An open and parallel multiresolution framework using block-based adaptive grids

A numerical approach for solving evolutionary partial differential equations in two and three space dimensions on block-based adaptive grids is presented. The numerical discretization is based on high-order, central finite-differences and explicit time integration. Grid refinement and coarsening are triggered by multiresolution analysis, i.e. thresholding of wavelet coefficients, which allow controlling the precision of the adaptive approximation of the solution with respect to uniform grid computations. The implementation of the scheme is fully parallel using MPI with a hybrid data structure. Load balancing relies on space filling curves techniques. Validation tests for 2D advection equations allow to assess the precision and performance of the developed code. Computations of the compressible Navier-Stokes equations for a temporally developing 2D mixing layer illustrate the properties of the code for nonlinear multi-scale problems. The code is open source

Cork - a natural material for linalool controlled release

Controlled release of aromatic mixtures to the atmosphere is a requirement for scented systems for indoor applications. The product must smell nice, but also be able to last, slowly releasing the perfume over time. Several adsorption materials have been used, for this purpose. In this study, cork was investigated as a potential perfume adsorbent for application in scented drawer sachets and equivalent products. Cork was selected due to its adsorption properties and because it is a natural, renewable, sustainable material. Granulated cork is a significant by‐product in cork industries and it was chosen for adsorption in this work. Linalool, an enantiomeric monoterpene alcohol and one of the main components of several essential oils, was selected as the model compound for adsorption studies. Activated carbon (AC) was used as the reference material. The sorption of linalool to granulated cork and AC was evaluated by HS‐SPME‐GC‐FID. The linalool isotherm on cork was shown to follow a Brunauer‐Deming‐Deming and Teller, Type IV model. The isotherm data on AC can be adjusted to Langmuir and Freundlich models. A maximum adsorption capacity of 3.9x103μg/g was achieved for AC. Desorption studies were performed. Linalool was still released from granulated cork after three equilibrium stages of desorption, whereas only two desorption values were obtained for AC from the equilibrium with highest linalool concentration. Thus, AC demonstrated good adsorption but not good desorption properties. Sorption and desorption studies of linalool from granulated cork, showed that granulated cork could be an excellent material allowing controlled release of the aroma.info:eu-repo/semantics/publishedVersio

Grid structure impact in sparse point representation of derivatives

In the Sparse Point Representation (SPR) method the principle is to retain the function data indicated by significant interpolatory wavelet coefficients, which are defined as interpolation errors by means of an interpolating subdivision scheme. Typically, a SPR grid is coarse in smooth regions, and refined close to irregularities. Furthermore, the computation of partial derivatives of a function from the information of its SPR content is performed in two steps. The first one is a refinement procedure to extend the SPR by the inclusion of new interpolated point values in a security zone. Then, for points in the refined grid, such derivatives are approximated by uniform finite differences, using a step size proportional to each point local scale. If required neighboring stencils are not present in the grid, the corresponding missing point values are approximated from coarser scales using the interpolating subdivision scheme. Using the cubic interpolation subdivision scheme, we demonstrate that such adaptive finite differences can be formulated in terms of a collocation scheme based on the wavelet expansion associated to the SPR. For this purpose, we prove some results concerning the local behavior of such wavelet reconstruction operators, which stand for SPR grids having appropriate structures. This statement implies that the adaptive finite difference scheme and the one using the step size of the finest level produce the same result at SPR grid points. Consequently, in addition to the refinement strategy, our analysis indicates that some care must be taken concerning the grid structure, in order to keep the truncation error under a certain accuracy limit. Illustrating results are presented for 2D Maxwell's equation numerical solutions

Transcriptoma de frutos de Coffea arabica L. ao longo do seu desenvolvimento inicial.

Neste trabalho foi realizado o seqüenciamento de RNA em larga escala de 12 bibliotecas de Coffea arabica cv. IAPAR59: folha, flor, frutos ao longo do seu desenvolvimento e frutos tratados com o indutor de metabolismo secundário metiljasmonato. Foram gerados no total 84.798.835 sequências (Illumina, HiSeq2000), que foram montadas em 127.600 contigs com tamanho médio de 1264bp, dos quais 65480 foram considerados como variantes de splicing únicos (unigenes). Neste trabalho, reportamos a montagem de novo do transcriptoma realizada com as sequências destas bibliotecas e os dados preliminares de anotação funcional e categorização. Trata-se do primeiro trabalho de sequenciamento Illumina com frutos de cafeeiro, que pode trazer importantes informações sobre genes candidatos relacionados a produção de compostos-chave envolvidos na qualidade do café e maturação de frutos

Padrões micrometeorológicos da plantação de cana-de-açúcar.

A indústria do etanol e açúcar cresceu como uma atividade agrícola muito relevante no Brasil, especialmente no estado de São Paulo. Entender a variabilidade temporal de troca de água e calor sobre plantações de cana-de-açúcar tornou-se um assunto bastante importante no contexto de mudanças climáticas regionais e globais. Este trabalho pretende discutir a variabilidade dos fluxos de radiação e fluxos turbulentos de energia sobre 3 tipos de manejo de plantação de cana-de-açúcar, no estado de São Paulo, entre 1997 e 2007. Os agroecossistemas foram manejados com diferentes sistemas de colheita e com diferenças de solo entre dois deles. A variabilidade dos fluxos dependeu em primeiro lugar da variabilidade climática sazonal, e finalmente notou-se a caracterização de padrões que refletiram o tipo de manejo e por conseguinte os diferentes estágios fenológicos das plantas em cada um deles