Slippage_Scripts_raw_data

R scripts and other data files used in this study. Please always use the latest version number of each file (indicated by "_v***.R)

sequence_raw_data_demultiplexed

Sequence data analysed in this study (fastq and fasta file). The full sequencing run is additionally available on SRA

Geneious 8 file

Geneious 8 compatible file, containing primer extractions and read mappings for the 10 most abundant OTUs for each sample

Scatterplot of Number Specimens in a Species against Number of Haplotypes.

<p>Red dots represent MATCH species, blue dots represent SPLIT species, Green dots represent MIX species. Species written on the Figure represent “outliers”, which constitute species with high number of specimens and high numbers of haplotypes.</p

Bar graphs representing sequence diversity within and between species.

<p>(A) Mean intraspecific divergences within species that constitute a MATCH (B) Distance to nearest neighbour between species that constitute a MATCH (C) Mean intraspecific divergences within all species (minus potential misidentifications, hybrids, and individuals named only to genus) (D) Distance to nearest neighbour between all species (minus potential misidentifications, hybrids, and individuals named only to genus).</p

List of Channidae species, their distributions and type localities as accepted by the Catalogue of Fishes [3].

<p>List of Channidae species, their distributions and type localities as accepted by the Catalogue of Fishes <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0099546#pone.0099546-Eschmeyer1" target="_blank">[3]</a>.</p

Collapsed Funnel Diagram of Neighbour Joining Tree displaying Intraspecific Variation within Channidae.

<p>Triangle bars represent genetic diversity with Channidae. Numbers contained in bracket of each species represent number of individuals that clustered in that particular haplogroup. The species that showed phylogeographical structuring had localities listed after the semi-colons within that particular haplogroup. Species <i>C. maculata*</i> is represented by nine C. sp., one <i>C. maculata</i>, six <i>C. argus</i>, one <i>C. argus (male)x C. maculata</i> (female). Species <i>P. africana</i>* is represented by three <i>P. africana</i> and one <i>P. obscura</i>.</p

Introduced snakehead specimens with corresponding matches on BOLD to reference specimens.

<p>Introduced snakehead specimens with corresponding matches on BOLD to reference specimens.</p