agro biodiversity spatial assessment and genetic reserve delineation for the pollino national park italy

Ancient fruit trees, grape vines, traditional crop and garden cultivars have been inventoried in Pollino National Park by adopting a spatial sampling grid which covers 23 different municipalities (~1500 Km2) and 190 surveyed sites. Each site is a circle with a visible radius of 200 - 250 m. The spatial analysis of the diversity of plant genetic resources has been conducted with pre-fixed landscape units (size: 4 Km × 4 Km). Overall, 49 different woody long cycle (455 ancient cultivars) and 53 short cycle species (102 ancient cultivars) have been scored. Long cycle species exhibit higher cultivar richness than short cycle species. The analysis has recognized that pre-Columbian indigenous cultivars had not been displaced by the American species introduced after the 16th century. In addition, it is confirmed that small-scale poly-production, under conditions of spatial niche variation, is associated to high species and cultivar richness. The mapped realized niche, for both pre- and post-Columbian genetic resources, includes the actual genetic reserve suitable for in situ conservation of plant agro-biodiversity. Agro-biodiversity models, drivers of genetic erosion, and realistic responses to genetic erosion are outlined

Nano-particle characterization by using Exposure Time Dependent Spectrum and scattering in the near field methods: how to get fast dynamics with low-speed CCD camera

Light scattering detection in the near field, a rapidly expanding family of scattering techniques, has recently proved to be an appropriate procedure for performing dynamic measurements. Here we report an innovative algorithm, based on the evaluation of the Exposure Time Dependent Spectrum (ETDS), which makes it possible to measure the fast dynamics of a colloidal suspension with the aid of a simple near field scattering apparatus and a CCD camera. Our algorithm consists in acquiring static spectra in the near field at different exposure times, so that the measured decay times are limited only by the exposure time of the camera and not by its frame rate. The experimental set-up is based on a modified microscope, where the light scattered in the near field is collected by a commercial objective, but (unlike in standard microscopes) the light source is a He-Ne laser which increases the instrument sensitivity. The apparatus and the algorithm have been validated by considering model systems of standard spherical nano-particle

The Longevity of Fruit Trees in Basilicata (Southern Italy): Implications for Agricultural Biodiversity Conservation

In the Mediterranean basin, agriculture and other forms of human land use have shaped the environment since ancient times. Intensive and extensive agricultural systems managed with a few cultured plant populations of improved varieties are a widespread reality in many Mediterranean countries. Despite this, historical cultural landscapes still exist in interior and less intensively managed rural areas. There, ancient fruit tree varieties have survived modern cultivation systems, preserving a unique genetic heritage. In this study, we mapped and characterized 106 living fruit trees of ancient varieties in the Basilicata region of southern Italy. Tree ages were determined through tree ring measurements and radiocarbon analyses. We uncovered some of the oldest scientifically dated fruit trees in the world. The oldest fruit species were olive (max age 680 +/- 57 years), mulberry (647 +/- 66 years), chestnut (636 +/- 66 years), and pear (467 +/- 89 years). These patriarchs hold a unique genetic resource; their preservation and genetic maintenance through agamic propagation are now promoted by the Lucan Agency for the Development and Innovation in Agriculture (ALSIA). Each tree also represents a hub for biodiversity conservation in agrarian ecosystems: their large architecture and time persistence guarantee ecological niches and micro-habitats suitable for flora and fauna species of conservation significance

Sweet Cherry Diversity and Relationships in Modern and Local Varieties Based on SNP Markers

The sweet cherry is an important fruit species that is widespread globally. In addition to the well-known traditional and modern varieties, a myriad of landraces is present in Europe, as well as in southern Italy. This study aims to evaluate the population structure, genetic relationships, and cases of duplicate samples in a collection of 143 accessions using GBS-derived SNP markers. The genetic material under investigation includes modern commercial varieties, ancient European and American varieties, landraces, and individuals retrieved from small orchards. Some of the known varieties were genetically analyzed here for the first time. In addition, several genotypes were collected from the Basilicata region (southern Italy), an area largely unexplored for sweet cherry genetic resources. The relationships among genotypes were assessed using four different methods: allele frequency and ancestry estimation, principal component analysis, Neighbor-Joining tree, and identity-by-state estimation. The analyses returned quite congruent results and highlighted the presence of four main genetic groups, namely: (i) American varieties, (ii) the ‘Germersdorfer-Ferrovia’ cluster, (iii) the ‘Burlat’ group, and (iv) the group of Italian landraces. The main drivers of clustering were ancestry, geographical distribution, and some important traits such as self-compatibility. The sweet cherries from Basilicata, herewith examined for the first time, were mostly distributed within the group of Italian landraces, being particularly linked to the autochthonous varieties of the Campania region. However, some genotypes were outside this group, thus suggesting the introduction of genetic material from other Italian regions or from European countries. The considerable amount of American and European modern varieties analyzed are genetically very closely related, suggesting a reduced genetic basis. In addition, we highlighted the discriminating ability of SNP markers to distinguish between an original variety and its mutant. Overall, our results may be useful in defining conservation strategies for sweet cherry germplasm and developing future breeding programs to enlarge the genetic basis of commercial varieties

Evolutionary Participatory Selection for Organic Heterogeneous Material: A Case Study with Ox-Heart Tomato in Italy

Cultivars specifically adapted to organic agriculture are lacking in most crops, and tomato is no exception. Evolutionary-participatory breeding (EPB) combines the adaptive ability of evolutionary populations with farmers’ selection, thus representing a cost-effective strategy for the development of novel organic heterogeneous material, as introduced by the European regulation on organic agriculture (EU) 2018/848. An F4 ox-heart tomato composite cross population (CCP), derived from a half-diallel cross of four local varieties chosen for their superior performance under organic conditions, was submitted to both natural and farmers’ selection on three organic farms and at one research station in Italy. During field days held at each location before harvest, farmers visually scored 400 plants, all of which were carried forward to develop the natural selection (NS) population, while the 20 best ranking plants were chosen to develop the farmers’ selection (FS). After two cycles of selection (2018 and 2019), one NS and one FS population were obtained at each location. After this two-year selection process, in 2020, the eight populations (four NS and four FS), were evaluated in a randomised complete block trial in the four locations of selection and evolution. Four local varieties chosen by farmers and two modern varieties (one open pollinated variety and one F1 hybrid) were added as controls. The ANOVA showed significant differences among entries for all traits. Entry-by-location interactions were larger than the genetic effect for the overall evaluation, yield at first harvest, total yield and percentage of marketable yield. This confirms the importance of decentralising selection when seeking to develop specifically adapted varieties and/or populations. Evidence was observed of the effectiveness of participatory selection for improving the yield at first harvest, with a slight trade-off effect for the total yield and plant vigour

Evolutionary Participatory Selection for Organic Heterogeneous Material: A Case Study with Ox-Heart Tomato in Italy

Cultivars specifically adapted to organic agriculture are lacking in most crops, and tomato is no exception. Evolutionary-participatory breeding (EPB) combines the adaptive ability of evolutionary populations with farmers’ selection, thus representing a cost-effective strategy for the development of novel organic heterogeneous material, as introduced by the European regulation on organic agriculture (EU) 2018/848. An F4 ox-heart tomato composite cross population (CCP), derived from a half-diallel cross of four local varieties chosen for their superior performance under organic conditions, was submitted to both natural and farmers’ selection on three organic farms and at one research station in Italy. During field days held at each location before harvest, farmers visually scored 400 plants, all of which were carried forward to develop the natural selection (NS) population, while the 20 best ranking plants were chosen to develop the farmers’ selection (FS). After two cycles of selection (2018 and 2019), one NS and one FS population were obtained at each location. After this two-year selection process, in 2020, the eight populations (four NS and four FS), were evaluated in a randomised complete block trial in the four locations of selection and evolution. Four local varieties chosen by farmers and two modern varieties (one open pollinated variety and one F1 hybrid) were added as controls. The ANOVA showed significant differences among entries for all traits. Entry-by-location interactions were larger than the genetic effect for the overall evaluation, yield at first harvest, total yield and percentage of marketable yield. This confirms the importance of decentralising selection when seeking to develop specifically adapted varieties and/or populations. Evidence was observed of the effectiveness of participatory selection for improving the yield at first harvest, with a slight trade-off effect for the total yield and plant vigour