Slower ship speed in the Bahamas due to COVID-19 produces a dramatic reduction in ocean sound levels

Funding for the purchase of SoundTrap hydrophones and associated field work came from Field School, Sabine and Reinhold Probst, M Rogers, The Devereux Ocean Foundation and The Bahamian Environment Protection Foundation.As underwater noise from ship traffic increases, profound effects on the marine environment highlight the need for improved mitigation measures. One measure, reduction in ship speed, has been shown to be one of the key drivers in reducing sound source levels of vessels. In 2017, a study began to assess the impacts of increasing commercial shipping traffic on sperm whales in Northwest Providence Channel, northern Bahamas, an international trade route that primarily serves the southeast US. Ship data were collected from an Automatic Identification System (AIS) station combined with recordings from an acoustic recorder to measure underwater sound levels and to detect the presence of sperm whales. Here we analyze a subset of these data to opportunistically investigate potential changes in ship traffic before and during the COVID-19 pandemic. These data span one calendar year from October 2019 to October 2020. A pre-COVID-19 dataset of 121 days, from a recorder approximately 2 km from the shipping route was compared to a 134-day dataset collected during COVID-19 from the same site, comprising 2900 and 3181 ten-minute recordings, respectively. A dramatic decrease in ocean noise levels concurrent with changes in shipping activity occurred during the pandemic. The mean pre-COVID-19 power density level in the 111–140 Hz 1/3-octave band was 88.81 dB re 1 μPa (range 81.38–100.90) and decreased to 84.27 dB re 1 μPa (range 78.60–99.51) during COVID-19, equating to a 41% reduction in sound pressure levels (SPL). After differences in seasonal changes in wind speed were accounted for, SPL decreased during the pandemic by 3.98 dB (37%). The most notable changes in ship activity were significantly reduced vessel speeds for all ship types and fewer ships using the area during the pandemic. Vessel speed was highly correlated to SPL and the only ship-based variable that predicted SPLs. Despite the opportunistic nature [i.e., not a standard before-after-control-impact (BACI) study], this study provides a unique opportunity to assess the effectiveness of ship traffic management strategies, such as slowing ships down, to mitigate impacts on marine life in the study area, including local sperm whale populations.Publisher PDFPeer reviewe

Investigating local population dynamics of bottlenose dolphins in the northern Bahamas and the impact of hurricanes on survival

This study was made possible with financial support from Earthwatch Institute, Atlantis Blue Project Foundation, with permission to conduct research granted by the Bahamas Department of Marine Resources.Little Bahama Bank in the northern Bahamas supports several populations of bottlenose dolphins (Tursiops truncatus). We provide the first estimates of birth rate and age-class-specific apparent survival rates for the local South Abaco population using data from a long-term (1997–2014) photo-identification (photo-ID) study and use the estimated life history parameters in a population viability analysis (PVA) to predict future population trends. Hurricane events are predicted to become more intense due to climate change but knowledge of how hurricanes may impact cetacean populations is limited. Little Bahama Bank is subject to hurricane activity, so we also investigate the potential impact of hurricanes on calf, juvenile and adult survival. Photo-ID data confirmed the existence of a core adult population with relatively high site fidelity in South Abaco, but also evidence of transient animals. Estimated annual birth rate was 0.278 (95% CI: 0.241–0.337). We found strong support for a decline in apparent survival for all age-classes. Estimated survival declined by 9% in adults (0.941 in 1998, to 0.855 in 2013), 5% in juveniles (0.820 in 2000, to 0.767 in 2013) and 36% in calves (0.970 in 1997, to 0.606 in 2013). Evidence that survival was influenced by repeated hurricane activity leading to increased mortality and/or emigration was stronger for calves and juveniles than for adults. PVA simulations of an assumed isolated South Abaco population showed that declines would lead to extinction within decades, even under the most optimistic scenario. Future work should focus on establishing if South Abaco is part of natural source–sink metapopulation dynamics on Little Bahama Bank by assessing trends in abundance in local populations and establishing how they interact; this will be important for assessing their conservation status in a potentially increasingly changing environment.Publisher PDFPeer reviewe

Estimating group size from acoustic footprint to improve Blainville’s beaked whale abundance estimation

The numbers of animals in groups and the density of Blainville’s beaked whale Mesoplodon densirostris (Md) were estimated using passive acoustic data collected on the Atlantic Undersea Test and Evaluation Center (AUTEC). Md typically associate in groups, producing ultrasonic echolocation signals when foraging, and are routinely detected year-round on the AUTEC range. AUTEC includes a large network of hydrophones cabled to shore that can be used to detect Md echolocation signals. Using a first data set, with known group sizes, we used generalized linear models (GLMs) to model group size as a function of the acoustic footprint of a detected deep dive as perceived on the AUTEC hydrophones. The most important variable to explain group size was the detected click rate (total number of clicks detected divided by total length of vocal period duration). Using a second data set, covering 3 separate time periods in 2011 with automated group dive detections, we estimated beaked whale density using a dive counting approach. False positives were removed through manual inspection, removing dives with biologically infeasible characteristics. This led to a total of 8271 detections of beaked whale deep dives, with the average number per day in the three time periods considered being 75, 80 and 76 respectively. Using selected GLM, the mean estimated group size was 2.36 (95% CI 2.15-2.60), 2.30 (95% CI 2.08-2.56), and 2.33 (95% CI 2.19-2.58) whales/group for the 1st, 2nd and 3rd time period. Md density was estimated at 15.8 (95% CI 13.6-21.9), 16.5 (95% CI 13.8-22.4), and 15.8 (95% CI 13.2-21.2) whales/1000km2, respectively. These results support findings from previous studies, and will allow a more precise estimation of group sizes and densities for Md in future research.PostprintPeer reviewe

Echolocation click parameters and biosonar behaviour of the dwarf sperm whale (Kogia sima)

PhD and fieldwork funding were provided by the Danmarks Grundforskningsfond (27125 to P.T.M.), the Oticon Fonden (18-0340 to C.E.M.) the Dansk Akustisk Selskab (to C.E.M.), the South Africa National Research Foundation (research career advancement fellowship to S.E.) and the Claude Leon Foundation (postdoctoral fellowship to T.G.).Dwarf sperm whales (Kogia sima) are small toothed whales that produce narrow-band high-frequency (NBHF) echolocation clicks. Such NBHF clicks, subject to high levels of acoustic absorption, are usually produced by small, shallow-diving odontocetes, such as porpoises, in keeping with their short-range echolocation and fast click rates. Here, we sought to address the problem of how the little-studied and deep-diving Kogia can hunt with NBHF clicks in the deep sea. Specifically, we tested the hypotheses that Kogia produce NBHF clicks with longer inter-click intervals (ICIs), higher directionality and higher source levels (SLs) compared with other NBHF species. We did this by deploying an autonomous deep-water vertical hydrophone array in the Bahamas, where no other NBHF species are present, and by taking opportunistic recordings of a close-range Kogia sima in a South African harbour. Parameters from on-axis clicks (n=46) in the deep revealed very narrow-band clicks (root mean squared bandwidth, BWRMS, of 3±1 kHz), with SLs of up to 197 dB re. 1 µPa peak-to-peak (μPapp) at 1 m, and a half-power beamwidth of 8.8 deg. Their ICIs (mode of 245 ms) were much longer than those of porpoises (<100 ms), suggesting an inspection range that is longer than detection ranges of single prey, perhaps to facilitate auditory streaming of a complex echo scene. On-axis clicks in the shallow harbour (n=870) had ICIs and SLs in keeping with source parameters of other NBHF cetaceans. Thus, in the deep, dwarf sperm whales use a directional, but short-range echolocation system with moderate SLs, suggesting a reliable mesopelagic prey habitat.Publisher PDFPeer reviewe

Clicks of dwarf sperm whales (Kogia sima)

Captive acoustic recordings were approved by the Institutional Animal Care and Use Committee of the University of South Florida. Research in The Bahamas was conducted under the Department of Fisheries research permit 12A and was supported by a Royal Society University Research Fellowship to VMJ. Recordings in Guam were made under NMFS permit 15240 and were supported with funding provided by the NOAA/NMFS Pacific Islands Fisheries Science Center, and the U.S. Navy Pacific Fleet.The two species of the genus Kogia are widely distributed throughout the world's temperate and tropical oceans, but because they are small and highly cryptic, they are difficult to monitor. The acoustic signals of K. breviceps have been described previously, but the signals of K. sima have remained unknown. Here we present three recordings of K. sima, two from free-ranging animals and one from a captive setting, representing both the Atlantic Ocean and Pacific Ocean. The acoustic signals of K. sima are very similar to the signals of K. breviceps and other species that have narrow-band, high-frequency (NBHF) clicks. Free-ranging K. sima produce “usual” clicks that have mean peak and centroid frequencies of 127–129 kHz, mean −3 dB bandwidth of 10 kHz, mean −10 dB bandwidth of 16–17 kHz, and mean interclick interval of 110–164 ms. Although K. sima clicks cannot yet be distinguished from those of K. breviceps or other NBHF clicking species, our detailed description of this species' signals reveals the similarities between the two Kogia species, and thus allows for passive acoustic monitoring of the genus Kogia in regions where other NBHF species are not present.PostprintPeer reviewe

Insights into Blainville's beaked whale (Mesoplodon densirostris) echolocation ontogeny from recordings of mother-calf pairs

The data we report were collected during two studies, “Behavioral Response Study-2008” and “Using Satellite Telemetry to Monitor Beaked whale Movements on a Navy Range,” both funded by the U.S. Office of Naval Research (ONR). CD received funds for analysis from ONR as part of the “Population Consequences of Acoustic Disturbance” project. LR and PT were supported by the Marine Alliance for Science and Technology for Scotland (MASTS) pooling initiative and their support is gratefully acknowledged. MASTS is funded by the Scottish Funding Council (grant reference HR09011) and contributing institutions.PostprintPeer reviewe

Future directions in research on beaked whales

Until the 1990s, beaked whales were one of the least understood groups of large mammals. Information on northern bottlenose whales (Hyperoodon ampullatus) and Baird’s beaked whales (Berardius bairdii) was available from data collected during whaling, however, little information existed on the smaller species other than occasional data gleaned from beach-cast animals. Recent research advances have been plentiful. Increasing global survey effort, together with morphometric and genetic analyses have shown at least 22 species in this group. Longitudinal field studies of at least four species (H. ampullatus, B. bairdii, Ziphius cavirostris, Mesoplodon densirostris) have become established over the last three decades. Several long-term studies support photo-identification catalogs providing insights into life history, social structure and population size. Tag-based efforts looking at diving, movements and acoustics have provided detail on individual behavior as well as population structure and ranges. Passive acoustic monitoring has allowed long-term and seasonal monitoring of populations. Genetic studies have uncovered cryptic species and revealed contrasting patterns of genetic diversity and connectivity amongst the few species examined. Conservation concern for these species was sparked by mass strandings coincident with military mid-frequency sonar use. Fat and gas emboli have been symptomatic indicators of mortalities related to sonar exposure, suggesting that their vulnerability stems from the physiological exertion of extreme diving for medium-sized whales. Behavioral response experiments have now shown that beaked whales appear to cease foraging and delay their return to foraging and/or leave the area in association with exposure to mid-frequency signals at low acoustic levels. Future priorities for these species will be to (1) continue field-studies to better understand smaller-scale habitat use, vital rates and social structure; (2) develop better detection methods for larger-scale survey work; (3) improve methodology for monitoring energetics, individual body condition and health; (4) develop tools to better understand physiology; (5) use recent genetic advances with improved sample databanks to re-examine global and local beaked whale relationships; (6) further quantify anthropogenic impacts (both sonar and other noise) and their population consequences (7) apply acquired data for realistic mitigation of sonar and other anthropogenic impacts for beaked whale conservation.Publisher PDFPeer reviewe

Behavioral responses of satellite tracked Blainville's beaked whales (Mesoplodon densirostris) to mid-frequency active sonar

Funding support for tagging was provided by the US Navy's Office of Naval Research and Living Marine Resources program, the Chief of Naval Operations' Energy and Environmental Readiness Division and the NOAA Fisheries Ocean Acoustics Program. Trevor Joyce was supported by a National Research Council postdoctoral research associateship, hosted by NOAA's Southwest Fisheries Science Center.The vulnerability of beaked whales (Family: Ziphiidae) to intense sound exposure has led to interest in their behavioral responses to mid‐frequency active sonar (MFAS, 3–8 kHz). Here we present satellite‐transmitting tag movement and dive behavior records from Blainville's beaked whales (Mesoplodon densirostris) tagged in advance of naval sonar exercises at the Atlantic Undersea Test and Evaluation Center (AUTEC) in the Bahamas. This represents one of the largest samples of beaked whales individually tracked during sonar operations (n = 7). The majority of individuals (five of seven) were displaced 28–68 km after the onset of sonar exposure and returned to the AUTEC range 2–4 days after exercises ended. Modeled sound pressure received levels were available during the tracking of four individuals and three of those individuals showed declines from initial maxima of 145–172 dB re 1 μPa to maxima of 70–150 dB re 1 μPa following displacements. Dive behavior data from tags showed a continuation of deep diving activity consistent with foraging during MFAS exposure periods, but also suggested reductions in time spent on deep dives during initial exposure periods. These data provide new insights into behavioral responses to MFAS and have important implications for modeling the population consequences of disturbance.Publisher PDFPeer reviewe

Using individual-based bioenergetic models to predict the aggregate effects of disturbance on populations : a case study with beaked whales and Navy sonar

Funding: This research was supported by the Office of Naval Research (https://www.onr.navy.mil/) grant N0001419WX00431 and N000142012045: “Integrating information on displacement caused by mid-frequency active sonar and measurements of prey field into a population consequences of disturbance model for beaked whales” awarded to Dave Moretti, ND, SW, JH, LT, KB-B, AdR & VH. Funding support for tagging was provided by the US Navy's Office of Naval Research and Living Marine Resources program, the Chief of Naval Operations' Energy and Environmental Readiness Division and the NOAA Fisheries Ocean Acoustics Program.Anthropogenic activities can lead to changes in animal behavior. Predicting population consequences of these behavioral changes requires integrating short-term individual responses into models that forecast population dynamics across multiple generations. This is especially challenging for long-lived animals, because of the different time scales involved. Beaked whales are a group of deep-diving odontocete whales that respond behaviorally when exposed to military mid-frequency active sonar (MFAS), but the effect of these nonlethal responses on beaked whale populations is unknown. Population consequences of aggregate exposure to MFAS was assessed for two beaked whale populations that are regularly present on U.S. Navy training ranges where MFAS is frequently used. Our approach integrates a wide range of data sources, including telemetry data, information on spatial variation in habitat quality, passive acoustic data on the temporal pattern of sonar use and its relationship to beaked whale foraging activity, into an individual-based model with a dynamic bioenergetic module that governs individual life history. The predicted effect of disturbance from MFAS on population abundance ranged between population extinction to a slight increase in population abundance. These effects were driven by the interaction between the temporal pattern of MFAS use, baseline movement patterns, the spatial distribution of prey, the nature of beaked whale behavioral response to MFAS and the top-down impact of whale foraging on prey abundance. Based on these findings, we provide recommendations for monitoring of marine mammal populations and highlight key uncertainties to help guide future directions for assessing population impacts of nonlethal disturbance for these and other long-lived animals.Publisher PDFPeer reviewe