10 research outputs found

    Additional file 8: of Epigenome-wide analysis in newborn blood spots from monozygotic twins discordant for cerebral palsy reveals consistent regional differences in DNA methylation

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    Cross-platform validation of the two top DMRs, LTA and LIME1, between HM450 and EpiTYPER platforms. Pearson’s correlation coefficients for each probe are shown. The scale of both axes reflects a methylation value between 0 and 1 (β). The regression lines are shown in black. Based on the r value (correlation coefficient), correlations across both platforms are shown. The p-value indicates the significance of the correlation. (ZIP 126 kb

    Additional file 4: of Epigenome-wide analysis in newborn blood spots from monozygotic twins discordant for cerebral palsy reveals consistent regional differences in DNA methylation

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    MDS plots for preprocessed data. Samples are coloured based on chip location ranging from 1 to 3. The figure represents similarities between samples’ 1000 most variable probes based on Euclidean distance (sum of squared differences). Dimension 1 represents the largest variation in the dataset, and 2 and 3 are the second and third largest, respectively. (PDF 42 kb

    Additional file 3: of Epigenome-wide analysis in newborn blood spots from monozygotic twins discordant for cerebral palsy reveals consistent regional differences in DNA methylation

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    Heat map of the associations between the six largest principal components and specified covariates. The heat map provides a score of the strength of the association between DNA methylation (using M values) and each covariate, with positive and negative correlations ranging according to the magnitude (red positive, blue negative). The values in brackets for each association represent the p-value of the correlation. Of the six significant (p < 0.05) associations, all are weak (correlation < 0.6). Abbreviations: CP, cerebral palsy; PC, principal component; PIC, person in charge of performing DNA extraction; GA, gestational age; GMFCS, gross motor function classification system; Guthrie age, age in postnatal days when Guthrie card was made. (PDF 53 kb

    Additional file 1 of Colorectal cancer incidences in Lynch syndrome: a comparison of results from the prospective lynch syndrome database and the international mismatch repair consortium

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    Additional file 1
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