Recent high-energy marine events in the sediments of the Lagoa de Óbidos and Martinhal (Portugal): Recognition, age and likely causes

© 2012 Author(s) - This work is distributed under the Creative Commons Attribution 3.0 License.This article has been made available through the Brunel Open Access Publishing Fund.A key issue in coastal hazards research is the need to distinguish sediments deposited by past extreme storms from those of past tsunamis. This study contributes to this aim by investigating patterns of sedimentation associated with extreme coastal flood events, in particular, within the Lagoa de Óbidos (Portugal). The recent stratigraphy of this coastal lagoon was studied using a wide range of techniques including visual description, grain-size analysis, digital and x-ray photography, magnetic susceptibility and geochemical analysis. The sequence was dated by 14C, 210Pb and Optically Stimulated Luminescence. Results disclose a distinctive coarser sedimentary unit, within the top of the sequence studied, and shown in quartz sand by the enrichment of elements with marine affinity (e.g., Ca and Na) and carbonates. The unit fines upwards and inland, thins inland and presents a sharp erosive basal contact. A noticeable post-event change in the sedimentary pattern was observed. The likely agent of sedimentation is discussed here and the conceivable association with the Great Lisbon tsunami of AD 1755 is debated, while a comparison is attempted with a possibly synchronous deposit from a tsunami in Martinhal (Algarve, Portugal). The possibility of a storm origin is also discussed in the context of the storminess of the western Portuguese coast and the North Atlantic Oscillation. This study highlights certain characteristics of the sedimentology of the deposits that may have a value in the recognition of extreme marine inundation signatures elsewhere in the world.This article is made available through the Brunel Open Access Publishing Fund

Benthic foraminifera: Their importance to future reef island resilience

The provenance, age and redistribution of sediments across Raine Reef (11°35’28”S 144°02’17”E), northern Great Barrier Reef (GBR) are described. Sediments of both the reef flat and sand cay beaches are composed predominantly of benthic foraminifera (35.2% and 41.5% respectively), which is a common occurrence throughout the Pacific region. The major contemporary sediment supply to the island was identified as Baculogypsina sphaerulata, a relatively large (1-2 mm exclusive of spines) benthic foraminifera living on the turf algae close to the reef periphery, and responsible for beach sand nourishment. Radiometric ages of foraminiferal tests of ranging taphonomic preservation (pristine to severely abraded) included in surficial sediments collected across the reef flat were remarkably young (typically <60 years). Results indicate rapid transport and/or breakdown of sand with a minimal storage time on the reef (likely <102 years), inferring a tight temporal link between the reef island and sediment production on the surrounding reef. This study demonstrates the critical need for further research on the precise residence times of the major reef sediment components and transport pathways, which are fundamental to predicting future island resilience. © Copyright belongs to the authors

Fundamental studies of the behaviour of antimony in the lead-acid battery

One of the technological problems associated with the lead-acid battery is the self-discharge of the negative plate as a result of the deposition of antimony onto the sponge lead electrode, a process known as 'Antimony Poisoning'. The rate of deposition (III) from aqueous sulphuric acid onto pure lead electrodes was measured using a tracer technique. The deposition rate was found to be independent of the hydrogen overpotential of the electrode and was ascribed to the electrochemical displacement reaction 2Sb0+ 3Pb + 4H+ + 3SO4 = 2Sb + 3Pb SO4 + 2H20. The results obtained were assessed in conjunction with published data, and a comprehensive picture of the various antimony (III) and antimony (V) reaction paths occurring in the lead-acid battery has been presented. The placing of a suitable ion-exchange material between the separator and the negative plate, with the object of removing antimony (III), could be a feasible method of limiting the problem of 'Antimony Poisoning'

Evidence of distinct RELN and TGFB1 genetic associations in familial and non-familial otosclerosis in a British population

Otosclerosis is a common form of hearing loss which typically presents in young adults. The disease has a familial, monogenic form and a non-familial form with a more complex aetiology. A previous genome wide association study identified evidence that variants within RELN are associated with the condition. Other genes in which an association has been reported include BMP2, COL1A1, FGF2, PPP2R5B and TGFB1. However, follow up studies have often failed to replicate initial positive results. The aim of this study was to establish if an association exists between eight single nucleotide polymorphisms (SNPs) in these six previously implicated genes and otosclerosis in a British case-control cohort (n = 748). Evidence of an association between rs1800472 in TGFB1 and otosclerosis was found (p = 0.034), this association was strongest amongst non-familial cases (p = 0.011). No evidence of an association was detected with variants in COL1A1, FGF2, BMP2, and PPP2R5B. No association between variation in RELN and otosclerosis was observed in the whole cohort. However, a significant association (p = 0.0057) was detected between one RELN SNP (rs39399) and otosclerosis in familial patients. Additionally, we identify expression of one RELN transcript in 51 of 81 human stapes tested, clarifying previous conflicting data as to whether RELN is expressed in the affected tissue. Our findings strengthen the association of TGFB1 (rs1800472) with otosclerosis and support a relationship between RELN and familial otosclerosis only, which may explain previous variable replications

Mutations and altered expression of SERPINF1 in patients with familial otosclerosis

Otosclerosis is a relatively common heterogenous condition, characterized by abnormal bone remodelling in the otic capsule leading to fixation of the stapedial footplate and an associated conductive hearing loss. Although familial linkage and candidate gene association studies have been performed in recent years, little progress has been made in identifying disease-causing genes. Here, we used whole-exome sequencing in four families exhibiting dominantly inherited otosclerosis to identify 23 candidate variants (reduced to 9 after segregation analysis) for further investigation in a secondary cohort of 84 familial cases. Multiple mutations were found in the SERPINF1 (Serpin Peptidase Inhibitor, Clade F) gene which encodes PEDF (pigment epithelium-derived factor), a potent inhibitor of angiogenesis and known regulator of bone density. Six rare heterozygous SERPINF1 variants were found in seven patients in our familial otosclerosis cohort; three are missense mutations predicted to be deleterious to protein function. The other three variants are all located in the 5'-untranslated region (UTR) of an alternative spliced transcript SERPINF1-012 RNA-seq analysis demonstrated that this is the major SERPINF1 transcript in human stapes bone. Analysis of stapes from two patients with the 5'-UTR mutations showed that they had reduced expression of SERPINF1-012 All three 5'-UTR mutations are predicted to occur within transcription factor binding sites and reporter gene assays confirmed that they affect gene expression levels. Furthermore, RT-qPCR analysis of stapes bone cDNA showed that SERPINF1-012 expression is reduced in otosclerosis patients with and without SERPINF1 mutations, suggesting that it may be a common pathogenic pathway in the disease

Methods to Assess the Direct Interaction of C. Jejuni With Mucins

Studies of the interaction of bacteria with mucus secreting cells can be complemented at a more mechanistic level by exploring the interaction of bacteria with purified mucins. Here we describe a far western blotting approach to show how C. jejuni proteins separated by SDS PAGE and transferred to a membrane or slot blotted directly onto a membrane can be probed biotinylated mucin. In addition we describe the use of novel mucin microarrays to assess bacterial interactions with mucins in a high throughput manner

Long-lived stops in MSSM scenarios with a neutralino LSP

This work investigates the possibility of a long-lived stop squark in supersymmetric models with the neutralino as the lightest supersymmetric particle (LSP). We study the implications of meta-stable stops on the sparticle mass spectra and the dark matter density. We find that in order to obtain a sufficiently long stop lifetime so as to be observable as a stable R-hadron at an LHC experiment, we need to fine tune the mass degeneracy between the stop and the LSP considerably. This increases the stop-neutralino coanihilation cross section, leaving the neutralino relic density lower than what is expected from the WMAP results for stop masses ~1.5 TeV/c^2. However, if such scenarios are realised in nature we demonstrate that the long-lived stops will be produced at the LHC and that stop-based R-hadrons with masses up to 1 TeV/c^2 can be detected after one year of running at design luminosity

Mechanism of active K + secretion by flounder urinary bladder

We investigated the mechanism of active K + transport by the urinary bladder of the winter flounder by measuring transepithelial properties in Ussing Chambers and by determining the cellular electrical potential profile using conventional microelectrodes. In the absence of transmural electrochemical potential gradients isolated bladders can exhibit a serosa-to-mucosa short circuit which is due entirely to net K + secretion. The properties of transcellular K + movement can be adequately described by a model which provides for active K + uptake across the basolateral membrane via an electrogenic Na/K ATPase and K + exit from the cell across the apical membrane down an electrochemical potential gradient via K + channels which are blocked by mucosal barium. The conductance of the apical membranes of the transporting cells appears to be due almost solely to K + while that of the basolateral membrane may be due largely to Cl − .Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/47455/1/424_2004_Article_BF00585048.pd