Dos biomarcadores de la plasticidad de la expresión génica en corales Pocillopora del arrecife Carrizales, Pacífico Tropical Mexicano

Background. Gene expression (GE) plasticity is an acclimation response that allows organisms to adjust rapidly to environmental changes, providing an adaptive advantage. GE biomarkers are emerging as a valua-ble tool for linking the organism’s physiological plasticitywith the synergetic effects of large-scale climatic conditions and local impacts such as temperature and nutrients. Objectives. In this study, we investigate the GE plasticity of the 70-kDa heat shock protein (hsp70) and the carbonic anhydrase enzyme (CA) to confirm the ability of those two genes as biomarkers of the Cellular Stress Response and Cellular Homeostasis Res-ponse, respectively. Methods. Using qPCR, we evaluate the GE plasticity of coral colonies from Pocillopora capitata, Pocillopora damicornis,and Pocillopora verrucosa at the Carrizales reef (Colima coast of Mexico) naturally exposed to environmental changes in the Sea Surface Temperature (SST), productivity and nutrients using the cellular density of Symbiodiniaceae and chlorophyll content as health indices. Results. Our results clearly show GE plasticity in the hsp70 for Pocillopora verrucosa and Pocillopora damicornis related to a daily environmental change in temperature and nutrients. On the other hand, the CA gene expression shows no change in response to daily variations. However, there was a significantly high expression of CA and a lower expression of hsp70 in Pocillopora capitata. Furthermore, we found no significant differences in the health in-dices, suggesting some degree of physiological plasticity in Pocillopora corals like its extensive morphological plasticity that could reflect different adaptation capacities to low temperatures and high nutrients during the spring season in the central Mexican Pacific. Conclusions. Evaluating the phenotypic plasticity (morphology and molecular physiology) could help identify coral colonies with a more significant potential to survive en-vironmental stressors. The latter is an essential consideration for managing, conserving, and restoring coral reefs in the Mexican Pacific.Antecedentes. La plasticidad de la expresión génica (GE) es una respuesta inmediata de aclimatación al cambio ambiental que puede proporcionar una ventaja adaptativa. Los biomarcadores de GE están emer-giendo como una herramienta valiosa para vincular la plasticidad fisiológica del organismo con los efectos sinérgicos del cambio climático y el impacto local como la temperatura y nutrientes. Objetivos. Investigamos la plasticidad de la expresión de genes que codifican para la proteína de choque térmico de 70-kDa (hsp70) y la enzima anhidrasa carbónica (CA) para confirmar su utilidad como biomarcadores de la respuesta de estrés y de homeostasis celular, respectivamente. Métodos. Evaluamos la GE mediante qPCR en colonias de corales Pocilloporacapitata, Pocillopora damicornis y Pocillopora verrucosa del arrecife Carrizales (Colima, México) expuestas a un cambio natural en la temperatura de la superficie del mar (SST), productividad pri-maria y nutrientes utilizando la densidad de Symbiodiniaceae y el contenido de clorofila como indicadores de salud. Resultados. La plasticidad de la GE de hsp70 en Pocillopora damicornis y Pocillopora verrucosa se asocia con la variación diaria de temperatura y nutrientes, mientras que el gen de la CA no muestra cambios de expresión relacionada con esta variabilidad. Sin embargo, en Pocillopora capitata se encontró una expresión significativamente mayor de CA y una menor expresión de hsp70. Estos resultados reflejan un grado de plasticidad fisiológica en corales Pocillopora similar a la extensa plasticidad morfológica dentro de este género, lo que podría sugerir diferentes capacidades de adaptación a la temporada primave-ral de bajas temperaturas y alto contenido de nutrientes en la región. Conclusiones. Evaluar la plasticidad fenotípica (morfología y fisiolo-gía molecular) podría ser útil para identificar colonias de corales con un mayor potencial de sobrevivencia al estrés ambiental. Lo anterior resulta relevante para la conservación, manejo y restauración de los arrecifes de coral del Pacífico mexicano.   &nbsp

Linking the impact of bacteria on phytoplankton growth with microbial community composition and co-occurrence patterns

The interactions between microalgae and bacteria have recently emerged as key control factors which might contribute to a better understanding on how phytoplankton communities assemble and respond to environmental disturbances. We analyzed partial 16S rRNA and 18S rRNA genes from a total of 42 antibiotic bioassays, where phytoplankton growth was assessed in the presence or absence of an active bacterial community. A significant negative impact of bacteria was observed in 18 bioassays, a significant positive impact was detected in 5 of the cases, and a non-detectable effect occurred in 19 bioassays. Thalasiossira spp., Chlorophytes, Vibrionaceae and Alteromonadales were relatively more abundant in the samples where a positive effect of bacteria was observed compared to those where a negative impact was observed. Phytoplankton diversity was lower when bacteria negatively affect their growth than when the effect was beneficial. The phytoplankton-bacteria co-occurrence subnetwork included many significant Chlorophyta-Alteromonadales and Bacillariophyceae-Alteromonadales positive associations. Phytoplankton-bacteria co-exclusions were not detected in the network, which contrasts with the negative effect of bacteria on phytoplankton growth frequently detected in the bioassays, suggesting strong competitive interactions. Overall, this study adds strong evidence supporting the key role of phytoplanktonbacteria interactions in the microbial communities.Agencia Estatal de Investigación | Ref. CTM2017-83362-RAgencia Estatal de Investigación | Ref. PID2019-110011RB-C33Xunta de Galicia | Ref. ED481A-2019/290Xunta de Galicia | Ref. ED481A-2018/288Universidade de Vigo/CISU

Gene expression plasticity in Pocillopora corals from 2 locations on the Carrizales Reef, Pacific coast of Mexico

The greatest threat scleractinian corals face today is accelerated climate change. Assuming that most scleractinians are incapable of genetic adaptation to rapid global changes, the alternative response would be phenotypic plasticity, which is classically described as acclimatization. With the purpose of establishing a baseline for the study of acclimatization in corals of the Pacific coast of Mexico, we assessed the molecular and physiological response of 36 colonies of 3 Pocillopora morphospecies (Pocillopora cf. capitata, Pocillopora cf. damicornis, and Pocillopora cf. verrucosa) located at 2 sites (east and west) on Carrizales Reef. Our results show higher incidence of light and chlorophyll concentrations in seawater samples from the west side, suggesting the presence of at least 2 microenvironments with more and less light in the reef. In response, coral morphospecies from the west side showed higher gene expression and significant differences in pigment concentrations, endosymbiont densities, and metabolic markers (RNA, DNA, and proteins). Given the present concern about the future of coral reefs, we consider that the present study could be used as a baseline for the study of the physiological and molecular plasticity of Pocillopora corals in Mexican waters, so conservation strategies could be developed for key morphospecies in coral reefs on the Pacific coast of Mexico

Coastal upwelling systems as dynamic mosaics of bacterioplankton functional specialization

Coastal upwelling areas are extraordinarily productive environments where prokaryotic communities, the principal remineralizers of dissolved organic matter (DOM), rapidly respond to phytoplankton bloom and decay dynamics. Nevertheless, the extent of variability of key microbial functions in such dynamic waters remains largely unconstrained. Our metatranscriptomics analyses of 162 marker genes encoding ecologically relevant prokaryotic functions showed distinct spatial-temporal patterns in the NW Iberian Peninsula upwelling area. Short-term (daily) changes in specific bacterial functions associated with changes in biotic and abiotic factors were superimposed on seasonal variability. Taxonomic and functional specialization of prokaryotic communities, based mostly on different resource acquisition strategies, was observed. Our results uncovered the potential influence of prokaryotic functioning on phytoplankton bloom composition and development (e.g., Cellvibrionales and Flavobacteriales increased relative gene expression related to vitamin B12 and siderophore metabolisms during Chaetoceros and Dinophyceae summer blooms). Notably, bacterial adjustments to C- or N-limitation and DMSP availability during summer phytoplankton blooms and different spatial-temporal patterns of variability in the expression of genes with different phosphate affinity indicated a complex role of resource availability in structuring bacterial communities in this upwelling system. Also, a crucial role of Cellvibrionales in the degradation of DOM (carbohydrate metabolism, TCA cycle, proteorhodopsin, ammonium, and phosphate uptake genes) during the summer phytoplankton bloom was found. Overall, this dataset revealed an intertwined mosaic of microbial interactions and nutrient utilization patterns along a spatial-temporal gradient that needs to be considered if we aim to understand the biogeochemical processes in some of the most productive ecosystems in the world´s oceans

Inputs of seabird guano alter microbial growth, community composition and the phytoplankton–bacterial interactions in a coastal system

Seabird guano enters coastal waters providing bioavailable substrates for microbial plankton, but their role in marine ecosystem functioning remains poorly understood. Two concentrations of the water soluble fraction (WSF) of gull guano were added to different natural microbial communities collected in surface waters from the Ría de Vigo (NW Spain) in spring, summer, and winter. Samples were incubated with or without antibiotics (to block bacterial activity) to test whether gull guano stimulated phytoplankton and bacterial growth, caused changes in taxonomic composition, and altered phytoplankton–bacteria interactions. Alteromonadales, Sphingobacteriales, Verrucomicrobia and diatoms were generally stimulated by guano. Chlorophyll a (Chl a) concentration and bacterial abundance significantly increased after additions independently of the initial ambient nutrient concentrations. Our study demonstrates, for the first time, that the addition of guano altered the phytoplankton–bacteria interaction index from neutral (i.e. phytoplankton growth was not affected by bacterial activity) to positive (i.e. phytoplankton growth was stimulated by bacterial activity) in the low-nutrient environment occurring in spring. In contrast, when environmental nutrient concentrations were high, the interaction index changed from positive to neutral after guano additions, suggesting the presence of some secondary metabolite in the guano that is needed for phytoplankton growth, which would otherwise be supplied by bacteria.Universidade de Vigo/CISUGAgencia Estatal de Investigación | Ref. CTM2017‐83362‐