Production of pectinase enzyme from aspergillus sojae batch and fed-batch systems

Thesis (Master)--Izmir Institute of Technology, Biotechnology, Izmir, 2008Includes bibliographical references (leaves: 57-60)Text in English; Abstract: Turkish and Englishx, 74 leavesCommercial preparations of pectinases derived from fungi are well known to have high biotechnological value in the industry. For this purpose, polymethylgalacturonase (PMG) and polygalacturonase (PG) were produced with high productivities by Aspergillus sojae ATCC 20235 by using low cost carbon (Maltrin) and nitrogen (Corn Steep Liquor, CSL) sources. There is no literature report to best of our knowledge on the fed-batch production, purification and characterization of polygalacturonase using this microorganism.In this study batch fermentation was carried out in order to obtain the crude PG and to establish a baseline for the forth coming fed-batch experiments. The crude PG was partially purified using three-phase partitioning as an emerging bioseparation technique and characterized with respect to its biochemical and thermal properties. These studies showed that this enzyme holds a great potential to be a good candidate for various industrial applications. To optimize fed-batch fermentation conditions, response surface methodology (RSM) was performed using face-centered central composite design. As a result, maximum PG activity (20.61 U/ml) and maximum biomass (34.23 g/l) were obtained at high maltrin (150 g/l) and high CSL (10 g/l) concentrations when the repeated feeding was done at 48th and 72nd hours. Maximum PMG activity (16.76 U/ml) was also achieved at higher maltrin and higher CSL concentrations at a feeding time of 72nd hours. Fed-batch fermentation has been successfully used to increase PG (33.74%) and PMG (23.96%) activities from Aspergillus sojae. Finally, agar diffusion method was adapted as a rapid method for the selection of high pectinase producer in the strain improvement study

Characterization of three-phase partitioned exo-polygalacturonase from Aspergillus sojae with unique properties

Exo-polygalacturonase enzyme produced by Aspergillus sojae ATCC 20235 was purified using three-phase partitioning (TPP), an emerging bio-separation technique where a single step as compared to the classical multi-step purification was used. Using this technique, crude enzyme solution (pH 6.6) saturated to 30% (w/v) with ammonium sulphate and with a crude extract to tert-butanol ratio of 1:1 (v/v) at 25 °C resulted in 25.5% recovery of exo-polygalacturonase with a 6.7-fold purification. The purified enzyme was characterized with respect to its activity and stability at various pH and temperature ranges. Optimum pH and temperature for maximum activity were determined as pH 4 and 55 °C. The enzyme was stable at both acidic and alkaline pH for 2 h at 30 °C. The thermal stability study showed that the purified enzyme had an inactivation energy of 68.41 kcal/mol and a half-life (t1/2) value of 3.6 h at 75 °C presenting a large thermal stability. The kinetic constants Km and Vmax using polygalacturonic acid as substrate were 0.75 g l-1 and 1.14 μmol min-1, respectively. SDS-PAGE profiling revealed that the purified exo-polygalacturonase had two bands with the molecular weights of 36 and 53 kDa. The enzyme was completely inhibited in the presence of Mn2+ and SDS and induced significantly by EDTA, glycerol and β-mercaptoethanol.Izmir Institute of Technolog

Biochemical and thermal characterization of crude exo-polygalacturonase produced by Aspergillus sojae

Crude exo-polygalacturonase enzyme (produced by Aspergillus sojae), significant for industrial processes, was characterized with respect to its biochemical and thermal properties. The optimum pH and temperature for maximum crude exo-polygalacturonase activity were pH 5 and 55 °C, respectively. It retained 60-70% of its activity over a broad pH range and 80% of its initial activity at 65 °C for 1 h. The thermal stability study indicated an inactivation energy of Ed = 152 kJ mol-1. The half lives at 75 and 85 °C were estimated as 3.6 and 1.02 h, respectively. Thermodynamic parameters, ΔH*, ΔS* and ΔG*, were determined as a function of temperature. The kinetic constants Km and Vmax, using polygalacturonic acid as substrate, were determined as 0.424 g l-1 and 80 μmol min-1, respectively. SDS-PAGE profiling revealed three major bands with molecular weights of 36, 53 and 68 kDa. This enzyme can be considered as a potential candidate in various applications of waste treatment, in food, paper and textile industries.İYT

Conceptual design of an X-FEL facility using CLIC X-band accelerating structure

Doğan, Mustafa (Dogus Author) -- Conference full title: 5th International Particle Accelerator Conference, IPAC 2014; International Congress Center DresdenDresden; Germany; 15 June 2014 through 20 June 2014.Within last decade a linear accelerating structure with an average loaded gradient of 100 MV/m at 12 GHz has been demonstrated in the CLIC study. Recently, it has been proposed to use the CLIC structure to drive an FEL linac. In contrast to CLIC the linac would be powered by klystrons not by a drive beam. The main advantage of this proposal is achieving the required energies in a very short distance, thus the facility would be rather compact. In this study, we present the conceptual design parameters of a facility which could generate laser photon pulses covering the range of 1-75 Angstrom. Shorter wavelengths could also be reached with slightly increasing the energy