An Interdependent Metabolic Patchwork in the Nested Symbiosis of Mealybugs

SummaryHighly reduced genomes of 144–416 kilobases have been described from nutrient-provisioning bacterial symbionts of several insect lineages [1–5]. Some host insects have formed stable associations with pairs of bacterial symbionts that live in specialized cells and provide them with essential nutrients; genomic data from these systems have revealed remarkable levels of metabolic complementarity between the symbiont pairs [3, 4, 6, 7]. The mealybug Planococcus citri (Hemiptera: Pseudococcidae) contains dual bacterial symbionts existing with an unprecedented organization: an unnamed gammaproteobacteria, for which we propose the name Candidatus Moranella endobia, lives inside the betaproteobacteria Candidatus Tremblaya princeps [8]. Here we describe the complete genomes and metabolic contributions of these unusual nested symbionts. We show that whereas there is little overlap in retained genes involved in nutrient production between symbionts, several essential amino acid pathways in the mealybug assemblage require a patchwork of interspersed gene products from Tremblaya, Moranella, and possibly P. citri. Furthermore, although Tremblaya has the smallest cellular genome yet described, it contains a genomic inversion present in both orientations in individual insects, starkly contrasting with the extreme structural stability typical of highly reduced bacterial genomes [4, 9, 10]

Analysis of ground-based differential imager performance

In the context of extrasolar planet direct detection, we evaluated the performance of differential imaging with ground-based telescopes. This study was carried out in the framework of the VLT-Planet Finder project and is further extended to the case of Extremely Large Telescopes. Our analysis is providing critical specifications for future instruments mostly in terms of phase aberrations but also regarding alignments of the instrument optics or offset pointing on the coronagraph. It is found that Planet Finder projects on 8m class telescopes can be successful at detecting Extrasolar Giant Planets providing phase aberrations, alignments and pointing are accurately controlled. The situation is more pessimistic for the detection of terrestrial planets with Extremely Large Telescopes for which phase aberrations must be lowered at a very challenging level

Laboratory validation of the dual-zone phase mask coronagraph in broadband light at the high-contrast imaging THD-testbed

Specific high contrast imaging instruments are mandatory to characterize circumstellar disks and exoplanets around nearby stars. Coronagraphs are commonly used in these facilities to reject the diffracted light of an observed star and enable the direct imaging and spectroscopy of its circumstellar environment. One important property of the coronagraph is to be able to work in broadband light. Among several proposed coronagraphs, the dual-zone phase mask coronagraph is a promising solution for starlight rejection in broadband light. In this paper, we perform the first validation of this concept in laboratory. First, we recall the principle of the dual-zone phase mask coronagraph. Then, we describe the high-contrast imaging THD testbed, the manufacturing of the components and the quality-control procedures. Finally, we study the sensitivity of our coronagraph to low-order aberrations (inner working angle and defocus) and estimate its contrast performance. Our experimental broadband light results are compared with numerical simulations to check agreement with the performance predictions. With the manufactured prototype and using a dark hole technique based on the self-coherent camera, we obtain contrast levels down to $2\,10^{-8}$ between 5 and 17$\,\lambda_0/D$ in monochromatic light (640 nm). We also reach contrast levels of $4\,10^{-8}$ between 7 and 17$\lambda_0/D$ in broadband ($\lambda_0=675$ nm, $\Delta\lambda=250$ nm and $\Delta\lambda / \lambda_0 = 40$ %), which demonstrates the excellent chromatic performance of the dual-zone phase mask coronagraph. The performance reached by the dual-zone phase mask coronagraph is promising for future high-contrast imaging instruments that aim at detecting and spectrally characterizing old or light gaseous planets.Comment: 9 pages, 16 figure

The Geological Record and Phylogeny of Spider Wasps (Hymenoptera: Pompilidae): A Revision of Fossil Species and Their Phylogenetic Placement

Accurate fossil identification has become increasingly relevant with the widespread use of phylogenetic divergence time estimation methods, which rely on fossil data to determine clade hard-minimum ages. Here we revise, diagnose and illustrate known spider wasp (Hymenoptera: Pompilidae) fossil species and place them within the latest Pompilidae phylogenetic hypothesis. Ceropalites infelix Cockerell, from the Florissant Fossil Beds (Priabonian), is no longer recognized as Pompilidae, but as Aulacidae. Agenioideus saxigenus (Cockerell) comb. nov., Deuteragenia wettweri (Statz) comb. nov., Caputelus scudderi (Cockerell, 1906) comb. nov., Pepsinites avitula (Cockerell, 1941) comb. nov., Pepsinites contentus (Theobald, 1937) comb. nov., Pepsinites florissantensis (Cockerell, 1906) comb. nov., Pepsinites laminarum (Rohwer, 1909) comb. nov., Pepsinites scelerosus (Meunier, 1919) comb. nov., Pepsinites cockerellae(Rohwer, 1909) comb. nov., Pompilinites coquandi (Theobald, 1937) comb. nov., Pompilinites depressus (Statz, 1936) comb. nov., Pompilites incertus (Theobald, 1937) comb. nov.,Pompilites induratus (Heer, 1849) comb. nov., Pompilites fasciatus (Theobald, 1937) comb. nov., and Pompilites senex comb. nov. are new combinations. Twenty-three fossil species of spider wasps are now recognized in 13 genera. Four new genera are proposed: CaputelusWaichert & Pitts gen. nov., Pompilites Rodriguez gen. nov., Pompilinites Rodriguez & Waichert gen. nov., and Pepsinites Rodriguez & Waichert gen. nov., of which the three latter are collective-group names for fossils with taxonomic uncertainty. One species of fossil spider wasp is described: Deuteragenia catalunyia Rodriguez, Waichert & Pitts sp. nov., from the Bellver deposits in Catalonia, Spain. Five of the 23 known species can be used to determine hard-minimum age for calibrations of genera stem-groups (Agenioideus, Anoplius, Cryptocheilus, Deuteragenia, Priocnemis). The fossil belonging to the stem-group of the tribe Ageniellini (Chubutholites) is not recommended for calibration because of the high uncertainty in its age and taxonomy. The remaining taxa can be assigned to the lineage comprising Pompilinae + Pepsinae (12 species) or crown-group Pompilidae (four species)

Partnering With a Pest: Genomes of Hemlock Woolly Adelgid Symbionts Reveal Atypical Nutritional Provisioning Patterns in Dual-Obligate Bacteria

Nutritional bacterial symbionts enhance the diets of sap-feeding insects with amino acids and vitamins missing from their diets. In many lineages, an ancestral senior symbiont is joined by a younger junior symbiont. To date, an emergent pattern is that senior symbionts supply a majority of amino acids, and junior symbionts supply a minority. Similar to other hemipterans, adelgids harbor obligate symbionts, but have higher diversity of bacterial associates, suggesting a history of symbiont turnover. The metabolic roles of dual symbionts in adelgids and their contributions to the consortium are largely unexplored. Here, we investigate the symbionts of Adelges tsugae, the hemlock woolly adelgid (HWA), an invasive species introduced from Japan to the eastern United States, where it kills hemlock trees. The response of hemlocks to HWA feeding has aspects of a defensive reaction against pathogens, and some have speculated that symbionts may be involved. We sequenced the genomes of “Ca. Annandia adelgestsuga” and “Ca. Pseudomonas adelgestsugas” symbionts to detail their metabolic capabilities, infer ages of relationship, and search for effectors of plant defenses. We also tested the relationship of “Ca. Annandia” to symbionts of other insects. We find that both symbionts provide nutrients, but in more balanced proportions than dual symbionts of other hemipterans. The lesser contributions of the senior “Ca. Annandia” support our hypothesis for symbiont replacements in adelgids. Phylogenomic results were ambiguous regarding the position of “Ca. Annandia”. We found no obvious effectors of plant defenses related to insect virulence, but hypothetical proteins in symbionts are unknown players

Molecular phylogeny and systematics of spider wasps (Hymenoptera: Pompilidae): Redefining subfamily boundaries and the origin of the family

Spider wasps (Hymenoptera: Pompilidae) constitute a monophyletic family supported by numerous morphological and behavioural traits. The subfamilial and tribal classifications, however, have a history of conflicting and confusing designations and nomenclature. Here, we reconstruct a molecular phylogeny of Pompilidae from Bayesian and maximum-likelihood analyses of four nuclear molecular markers (elongation factor-1 ë± F2 copy, long-wavelength rhodopsin, RNA polymerase II, and 28S ribosomal RNA). A Bayesian divergence-time estimation analysis was performed using four calibration points and an ancestral-area reconstruction was performed with a Bayesian binary Markov chain Monte Carlo method. New relationships are recovered, and new subfamilial delimitations are proposed and discussed based on the phylogeny. The origin of Pompilidae was c.43.3 Mya, probably in the Nearctic region. Most of the extant subfamilies originated from the late Eocene to the Oligocene, and their current distributions are the product of various dispersal events that occurred over the course of ‰ö_40 Mya. This is the first phylogenetic reconstruction of Pompilidae from molecular characters, with broad geographical and taxonomic sampling. The following subfamilies and relationships are recognized: Ctenocerinae+((Ceropalinae+Notocyphinae)+(Pompilinae+Pepsinae)). We revalidate Notocyphinae, which contains only Notocyphus, and define a new tribe in Pompilinae: Sericopompilini. Priochilini is reinstated. Sericopompilini contains Sericopompilus as the sole representative; Priochilini contains Priochilus and Balboana. Epipompilus and Chirodamus are now classified as Pepsinae. å© 2015 The Linnean Society of London

Calibration of quasi-static aberrations in exoplanet direct-imaging instruments with a Zernike phase-mask sensor. II. Concept validation with ZELDA on VLT/SPHERE

Warm or massive gas giant planets, brown dwarfs, and debris disks around nearby stars are now routinely observed by dedicated high-contrast imaging instruments on large, ground-based observatories. These facilities include extreme adaptive optics (ExAO) and state-of-the-art coronagraphy to achieve unprecedented sensitivities for exoplanet detection and spectral characterization. However, differential aberrations between the ExAO sensing path and the science path represent a critical limitation for the detection of giant planets with a contrast lower than a few $10^{-6}$ at very small separations (<0.3\as) from their host star. In our previous work, we proposed a wavefront sensor based on Zernike phase contrast methods to circumvent this issue and measure these quasi-static aberrations at a nanometric level. We present the design, manufacturing and testing of ZELDA, a prototype that was installed on VLT/SPHERE during its reintegration in Chile. Using the internal light source of the instrument, we performed measurements in the presence of Zernike or Fourier modes introduced with the deformable mirror. Our experimental and simulation results are consistent, confirming the ability of our sensor to measure small aberrations (<50 nm rms) with nanometric accuracy. We then corrected the long-lived non-common path aberrations in SPHERE based on ZELDA measurements. We estimated a contrast gain of 10 in the coronagraphic image at 0.2\as, reaching the raw contrast limit set by the coronagraph in the instrument. The simplicity of the design and its phase reconstruction algorithm makes ZELDA an excellent candidate for the on-line measurements of quasi-static aberrations during the observations. The implementation of a ZELDA-based sensing path on the current and future facilities (ELTs, future space missions) could ease the observation of the cold gaseous or massive rocky planets around nearby stars.Comment: 13 pages, 12 figures, A&A accepted on June 3rd, 2016. v2 after language editin

Calibration of <i>Herschel</i> SPIRE FTS observations at different spectral resolutions

The SPIRE Fourier Transform Spectrometer on-board the Herschel Space Observatory had two standard spectral resolution modes for science observations: high resolution (HR) and low resolution (LR), which could also be performed in sequence (H+LR). A comparison of the HR and LR resolution spectra taken in this sequential mode revealed a systematic discrepancy in the continuum level. Analysing the data at different stages during standard pipeline processing demonstrates that the telescope and instrument emission affect HR and H+LR observations in a systematically different way. The origin of this difference is found to lie in the variation of both the telescope and instrument response functions, while it is triggered by fast variation of the instrument temperatures. As it is not possible to trace the evolution of the response functions using housekeeping data from the instrument subsystems, the calibration cannot be corrected analytically. Therefore, an empirical correction for LR spectra has been developed, which removes the systematic noise introduced by the variation of the response functions