5 research outputs found
Expansion of KPC-producing Enterobacterales in four large hospitals in Hanoi, Vietnam
Objectives
: The incidence of carbapenem resistance among nosocomial Gram-negative bacteria in Vietnam is high and increasing, including among Enterobacterales. In this study, we assessed the presence of one of the main carbapenemase genes, blaKPC, among carbapenem-resistant Enterobacterales (CRE) from four large hospitals in Hanoi, Vietnam, between 2010 and 2015, and described their key molecular characteristics.
Methods
: KPC-producing Enterobacterales were detected using conventional PCR and were further analysed using S1 nuclease pulsed-field gel electrophoresis (S1-PFGE), Southern blotting and whole-genome sequencing (WGS) for sequence typing and genetic characterisation.
Results
: blaKPC genes were detected in 122 (20.4%) of 599 CRE isolates. blaKPC-carrying plasmids were diverse in size. Klebsiella pneumoniae harbouring blaKPC genes belonged to ST15 and ST11, whereas KPC-producing Escherichia coli showed more diverse sequence types including ST3580, ST448, ST709 and ST405. Genotypic relationships supported the hypothesis of circulation of a population of ‘resident’ resistant bacteria in one hospital through the years and of transmission among these hospitals via patient transfer. WGS results revealed co-carriage of several other antimicrobial resistance genes and three different genetic contexts of blaKPC-2. Among these, the combination of ISEcp1–blaCTX-M and ISKpn27–blaKPC–ΔISKpn6 on the same plasmid is reported for the first time.
Conclusion
: We describe the dissemination of blaKPC-expressing Enterobacterales in four large hospitals in Hanoi, Vietnam, since 2010, which may have started earlier, along with their resistance patterns, sequence types, genotypic relationship, plasmid sizes and genetic context, thereby contributing to the overall picture of the antimicrobial resistance situation in Enterobacterales in Vietnam
Modeling of runoff water and runoff pesticide concentrations in upland bare soil using improved SPEC model
Fine root Production in Evergreen Broadleaved Forest, Northeast VietnamÂ
Estimating production of fi ne roots (diameter ≤ 2 mm) is signifi cant important to understand carbon cycle of forest ecosystem as it may contributes up to 70% of total net primary production. The estimation of fine root production is left behind in many parts, especially in developing countries including Vietnam. In this study, fi ne root production was estimated for tropical evergreen broadleaved forest in northeast of Vietnam using soil core sampling and litter bags by applying continuous infl ow method. Masses of live fine roots and of dead fi ne roots were collected in May and December 2014, and April 2015. ecomposition ratios of dead fi ne roots were estimated for May–December 2014 (summer/ growing season), and December 2014–May 2015 (winter). Results indicated that decomposition ratios were signifi cant different between summer (0.0022 day-1) and winter (0.0018 day-1). The difference of decomposition ratios resulted in difference of the fi ne root production (0.75 g m-2 d-1 in summer vs 0.35 g m-2 d-1 in winter). Throughout the year, fi ne root production in tropical evergreen broadleaved forest, northeast of Vietnam was 0.55 g m-2 d-1.</p
Monitoring fine root growth to identify optimal fertilization timing in a forest plantation: A case study in Northeast Vietnam.
Fertilizer is applied widely to improve the productivity of plantations. Traditionally, fertilization is conducted in spring and/or in the early rainy season, and it is believed to support the growth of planted trees in the growing season. Little attention to date has been paid on identification of the optimal timing of fertilization and fertilizer dose. In this study, application of the fine root monitoring technique in identifying optimal fertilization timing for an Acacia plantation in Vietnam is described. The study used two fertilizer doses (100 and 200 g NPK/tree) and three fertilization timings (in spring; in the early rainy season; and based on the fine root monitoring technique to identify when the fine roots reach their growth peak). As expected fertilization timings significantly affected growth and above-ground biomass (AGB) of the plantation. Fertilization based on the fine root monitoring technique resulted in the highest growths and AGB, followed by fertilization in the early rainy season and then in spring. Applying fertilizer at 200 g NPK/tree based on the fine root monitoring technique increased diameter at breast height (DBH) by 16%, stem height by 8%, crown diameter (Dc) by 16%, and AGB by 40% as compared to early rainy season fertilization. Increases of 32% DBH, 23% stem height, 44% Dc, and 87% AGB were found in fertilization based on fine root monitoring technique compared to spring fertilization. This study concluded that forest growers should use the fine root monitoring technique to identify optimal fertilization timing for higher productivity