Salmon at River\u27s End: The Role of the Estuary in the Decline and Recovery of Columbia River salmon

The continued decline of Columbia River salmon (Oncorhynchus spp.) populations has long focused concerns on habitat changes upriver, particularly the effects of large hydroelectric dams. Increasing evidence that ocean conditions strongly influence salmon production, however, has raised questions about the importance of the estuarine environment to salmon and whether the hydropower system has affected estuarine-rearing habitats. In response to Northwest Power Planning Council recommendations, we initiated a review of what is known about the effects of the hydroelectric system on the hydrology, habitats, and ecology of the Columbia River estuary. Our goal was to develop recommendations for improving estuarine conditions or to identify research that may be needed before appropriate salmon-management changes can be defined. Our review and analyses addressed four major questions: (1) What habitats and processes support native salmon populations during the estuarine phase of their life cycle? (2) Have changes to the estuary had a significant role in salmon decline? (3) What have been the impacts of flow regulation on the hydrology, habitat, and biological interactions in the estuarine ecosystem? (4) What estuarine conditions are necessary to maintain salmonid diversity in the Columbia River basin

KELT-11b: A Highly Inflated Sub-Saturn Exoplanet Transiting the V=8 Subgiant HD 93396

We report the discovery of a transiting exoplanet, KELT-11b, orbiting the bright ($V=8.0$) subgiant HD 93396. A global analysis of the system shows that the host star is an evolved subgiant star with $T_{\rm eff} = 5370\pm51$ K, $M_{*} = 1.438_{-0.052}^{+0.061} M_{\odot}$, $R_{*} = 2.72_{-0.17}^{+0.21} R_{\odot}$, log $g_*= 3.727_{-0.046}^{+0.040}$, and [Fe/H]$= 0.180\pm0.075$. The planet is a low-mass gas giant in a $P = 4.736529\pm0.00006$ day orbit, with $M_{P} = 0.195\pm0.018 M_J$, $R_{P}= 1.37_{-0.12}^{+0.15} R_J$, $\rho_{P} = 0.093_{-0.024}^{+0.028}$ g cm$^{-3}$, surface gravity log ${g_{P}} = 2.407_{-0.086}^{+0.080}$, and equilibrium temperature $T_{eq} = 1712_{-46}^{+51}$ K. KELT-11 is the brightest known transiting exoplanet host in the southern hemisphere by more than a magnitude, and is the 6th brightest transit host to date. The planet is one of the most inflated planets known, with an exceptionally large atmospheric scale height (2763 km), and an associated size of the expected atmospheric transmission signal of 5.6%. These attributes make the KELT-11 system a valuable target for follow-up and atmospheric characterization, and it promises to become one of the benchmark systems for the study of inflated exoplanets.Comment: 15 pages, Submitted to AAS Journal

Salmon Life Histories, Habitat, and Food Webs in the Columbia River Estuary: An Overview of Research Results, 2002-2006.

From 2002 through 2006 we investigated historical and contemporary variations in juvenile Chinook salmon Oncorhynchus tshawytscha life histories, habitat associations, and food webs in the lower Columbia River estuary (mouth to rkm 101). At near-shore beach-seining sites in the estuary, Chinook salmon occurred during all months of the year, increasing in abundance from January through late spring or early summer and declining rapidly after July. Recently emerged fry dispersed throughout the estuary in early spring, and fry migrants were abundant in the estuary until April or May each year. Each spring, mean salmon size increased from the tidal freshwater zone to the estuary mouth; this trend may reflect estuarine growth and continued entry of smaller individuals from upriver. Most juvenile Chinook salmon in the mainstem estuary fed actively on adult insects and epibenthic amphipods Americorophium spp. Estimated growth rates of juvenile Chinook salmon derived from otolith analysis averaged 0.5 mm d-1, comparable to rates reported for juvenile salmon Oncorhynchus spp. in other Northwest estuaries. Estuarine salmon collections were composed of representatives from a diversity of evolutionarily significant units (ESUs) from the lower and upper Columbia Basin. Genetic stock groups in the estuary exhibited distinct seasonal and temporal abundance patterns, including a consistent peak in the Spring Creek Fall Chinook group in May, followed by a peak in the Western Cascades Fall Chinook group in July. The structure of acanthocephalan parasite assemblages in juvenile Chinook salmon from the tidal freshwater zone exhibited a consistent transition in June. This may have reflected changes in stock composition and associated habitat use and feeding histories. From March through July, subyearling Chinook salmon were among the most abundant species in all wetland habitat types (emergent, forested, and scrub/shrub) surveyed in the lower 100 km of the estuary. Salmon densities within wetland habitats fell to low levels by July, similar to the pattern observed at mainstem beach-seining sites and coincident with high water temperatures that approached or exceeded 19 C by mid-summer. Wetland habitats were used primarily by small subyearling Chinook salmon, with the smallest size ranges (i.e., rarely exceeding 70 mm by the end of the wetland rearing season) at scrub/shrub forested sites above rkm 50. Wetland sites of all types were utilized by a diversity of genetic stock groups, including less abundant groups such as Interior Summer/Fall Chinook

Correspondence between Scale Morphometrics and Scale and Otolith Chemistry for Interpreting Juvenile Salmon Life Histories

Fish scales have long been used to reconstruct fine-scale habitat transitions such as the movement of juvenile fish from freshwater, estuary, and ocean environments. Despite the importance of life history information to fisheries management and conservation, few studies have validated that scale morphology accurately describes fish movement between these habitats. Therefore, we tested the accuracy of using scale morphometric criteria to identify the movement of juvenile Chinook Salmon Oncorhynchus tshawytscha from freshwater to marine portions of the Columbia River estuary by comparing scale morphometric classification, scale chemistry, and otolith chemistry. Nearly one-half of all fish collected in the saline portion of the estuary and approximately one-quarter in the freshwater portion exhibited morphometric patterns (i.e., scale checks and intermediate growth) often associated with periods of estuary rearing. Depending upon the criteria used to define scale checks, otolith chemical results indicated that 33–53% of fish would have been misclassified as estuary residents based solely on their scale patterns. Moreover, many individuals who had resided in strontium-rich estuary water did not form a visible check (37%) on their scales to coincide with estuary entry. We estimated from otolith chemistry that these fish had either entered at or near the size at which scale formation occurs (35–42 mm) or had recently migrated to the saline portion of the estuary (<30 d) before new scale material could be formed and calcified. Scale chemistry alone was a good indicator of entrance into the saline portion of the estuary. Scale chemistry responded to the strontium-enriched salt water, and explained 86% of the variation found in otolith chemistry. Scale morphometric classification did not provide the fine-scale resolution that scale and, even more so, otolith chemistry provided for describing the proportion of juvenile Chinook salmon using the saline portion of the Columbia River estuary

Characterizing the Cool KOIs III. KOI-961: A Small Star with Large Proper Motion and Three Small Planets

We present the characterization of the star KOI 961, an M dwarf with transit signals indicative of three short-period exoplanets, originally discovered by the Kepler Mission. We proceed by comparing KOI 961 to Barnard's Star, a nearby, well-characterized mid-M dwarf. By comparing colors, optical and near-infrared spectra, we find remarkable agreement between the two, implying similar effective temperatures and metallicities. Both are metal-poor compared to the Solar neighborhood, have low projected rotational velocity, high absolute radial velocity, large proper motion and no quiescent H-alpha emission--all of which is consistent with being old M dwarfs. We combine empirical measurements of Barnard's Star and expectations from evolutionary isochrones to estimate KOI 961's mass (0.13 +/- 0.05 Msun), radius (0.17 +/- 0.04 Rsun) and luminosity (2.40 x 10^(-3.0 +/- 0.3) Lsun). We calculate KOI 961's distance (38.7 +/- 6.3 pc) and space motions, which, like Barnard's Star, are consistent with a high scale-height population in the Milky Way. We perform an independent multi-transit fit to the public Kepler light curve and significantly revise the transit parameters for the three planets. We calculate the false-positive probability for each planet-candidate, and find a less than 1% chance that any one of the transiting signals is due to a background or hierarchical eclipsing binary, validating the planetary nature of the transits. The best-fitting radii for all three planets are less than 1 Rearth, with KOI 961.03 being Mars-sized (Rp = 0.57 +/- 0.18 Rearth), and they represent some of the smallest exoplanets detected to date.Comment: Accepted to Ap

Why do models overestimate surface ozone in the Southeast United States?

Ozone pollution in the Southeast US involves complex chemistry driven by emissions of anthropogenic nitrogen oxide radicals (NOx ≡ NO+NO2) and biogenic isoprene. Model estimates of surface ozone concentrations tend to be biased high in the region and this is of concern for designing effective emission control strategies to meet air quality standards. We use detailed chemical observations from the SEAC4RS aircraft campaign in August and September 2013, interpreted with the GEOS-Chem chemical transport model at 0.25° × 0.3125° horizontal resolution, to better understand the factors controlling surface ozone in the Southeast US. We find that the National Emission Inventory (NEI) for NOx from the US Environmental Protection Agency (EPA) is too high. This finding is based on SEAC4RS observations of NOx and its oxidation products, surface network observations of nitrate wet deposition fluxes, and OMI satellite observations of tropospheric NO2 columns. Our results indicate that NEI NOx emissions from mobile and industrial sources must be reduced by 30-60%, dependent on the assumption of the contribution by soil NOx emissions. Upper-tropospheric NO2 from lightning makes a large contribution to satellite observations of tropospheric NO2 that must be accounted for when using these data to estimate surface NOx emissions. We find that only half of isoprene oxidation proceeds by the high-NOx pathway to produce ozone; this fraction is only moderately sensitive to changes in NOx emissions because isoprene and NOx emissions are spatially segregated. GEOS-Chem with reduced NOx emissions provides an unbiased simulation of ozone observations from the aircraft and reproduces the observed ozone production efficiency in the boundary layer as derived from a regression of ozone and NOx oxidation products. However, the model is still biased high by 6±14ppb relative to observed surface ozone in the Southeast US. Ozonesondes launched during midday hours show a 7ppb ozone decrease from 1.5km to the surface that GEOS-Chem does not capture. This bias may reflect a combination of excessive vertical mixing and net ozone production in the model boundary layer

Flight photon counting electron multiplying charge coupled device development for the Roman Space Telescope coronagraph instrument

We describe the development of flight electron multiplying charge coupled devices (EMCCDs) for the photon-counting camera system of a coronagraph instrument (CGI) to be flown on the 2.4-m Nancy Grace Roman Space Telescope. Roman is a NASA flagship mission that will study dark energy and dark matter, and search for exoplanets with a planned launch in the mid-2020s. The CGI is intended to demonstrate technologies required for high-contrast imaging and spectroscopy of exoplanets, such as high-speed wavefront sensing and pointing control, adaptive optics with deformable mirrors, and ultralow noise signal detection with photon counting, visible-sensitive (350 to 950 nm) detectors. The camera system is at the heart of these demonstrations and is required to sense both faint and bright targets (10−4 − 107 counts-s−1) adaptively at up to 1000 frames-s−1 to provide the necessary feedback to the instrument control loops. The system includes two identical cameras, one to demonstrate faint light scientific capability, and the other to provide high-speed real-time sensing of instrument pointing disturbances. Our program at the Jet Propulsion Laboratory (Pasadena, California, United States) has evaluated the low-signal performance of radiation-damaged commercial EMCCD sensors and used those measurements as a basis for targeted radiation hardening modifications developed in partnership with the Open University (Milton Keynes, United Kingdom) and Teledyne-e2v (Chelmsford, United Kingdom). A pair of EMCCDs with test features was then developed and their low signal performance is reported here. The program has resulted in the development of flight version of the EMCCD with low signal performance improved by more than a factor of three over the commercial one after exposure to 2.6 × 109 protons-cm−2 (10 MeV equivalent). The flight EMCCD sensors are contributed by ESA through a contract with Teledyne-e2v (Chelmsford, United Kingdom). We will describe the program requirements, sensor design, test results and metrics used to evaluate photon counting performance

Instrumentation and measurement strategy for the NOAA SENEX aircraft campaign as part of the Southeast Atmosphere Study 2013

Natural emissions of ozone-and-aerosol-precursor gases such as isoprene and monoterpenes are high in the southeastern US. In addition, anthropogenic emissions are significant in the southeastern US and summertime photochemistry is rapid. The NOAA-led SENEX (Southeast Nexus) aircraft campaign was one of the major components of the Southeast Atmosphere Study (SAS) and was focused on studying the interactions between biogenic and anthropogenic emissions to form secondary pollutants. During SENEX, the NOAA WP-3D aircraft conducted 20 research flights between 27 May and 10 July 2013 based out of Smyrna, TN. Here we describe the experimental approach, the science goals and early results of the NOAA SENEX campaign. The aircraft, its capabilities and standard measurements are described. The instrument payload is summarized including detection limits, accuracy, precision and time resolutions for all gas-and-aerosol phase instruments. The inter-comparisons of compounds measured with multiple instruments on the NOAA WP-3D are presented and were all within the stated uncertainties, except two of the three NO2 measurements. The SENEX flights included day- and nighttime flights in the southeastern US as well as flights over areas with intense shale gas extraction (Marcellus, Fayetteville and Haynesville shale). We present one example flight on 16 June 2013, which was a daytime flight over the Atlanta region, where several crosswind transects of plumes from the city and nearby point sources, such as power plants, paper mills and landfills, were flown. The area around Atlanta has large biogenic isoprene emissions, which provided an excellent case for studying the interactions between biogenic and anthropogenic emissions. In this example flight, chemistry in and outside the Atlanta plumes was observed for several hours after emission. The analysis of this flight showcases the strategies implemented to answer some of the main SENEX science questions.</p