Hepatitis B virus (HBV) infection amongst children in Senegal: current prevalence and seroprotection level

Introduction: hepatitis B virus (HBV) infection is highly endemic in Senegal. HBV vaccine of all children has been introduced in 1999 and included in the Expanded Programme on Immunization in 2004. The aim of this study was to assess the HBV prevalence and immunity status against HBV amongst children in Senegal. Methods: between March and August 2016, consecutive children aged from 6 months to 16 years old were recruited in outpatient department of three main children hospitals in Senegal. Serum samples were analyzed for HBV serology (HBsAg, HBcAb, HBsAb) using ARCHITECT analyzer. Children with HBsAb levels ≥ 10 IU/l) were considered as seroprotected against HBV. Results: during the study period, 295 children fulfilled the criteria for the study and were further analyzed. Three children were HBsAg positive giving a seroprevalence at 1.1% (95% CI: 0.2-3.3), 12/267 (4.5%, 95% CI=2.3-7.7) had positive HBcAb and 226/295 (76.6%, 71.4-81.3) had positive HBsAb including 191 (77.3%, 71.6-82.4) with isolated HBsAb related to previous active immunization. However only 165 children (56%, CI 50-62) had seroprotective HBsAb levels (HBsAb ≥ 10 UI/L) and 63 (21.4, 16.8-26) had a strong seroprotectiondefined by HBsAb ≥ 100 IU/L. Conclusion: our results suggest that although HBV prevalence has significantly decreased in children in Senegal following a better HBV vaccine coverage, the number of children correctly seroprotected is insufficient (56%). Assessing the levels of HBsAb and providing HBV vaccine boosters should be considered in children in Senegal

Phenotypic and Transcriptomic Response of Auxotrophic Mycobacterium avium Subsp. paratuberculosis leuD Mutant under Environmental Stress

Mycobacterium avium subsp. paratuberculosis (MAP) is the causative agent of severe gastroenteritis in cattle. To gain a better understanding of MAP virulence, we investigated the role of leuD gene in MAP metabolism and stress response. For this, we have constructed an auxotrophic strain of MAP by deleting the leuD gene using allelic exchange. The wildtype and mutant strains were then compared for metabolic phenotypic changes using Biolog phenotype microarrays. The responses of both strains to physiologically relevant stress conditions were assessed using DNA microarrays. Transcriptomic data was then analyzed in the context of cellular metabolic pathways and gene networks. Our results showed that deletion of leuD gene has a global effect on both MAP phenotypic and transcriptome response. At the metabolic level, the mutant strain lost the ability to utilize most of the carbon, nitrogen, sulphur, phosphorus and nutrient supplements as energy source. At the transcriptome level, more than 100 genes were differentially expressed in each of the stress condition tested. Systems level network analysis revealed that the differentially expressed genes were distributed throughout the gene network, thus explaining the global impact of leuD deletion in metabolic phenotype. Further, we find that leuD deletion impacted metabolic pathways associated with fatty acids. We verified this by experimentally estimating the total fatty acid content of both mutant and wildtype. The mutant strain had 30% less fatty acid content when compared to wildtype, thus supporting the results from transcriptional and computational analyses. Our results therefore reveal the intricate connection between the metabolism and virulence in MAP

Parasite interactions in the bioturbator Upogebia pusilla (Decapoda: Gebiidae): a case of amensalism?

The mud shrimp Upogebia pusilla is a deep-burrowing bioturbator widespread along the Northeast Atlantic and Mediterranean coasts, where it is recognized as an ecosystem engineer. Parasitism is an important factor impacting such species’ activities, and thus ecosystem functioning. At least two parasite species occur in U. pusilla: the bopyrid isopod Gyge branchialis and an undescribed trematode. This study, carried out in Arcachon Bay, France (44°40′N, 1°10′W), over 2 years (2014–2015), had two goals: (1) to identify the trematode occurring in U. pusilla and (2) to assess the interactions between the two parasites within their host. Using molecular techniques, the trematode was identified as Maritrema sp. (Microphallidae). Monthly samples taken over 2 years at a single site, and a ten-site spatial survey in June 2014 showed that there was a negative association in the occurrence of the two parasites in their host over time and amongst sites: bopyrid-infested mud shrimp harbored lower trematode infections compared to bopyrid-free individuals. In addition, the abundance of trematodes was lower in the bopyrid-infested gill compared to the uninfested gill of bopyrid-infested individuals. It suggests that G. branchialis interferes with Maritrema sp. establishment in the mud shrimp. Conversely, the trematode appeared not to have a negative effect on bopyrid presence. The reduction of Maritrema sp. infection by G. branchialis is mainly due to the alteration of U. pusilla fitness (indirect interaction), and to a lesser extent, to overlap of parasites’ niches (direct interaction). Accordingly, interactions between these two parasites can be classified as amensalism

ESX secretion systems: mycobacterial evolution to counter host immunity

International audienceMycobacterium tuberculosis uses sophisticated secretion systems, named 6 kDa early secretory antigenic target (ESAT6) protein family secretion (ESX) systems (also known as type VII secretion systems), to export a set of effector proteins that helps the pathogen to resist or evade the host immune response. Since the discovery of the esx loci during the M. tuberculosis H37Rv genome project, structural biology, cell biology and evolutionary analyses have advanced our knowledge of the function of these systems. In this Review, we highlight the intriguing roles that these studies have revealed for ESX systems in bacterial survival and pathogenicity during infection with M. tuberculosis. Furthermore, we discuss the diversity of ESX systems that has been described among mycobacteria and selected non-mycobacterial species. Finally, we consider how our knowledge of ESX systems might be applied to the development of novel strategies for the treatment and prevention of disease