphiaBidokhti, M.R.M., Travén, M., Ohlson, A., Zarnegar, B., Baule, C., Belák, S., Alenius, S., Liu, L., Phylogenetic analysis of bovine respiratory syncytial viruses from recent outbreaks in feedlot and dairy cattle herds (2012) Archives of Virology, 157 (4), pp. 601-607. , New YorkBunt, A.A., Milne, R.G., Sayaya, T., Verbeek, M., Vetten, H.J., Walsh, J.A., Paramyxoviridae (2005) Virus Taxonomy, Eigth Report of the International Committee on Taxonomy of Viruses, pp. 655-671. , In: FAUQUET, C. M.MAYO, M. A.MANILOFF, J.DESSELBERGER, U.BALL, L. A. (Ed.). London: Elsevier: Academic PressCampalans, J., Arns, C.W., Serological evidence of bovine respiratory syncytial virus in Brazil (1997) Virus Reviews and Research, 2 (1-2), pp. 50-56. , Belo HorizonteDomingues, H.G., Spilki, F.R., Arns, C.W., Detecção molecular e análise filogenética de vírus respiratório sincicial bovino (BRSV) em swabs e tecido pulmonar de bovinos adultos (2011) Pesquisa Veterinária Brasileira, 31 (11), pp. 961-966. , Rio de JaneiroFurze, J.M., Roberts, S.R., Wertz, G.W., Taylor, G., Antigenically distinct G glycoproteins of BRSV strains share a high degree of genetic homogeneity (1997) Virology, 231 (1), pp. 48-58. , New YorkFurze, J., Wertz, G., Lerch, R., Taylor, G., Antigenic heterogeneity of the attachment protein of bovine respiratory syncytial virus (1994) Journal of General Virology, 75 (2), pp. 363-370. , LondonGonçalves, I.P.D., Simanke, A.T., Jost, H.C., Hötzel, I., Dal Soglio, A., Moojen, V., Detection of bovine respiratory syncytial virus in calves of Rio Grande do Sul, Brazil (1993) Ciência Rural, 23 (3), pp. 389-390. , Santa MariaHall, T.A., BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT (1999) Nucleic Acids Symposium Series, 41, pp. 95-98. , OxfordLarsen, L.E., Bovine respiratory syncytial virus (BRSV): A review (2000) Acta Veterinaria Scandinavica, 41 (1), pp. 1-24. , CopenhagenLarsen, L.E., Tjornehoj, K., Viuff, B., Extensive sequence divergence among bovine respiratory syncytial viruses isolated during recurrent outbreaks in closed herds (2000) Journal of Clinical Microbiology, 38 (11), pp. 4222-4227. , WashingtonNettleton, P.F., Gilray, J.A., Caldow, G., Gidlow, J.R., Durkovic, B., Vilcek, S., Recent isolates of Bovine respiratory syncytial virus from Britain are more closely related to isolates from USA than to earlier British and current mainland European isolates (2003) Journal of Veterinary Medicine Series B-Infectious Diseases and Veterinary Public Health, 50 (4), pp. 196-199. , BerlinProzzi, D., Walravens, K., Langedijk, J.P., Daus, F., Kramps, J.A., Letesson, J.J., Antigenic and molecular analyses of the variability of bovine respiratory syncytial virus G glycoprotein (1997) Journal of General Virology, 78 (2), pp. 359-366. , LondonSchrijver, R.S., Daus, F., Kramps, J.A., Langedijk, J.P.M., Buijs, R., Middel, W.G.J., Taylor, G., Van Oirschot, J.T., Subgrouping of bovine respiratory syncytial virus strains detected in lung tissue (1996) Veterinary Microbiology, 53 (3-4), pp. 253-260. , AmsterdamSchrijver, R.S., Langedijk, J.P.M., Poel, V.D.M.W.H., Middel, W.G.J., Kramps, J.A., Van Oirschot, J.T., Antibody responses against the G and F proteins of bovine respiratory syncytial virus after experimental and natural infections (1996) Clinical and Diagnostic Laboratory Immunology, 3 (5), pp. 500-506. , WashingtonSchrijver, R.S., Langedijk, J.P.M., Middel, W.G.J., Kramps, J.A., Rijsewijk, F.A.M., Van Oirschot, J.T., A bovine respiratory syncytial virus 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    Comparative Evaluation Of Conventional Rt-pcr And Real-time Rt-pcr (rrt-pcr) For Detection Of Avian Metapneumovirus Subtype A [comparação Entre As Técnicas De Rt-pcr Convencional E Rt-pcr Em Tempo Real Para A Detecção Do Metapneumovírus Aviários Subtipo A]

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    Avian metapneumovirus (AMPV) belongs to Metapneumovirus genus of Paramyxoviridae family. Virus isolation, serology, and detection of genomic RNA are used as diagnostic methods for AMPV. The aim of the present study was to compare the detection of six subgroup A AMPV isolates (AMPV/A) viral RNA by using different conventional and real time RT-PCR methods. Two new RT-PCR tests and two real time RT-PCR tests, both detecting fusion (F) gene and nucleocapsid (N) gene were compared with an established test for the attachment (G) gene. All the RT-PCR tested assays were able to detect the AMPV/A. The lower detection limits were observed using the N-, F- based RRT-PCR and F-based conventional RT-PCR (10 0.3 to 10 1 TCID 50 mL -1). The present study suggests that the conventional F-based RT-PCR presented similar detection limit when compared to N- and F-based RRT-PCR and they can be successfully used for AMPV/A detection.39514451451Arns, C.W., Hafez, M.H., (1992) Swollen Head Syndrome in Poultry Flocks in Brazil, pp. 81-84. , In: WESTERN POULTRY DISEASE CONFERENCE, 41., 1992, Sacramento, USA. Proceedings... Davis, CA: Conference & Event Services, University of CaliforniaBarik, S., Transcription of human respiratory syncytial virus genome RNA in vitro: Requirement of cellular factor(s) (1992) Journal of Virology, 66, pp. 6813-6818Bäyon-Auboyer, M.H., Comparison of F-, G- and N-based RT-PCR protocols with conventional virological procedures for the detection and typing of turkey rhinotracheitis virus (1999) Archives of Virology, 144 (6), pp. 1091-1109. , http://www.springerlink.com/content/vxcm8vulvfx3vmeh, Disponível em:, Doi: 10.1007/s007050050572Cecchinato, M., Design, validation, and absolute sensitivity of a novel test for the molecular detection of avian pneumovirus (2004) Journal of Veterinary Diagnostic Investigation, 16 (6), pp. 582-585Choi, J.H., Development of real-time PCR assays for detection and quantification of human bocavirus (2008) Journal of Clinical Microbiology, 42 (3), pp. 249-253. , http://www.journalofclinicalvirology.com/article/S1386-6532(08)00070-X, Disponível em:, Doi: 10.1016/j.jcv.2008.02.010Cook, J.K., Cavanagh, D., Detection and differentiation of avian pneumoviruses (metapneumoviruses) (2002) Avian Pathology, 31 (2), pp. 117-132D'arce, R.C., et al, Subtyping of new Brazilian avian metapneumovirus isolates from chickens and turkeys by reverse transcriptase-nested-polymerase chain reaction (2005) Avian Pathology, 34 (2), pp. 133-136Dani, M.A., Molecular characterization of Brazilian avian pneumovirus isolates: Comparison between immunochemiluminescent Southern blot and nested PCR (1999) Journal of Virological Methods, 79 (2), pp. 237-241. , http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B6T96-3WJDTS 6-D-7&_cdi=5106&_user=687304&_orig=search&_coverDate=05% 2F31%2F1999&_sk=999209997&view=c&wchp=dGLbVlW-zSkzS&md5= 6b42016b9f823422152fecdd9a0d7060&ie=, Disponível em:, Doi: 10.1016/S0166-0934(99)00020-8Fauquet, C.M., (2005) Virus taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses, p. 1162. , Amsterdam: Elsevier AcademicFerreira, H.L., Inhibition of avian metapneumovirus (AMPV) replication by RNA interference targeting nucleoprotein gene (N) in cultured cells (2007) Antiviral Research, 74 (1), pp. 77-81. , http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B6T2H-4MR1GV 1-1-1&_cdi=4919&_user=10&_orig=search&_coverDate=04%2F30 %2F2007&_sk=999259998&view=c&wchp=dGLzVtb-zSkWb&md5=a1d6 3aa0ca8ae7b4fa06307793e8edc5&ie=, Disponível em:, Doi: 10.1016/j.antiviral.2006.12.002Giraud, P., Turkey rhinotracheitis in France: Preliminary investigations on a ciliostatic virus (1986) Veterinary Record, 119 (24), pp. 606-607Gough, R.E., Avian pneumoviruses (2003) Diseases of Poultry, pp. 92-99. , In: SAIF, M. et al., Ames: Iowa StateGuionie, O., Laboratory evaluation of a quantitative real-time reverse transcription PCR assay for the detection and identification of the four subgroups of avian metapneumovirus (2007) Journal of Virological Methods, 139 (2), pp. 150-158. , http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B6T96-4MFJJ1 2-1-3&_cdi=5106&_user=10&_orig=search&_coverDate=02%2F28 %2F2007&_sk=998609997&view=c&wchp=dGLzVtz-zSkWz&md5=70a2 de1148e26bf618e402c54144d25e&ie=, Disponível em:, Doi: 10.1016/j.jviromet.2006.09.022Juhasz, K., Easton, A.J., Extensive sequence variation in the attachment (G) protein gene of avian pneumovirus: Evidence for two distinct subgroups (1994) Journal of General Virology, 75 (PART 11), pp. 2873-2880. , http://vir.sgmjournals.org/cgi/reprint/75/11/2873, Disponível em:, Doi: 10.1099/0022-1317-75-11-2873Keightley, M.C., Real-time NASBA detection of SARS-associated coronavirus and comparison with real-time reverse transcription-PCR (2005) Journal of Medical Virology, 77 (4), pp. 602-608. , http://www3.interscience.wiley.com/journal/112137449, Disponível em:, Doi: 10.1002/jmv.20498Loisy, F., Real-time RT-PCR for norovirus screening in shellfish (2005) Journal of Virological Methods, 123 (1), pp. 1-7Maertzdorf, J., Real-time reverse transcriptase PCR assay for detection of human metapneumoviruses from all known genetic lineages (2004) Journal of Clinical Microbiology, 42, pp. 981-986. , http://jcm.asm.org/cgi/reprint/42/3/981, Disponível em:, Doi: 10.1128/JCM.42.3.981-986.2004Otsuki, K., Demonstration of serum-neutralising antibody to turkey rhinotracheitis virus in serum from chicken flocks in Japan (1996) Journal of Veterinary Medical Science, 58 (9), pp. 869-874Pabbaraju, K., Diagnosis and epidemiological studies of human metapneumovirus using real-time PCR (2007) Journal of Clinical Virology, 40 (3), pp. 186-192. , http://www.journalofclinicalvirology.com/article/PIIS1386653207002740, Doi:10.1016/j.jcv.2007.08.004Reed, J.I., Muench, H., A simple method for estimating fifth percent endpoints (1938) American Journal Hygiene, 27, pp. 493-49

    Molecular Detection And Phylogenetic Analysis Of The Gene H From Canine Distemper Virus Isolates Circulating Atthe Municipality Of Campinas, São Paulo [detecção Molecular E Análise Filogenética Do Gene H De Amostras Do Vírus Da Cinomose Canina Em Circulação No Município De Campinas, São Paulo]

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    Canine distemper virus (CDV), a Morbillivirus of the family Paramyxoviridae, is the etiological agent of neurological and systemic disease in dogs. The laboratory diagnosis of infection requires viral isolation or detection of genetic material of the virus in secretions or tissues of dogs with clinical suspicion of the disease. The genetic diversity among isolates of CDV can be assessed by sequencing and phylogenetic analysis of the gene that encodes the viral hemagglutinin (H gene), and there is currently a special interest in comparing the strains currently circulating in the field with the genogroup America-1, which comprises strains present in vaccines available in the market. In this study, the molecular detection of CDV gene H was performed from biological samples harvested ante-and post-mortem from 15 dogs with clinical signs suggestive of canine distemper in the metropolitan region of Campinas, São Paulo. Ten of the 15 dogs examined had at least one positive organ under molecular detection and the obtained amplicons were sequenced and further analyzed by molecular phylogenetic analysis. Similarly to what has already been reported on previous studies regarding the diversity of the gene H in other countries, the phylogenetic reconstruction obtained for the samples of cases of distemper from Campinas region showed they were grouped with the North American, European and Japanese newly described samples, a genetic group distinguished from classical samples of CDV, named America-1, which encompasses the vaccine strains Snyder Hill, Onderstepoort and Lederle.3217277Amude, A.M., Alfieri, A.A., Alfieri, A.F., Antemortem diagnosis of CDV infection by RT-PCR in distemper dogs with neurological deficits without the typical clinical presentation (2006) Vet. Res. 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