40 research outputs found
Regulation of Mercury Resistance in the Crenarchaeote \u3ci\u3eSulfolobus solfataricus\u3c/i\u3e
Mercuric ion, Hg(II), inactivates generalized transcription in the crenarchaeote Sulfolobus solfataricus. Metal
challenge simultaneously derepresses transcription of mercuric reductase (merA) by interacting with the
archaeal transcription factor aMerR. Northern blot and primer extension analyses identified two additional
Hg(II)-inducible S. solfataricus genes, merH and merI (SSO2690), located on either side of merA. Transcription
initiating upstream of merH at promoter merHp was metal inducible and extended through merA and merI,
producing a merHAI transcript. Northern analysis of a merRA double mutant produced by linear DNA
recombination demonstrated merHp promoter activity was dependent on aMerR to overcome Hg(II) transcriptional
inhibition. Unexpectedly, in a merA disruption mutant, the merH transcript was transiently induced after
an initial period of Hg(II)-mediated transcription inhibition, indicating continued Hg(II) detoxification. Metal
challenge experiments using mutants created by markerless exchange verified the identity of the MerR binding
site as an inverted repeat (IR) sequence overlapping the transcription factor B binding recognition element of
merHp. The interaction of recombinant aMerR with merHp DNA, studied using electrophoretic mobility shift
analysis, demonstrated that complex formation was template specific and dependent on the presence of the IR
sequence but insensitive to Hg(II) addition and site-specific IR mutations that relieved in vivo merHp repression.
Despite containing a motif resembling a distant ArsR homolog, these results indicate aMerR remains
continuously DNA bound to protect and coordinate Hg(II)-responsive control over merHAI transcription. The
new genetic methods developed in this work will promote experimental studies on S. solfataricus and other
Crenarchaeota
Regulation of Mercury Resistance in the Crenarchaeote \u3ci\u3eSulfolobus solfataricus\u3c/i\u3e
Mercuric ion, Hg(II), inactivates generalized transcription in the crenarchaeote Sulfolobus solfataricus. Metal
challenge simultaneously derepresses transcription of mercuric reductase (merA) by interacting with the
archaeal transcription factor aMerR. Northern blot and primer extension analyses identified two additional
Hg(II)-inducible S. solfataricus genes, merH and merI (SSO2690), located on either side of merA. Transcription
initiating upstream of merH at promoter merHp was metal inducible and extended through merA and merI,
producing a merHAI transcript. Northern analysis of a merRA double mutant produced by linear DNA
recombination demonstrated merHp promoter activity was dependent on aMerR to overcome Hg(II) transcriptional
inhibition. Unexpectedly, in a merA disruption mutant, the merH transcript was transiently induced after
an initial period of Hg(II)-mediated transcription inhibition, indicating continued Hg(II) detoxification. Metal
challenge experiments using mutants created by markerless exchange verified the identity of the MerR binding
site as an inverted repeat (IR) sequence overlapping the transcription factor B binding recognition element of
merHp. The interaction of recombinant aMerR with merHp DNA, studied using electrophoretic mobility shift
analysis, demonstrated that complex formation was template specific and dependent on the presence of the IR
sequence but insensitive to Hg(II) addition and site-specific IR mutations that relieved in vivo merHp repression.
Despite containing a motif resembling a distant ArsR homolog, these results indicate aMerR remains
continuously DNA bound to protect and coordinate Hg(II)-responsive control over merHAI transcription. The
new genetic methods developed in this work will promote experimental studies on S. solfataricus and other
Crenarchaeota
Whole blood lead levels are associated with radiographic and symptomatic knee osteoarthritis: a cross-sectional analysis in the Johnston County Osteoarthritis Project
Abstract Introduction Lead (Pb) is known to affect bone, and recent evidence suggests that it has effects on cartilage as well. As osteoarthritis (OA) is a highly prevalent disease affecting bone and cartilage, we undertook the present analysis to determine whether whole blood Pb levels are associated with radiographic and symptomatic OA (rOA and sxOA, respectively) of the knee. Methods The analysis was conducted using cross-sectional data from the Johnston County Osteoarthritis Project, a rural, population-based study, including whole blood Pb levels, bilateral posteroanterior weight-bearing knee radiography and knee symptom data. rOA assessment included joint-based presence (Kellgren-Lawrence (K-L) grade 2 or higher) and severity (none, K-L grade 0 or 1; mild, K-L grade 2; moderate or severe, K-L grade 3 or 4), as well as person-based laterality (unilateral or bilateral). SxOA was deemed present (joint-based) in a knee on the basis of K-L grade 2 or higher with symptoms, with symptoms rated based on severity (0, rOA without symptoms; 1, rOA with mild symptoms; 2, rOA with moderate or severe symptoms) and in person-based analyses was either unilateral or bilateral. Generalized logit or proportional odds regression models were used to examine associations between the knee OA status variables and natural log-transformed blood Pb (ln Pb), continuously and in quartiles, controlling for age, race, sex, body mass index (BMI), smoking and alcohol drinking. Results Those individuals with whole blood Pb data (N = 1,669) had a mean (±SD) age of 65.4 (±11.0) years and a mean BMI of 31.2 (±7.1) kg/m2, including 66.6% women and 35.4% African-Americans, with a median blood Pb level of 1.8 μg/dl (range, 0.3 to 42.0 μg/dl). In joint-based analyses, for every 1-U increase in ln Pb, the odds of prevalent knee rOA were 20% higher (aOR, 1.20; 95% CI, 1.01 to 1.44), while the odds of more severe rOA were 26% higher (aOR, 1.26; 95% CI, 1.05 to 1.50, under proportional odds). In person-based analyses, the odds of bilateral rOA were 32% higher for each 1-U increase in ln Pb (aOR, 1.32; 95% CI, 1.03 to 1.70). Similarly for knee sxOA, for each 1-U increase in ln Pb, the odds of having sxOA were 16% higher, the odds of having more severe symptoms were 17% higher and the odds of having bilateral knee symptoms were 25% higher. Similar findings were obtained with regard to ln Pb in quartiles. Conclusions Increases in the prevalence and severity measures for both radiographically and symptomatically confirmed knee OA (although statistically significant only for rOA) were observed with increasing levels of blood Pb, suggesting that Pb may be a potentially modifiable environmental risk factor for OA
The Science Performance of JWST as Characterized in Commissioning
This paper characterizes the actual science performance of the James Webb
Space Telescope (JWST), as determined from the six month commissioning period.
We summarize the performance of the spacecraft, telescope, science instruments,
and ground system, with an emphasis on differences from pre-launch
expectations. Commissioning has made clear that JWST is fully capable of
achieving the discoveries for which it was built. Moreover, almost across the
board, the science performance of JWST is better than expected; in most cases,
JWST will go deeper faster than expected. The telescope and instrument suite
have demonstrated the sensitivity, stability, image quality, and spectral range
that are necessary to transform our understanding of the cosmos through
observations spanning from near-earth asteroids to the most distant galaxies.Comment: 5th version as accepted to PASP; 31 pages, 18 figures;
https://iopscience.iop.org/article/10.1088/1538-3873/acb29
The James Webb Space Telescope Mission
Twenty-six years ago a small committee report, building on earlier studies,
expounded a compelling and poetic vision for the future of astronomy, calling
for an infrared-optimized space telescope with an aperture of at least .
With the support of their governments in the US, Europe, and Canada, 20,000
people realized that vision as the James Webb Space Telescope. A
generation of astronomers will celebrate their accomplishments for the life of
the mission, potentially as long as 20 years, and beyond. This report and the
scientific discoveries that follow are extended thank-you notes to the 20,000
team members. The telescope is working perfectly, with much better image
quality than expected. In this and accompanying papers, we give a brief
history, describe the observatory, outline its objectives and current observing
program, and discuss the inventions and people who made it possible. We cite
detailed reports on the design and the measured performance on orbit.Comment: Accepted by PASP for the special issue on The James Webb Space
Telescope Overview, 29 pages, 4 figure
Regulation of Mercury Resistance in the Crenarchaeote Sulfolobus solfataricus
Mercuric ion, Hg(II), inactivates generalized transcription in the crenarchaeote Sulfolobus solfataricus. Metal challenge simultaneously derepresses transcription of mercuric reductase (merA) by interacting with the archaeal transcription factor aMerR. Northern blot and primer extension analyses identified two additional Hg(II)-inducible S. solfataricus genes, merH and merI (SSO2690), located on either side of merA. Transcription initiating upstream of merH at promoter merHp was metal inducible and extended through merA and merI, producing a merHAI transcript. Northern analysis of a merRA double mutant produced by linear DNA recombination demonstrated merHp promoter activity was dependent on aMerR to overcome Hg(II) transcriptional inhibition. Unexpectedly, in a merA disruption mutant, the merH transcript was transiently induced after an initial period of Hg(II)-mediated transcription inhibition, indicating continued Hg(II) detoxification. Metal challenge experiments using mutants created by markerless exchange verified the identity of the MerR binding site as an inverted repeat (IR) sequence overlapping the transcription factor B binding recognition element of merHp. The interaction of recombinant aMerR with merHp DNA, studied using electrophoretic mobility shift analysis, demonstrated that complex formation was template specific and dependent on the presence of the IR sequence but insensitive to Hg(II) addition and site-specific IR mutations that relieved in vivo merHp repression. Despite containing a motif resembling a distant ArsR homolog, these results indicate aMerR remains continuously DNA bound to protect and coordinate Hg(II)-responsive control over merHAI transcription. The new genetic methods developed in this work will promote experimental studies on S. solfataricus and other Crenarchaeota
Radial Melt Segregation During Extrusion of Partially Molten Rocks
We performed a series of extrusion experiments on partially molten samples of forsterite plus 10 vol% of an anorthite-rich melt to investigate melt segregation in a pipe-extrusion geometry and test the predictions of two-phase flow theory with viscous anisotropy. The employed flow geometry has not been experimentally investigated for partially molten rocks; however, numerical solutions for a similar, pipe-Poiseuille geometry are available. Samples were extruded from a 6-mm diameter reservoir into a 2-mm diameter channel under a fixed normal stress at 1350°C and 0.1 MPa. The melt distribution in the channel was subsequently mapped with optical and backscattered electron microscopy and analyzed via quantitative image analysis. Melt segregated from the center toward the outer radius of the channel. The melt fraction at the wall increased with increasing extrusion duration and with increasing shear stress. The melt fraction profiles are parabolic with the melt fraction at the wall reaching 0.17–0.66, values 2 to 16 times higher than at the channel center. Segregation of melt toward the wall of the channel is consistent with base-state melt segregation as predicted by two-phase flow theory with viscous anisotropy. However, melt-rich sheets inclined at a low angle to the wall, which are anticipated from two-phase flow theory, were not observed, indicating that the compaction length is larger than the channel diameter. The results of our experiments are a test of two-phase flow theory that includes viscous anisotropy, an essential theoretical frame work needed for modeling large-scale melt migration and segregation in the upper mantle.National Science Foundation (Grant EAR‐1520647
Understanding Barriers to Evidence-Based Assessment: Clinician Attitudes Toward Standardized Assessment Tools
In an era of evidence-based practice, why are clinicians not typically engaged in evidence-based assessment? To begin to understand this issue, a national multidisciplinary survey was conducted to examine clinician attitudes toward standardized assessment tools. 1442 child clinicians provided opinions about the psychometric qualities of these tools, their benefit over clinical judgment alone, and their practicality. Doctoral-level clinicians and psychologists expressed more positive ratings in all three domains than master’s-level clinicians and non-psychologists respectively, although only the disciplinary differences remained significant when predictors were examined simultaneously. All three attitude scales were predictive of standardized assessment tool use, although practical concerns were the strongest and only independent predictor of use